RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 V9GY48 417 aaPredicted RBP10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 ESYT2A0FGR8 921 aa10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 DDTLA6NHG4 134 aaPredicted RBP10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 FZD9O00144 591 aa10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 TULP1O00294 542 aaPredicted RBP10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 SPTLC2O15270 562 aa10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 PARP1P09874 1014 aaKnown RBP10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 RBM5P52756 815 aaKnown RBP eCLIP10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 MAP3K10Q02779 954 aa10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 GNL2Q13823 731 aaKnown RBP10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 STK38Q15208 465 aa10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 PTPAQ15257 358 aa10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 NPY5RQ15761 445 aa10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 TMEM179Q6ZVK1 233 aa10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 CCDC148Q8NFR7 591 aa10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 TNFRSF25Q93038 417 aa10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 PRMT6Q96LA8 375 aaPredicted RBP10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 KANSL2Q9H9L4 492 aa10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 ZNF70Q9UC06 446 aaPredicted RBP10.21□□□□□ -0.77
LSM3P5-201ENST00000566307 BTBD18B2RXH4 712 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 CTAGE5O15320 804 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 PPFIA3O75145 1194 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 RAD17O75943 681 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 PDHBP11177 359 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 KRT2P35908 639 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 FOSBP53539 338 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 SLC4A8Q2Y0W8 1093 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 GPATCH4Q5T3I0 446 aaKnown RBP10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 GAS2L3Q86XJ1 694 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 TEX2Q8IWB9 1127 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 ZFPM1Q8IX07 1006 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 ENGASEQ8NFI3 743 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 CCDC12Q8WUD4 166 aaPredicted RBP10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 SHISA4Q96DD7 197 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 TSPYL2Q9H2G4 693 aaPredicted RBP10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 CLSTN2Q9H4D0 955 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 TDRD3Q9H7E2 651 aaKnown RBP10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 GRPEL1Q9HAV7 217 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 GJB4Q9NTQ9 266 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 GINM1Q9NU53 330 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 PCDHA7Q9UN72 937 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 CEP131Q9UPN4 1083 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 PCDHAC2Q9Y5I4 1007 aa10.2□□□□□ -0.78
LSM3P5-201ENST00000566307 DICER1Q9UPY3 1922 aaKnown RBP10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 CNTNAP1P78357 1384 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 KLRF2D3W0D1 207 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 UBE2Q2LH0YL09 131 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 CYTH3O43739 400 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 MYO1BO43795 1136 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 CMA1P23946 247 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 FAM160A1Q05DH4 1040 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 SLC35G1Q2M3R5 365 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 CERKLQ49MI3 558 aaPredicted RBP10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 AXDND1Q5T1B0 1012 aaPredicted RBP10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 PPP1R18Q6NYC8 613 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 ZNF467Q7Z7K2 595 aaPredicted RBP10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 ELOA2Q8IYF1 753 aaPredicted RBP10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 STAG2Q8N3U4 1231 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 GMCL1P1Q8NEA9 526 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 BICD2Q8TD16 824 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 DCAF4Q8WV16 495 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 MRPS27Q92552 414 aaKnown RBP10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 MS4A3Q96HJ5 214 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 FUCA2Q9BTY2 467 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 NUP62CLQ9H1M0 184 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 SPON1Q9HCB6 807 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 BARHL2Q9NY43 387 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 PGAP2Q9UHJ9 254 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 NOL7Q9UMY1 257 aaKnown RBP10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 CLIC4Q9Y696 253 aa10.19□□□□□ -0.78
LSM3P5-201ENST00000566307 MYH4Q9Y623 1939 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 SYCE3A1L190 88 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 POTEB2H3BUK9 544 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 M0R2N6 131 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 CUTAO60888 179 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 CAVIN2O95810 425 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 XRCC6P12956 609 aaKnown RBP eCLIP10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 LIG1P18858 919 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 ME1P48163 572 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 TOB1P50616 345 aaPredicted RBP10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 ZNF543Q08ER8 600 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 ORC2Q13416 577 aaPredicted RBP10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 TNFAIP1Q13829 316 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 SF3A1Q15459 793 aaKnown RBP10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 CCDC73Q6ZRK6 1079 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 CMTR1Q8N1G2 835 aaKnown RBP10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 CCDC82Q8N4S0 544 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 MTMR8Q96EF0 704 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 RRP36Q96EU6 259 aaKnown RBP10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 GMCL1Q96IK5 515 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 TIGD1Q96MW7 591 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 TRIM34Q9BYJ4 488 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 FTOQ9C0B1 505 aaKnown RBP eCLIP10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 ZMYND12Q9H0C1 365 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 TSPY26PQ9H489 355 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 VPS54Q9P1Q0 977 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 PCDHA4Q9UN74 947 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 KCNJ14Q9UNX9 436 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 BCS1LQ9Y276 419 aa10.18□□□□□ -0.78
LSM3P5-201ENST00000566307 STXBP3O00186 592 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms