RNA–Protein interactions for RNA: ENST00000565362.5

PDXDC1-211, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-211ENST00000565362 GOPCQ9HD26 462 aa12.85□□□□□ -0.35
PDXDC1-211ENST00000565362 FBXO28Q9NVF7 368 aa12.85□□□□□ -0.35
PDXDC1-211ENST00000565362 NYAP2Q9P242 653 aa12.85□□□□□ -0.35
PDXDC1-211ENST00000565362 PPP1R9AQ9ULJ8 1098 aa12.85□□□□□ -0.35
PDXDC1-211ENST00000565362 GREB1LQ9C091 1923 aaPredicted RBP12.85□□□□□ -0.35
PDXDC1-211ENST00000565362 IGKV6D-41A0A0C4DH26 115 aa12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 PATL2C9JE40 543 aaKnown RBP12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 RRP1P56182 461 aaKnown RBP12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 PLS1Q14651 629 aa12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 NCAPG2Q86XI2 1143 aa12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 RIOX2Q8IUF8 465 aa12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 IFNL3Q8IZI9 196 aa12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 REPS2Q8NFH8 660 aa12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 OTUD7AQ8TE49 926 aaPredicted RBP12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 MKNK2Q9HBH9 465 aa12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 SLC5A4Q9NY91 659 aa12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 ZNF214Q9UL59 606 aaPredicted RBP12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 ZMYND8Q9ULU4 1186 aaPredicted RBP12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 SALL3Q9BXA9 1300 aa12.84□□□□□ -0.35
PDXDC1-211ENST00000565362 PARP14Q460N5 1801 aa12.83□□□□□ -0.35
PDXDC1-211ENST00000565362 DNAH12Q6ZR08 3092 aa12.83□□□□□ -0.36
PDXDC1-211ENST00000565362 VWA5AO00534 786 aa12.83□□□□□ -0.36
PDXDC1-211ENST00000565362 LRRC26Q2I0M4 334 aa12.83□□□□□ -0.36
PDXDC1-211ENST00000565362 FAM83BQ5T0W9 1011 aa12.83□□□□□ -0.36
PDXDC1-211ENST00000565362 MKL1Q969V6 931 aa12.83□□□□□ -0.36
PDXDC1-211ENST00000565362 MAML3Q96JK9 1138 aa12.83□□□□□ -0.36
PDXDC1-211ENST00000565362 SEC62Q99442 399 aaKnown RBP12.83□□□□□ -0.36
PDXDC1-211ENST00000565362 F5H6K3 240 aa12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 DNM1LO00429 736 aa12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 SEPT4O43236 478 aa12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 FCER1AP12319 257 aa12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 CNGA1P29973 690 aa12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 STAT3P40763 770 aa12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 TDO2P48775 406 aa12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 KLRC3Q07444 240 aa12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 ZMYM1Q5SVZ6 1142 aa12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 ZNF287Q9HBT7 754 aa12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 SYNPO2Q9UMS6 1093 aa12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 DIS3Q9Y2L1 958 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-211ENST00000565362 NDUFB10O96000 172 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 SYN1P17600 705 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 MX1P20591 662 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 COPB2P35606 906 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 ZNF444Q8N0Y2 327 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 STK11IPQ8N1F8 1099 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 MMP19Q99542 508 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 SLF1Q9BQI6 1058 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 NACAP1Q9BZK3 213 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 SENP6Q9GZR1 1112 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 MTMR4Q9NYA4 1195 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 FRMPD3Q5JV73 1810 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 PLIN4Q96Q06 1357 aa12.81□□□□□ -0.36
PDXDC1-211ENST00000565362 SOX1O00570 391 aaPredicted RBP12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 ATP2A1O14983 1001 aa12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 PRDM1O75626 825 aa12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 APPP05067 770 aa12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 MAGEA10P43363 369 aaPredicted RBP12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 ZNF792Q3KQV3 632 aa12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 PRAMEF19Q5SWL8 479 aa12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 PRPF38AQ8NAV1 312 aaKnown RBP12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 ARRDC4Q8NCT1 418 aa12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 NEDD1Q8NHV4 660 aa12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 CEP95Q96GE4 821 aa12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 NUP88Q99567 741 aaPredicted RBP12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 CLIP2Q9UDT6 1046 aa12.8□□□□□ -0.36
PDXDC1-211ENST00000565362 FOXP2O15409 715 aa12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 RAD21O60216 631 aa12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 TTLL1O95922 423 aa12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 PDE4BQ07343 736 aa12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 PPARAQ07869 468 aa12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 KCTD2Q14681 263 aa12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 GMCL1P1Q8NEA9 526 aa12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 CRBNQ96SW2 442 aa12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 TINF2Q9BSI4 451 aa12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 TEX13BQ9BXU2 312 aa12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 NAPBQ9H115 298 aa12.79□□□□□ -0.36
PDXDC1-211ENST00000565362 COL11A1P12107 1806 aaPredicted RBP12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 ZNFX1Q9P2E3 1918 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 PGK2P07205 417 aa12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 LRIT3Q3SXY7 679 aa12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 GJC2Q5T442 439 aaPredicted RBP12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 ANKRD45Q5TZF3 282 aa12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 ANO1Q5XXA6 986 aa12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 GPR153Q6NV75 609 aa12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 TDHQ8IZJ6 230 aa12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 MSL3Q8N5Y2 521 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 LRCH3Q96II8 777 aa12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 SLC38A10Q9HBR0 1119 aa12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 FEM1BQ9UK73 627 aa12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 RIPK3Q9Y572 518 aa12.78□□□□□ -0.36
PDXDC1-211ENST00000565362 DNAJC25-GNG10A0A024R161 153 aa12.77□□□□□ -0.37
PDXDC1-211ENST00000565362 SLC3A2P08195 630 aaKnown RBP12.77□□□□□ -0.37
PDXDC1-211ENST00000565362 ZNF865P0CJ78 1059 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 542.8 ms