RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ZBTB40Q9NUA8 1239 aa16.98■□□□□ 0.31
CDR2-204ENST00000564542 NRBP1Q9UHY1 535 aa16.98■□□□□ 0.31
CDR2-204ENST00000564542 ADAMTS5Q9UNA0 930 aa16.98■□□□□ 0.31
CDR2-204ENST00000564542 ROBO3Q96MS0 1386 aa16.98■□□□□ 0.31
CDR2-204ENST00000564542 CYP2D7A0A087X1C5 515 aa16.97■□□□□ 0.31
CDR2-204ENST00000564542 SMIM22K7EJ46 135 aa16.97■□□□□ 0.31
CDR2-204ENST00000564542 UBE3CQ15386 1083 aa16.97■□□□□ 0.31
CDR2-204ENST00000564542 TRIM60Q495X7 471 aa16.97■□□□□ 0.31
CDR2-204ENST00000564542 FAM47AQ5JRC9 791 aa16.97■□□□□ 0.31
CDR2-204ENST00000564542 PRAMEF19Q5SWL8 479 aa16.97■□□□□ 0.31
CDR2-204ENST00000564542 C1orf53Q5VUE5 145 aa16.97■□□□□ 0.31
CDR2-204ENST00000564542 GUCD1Q96NT3 240 aa16.97■□□□□ 0.31
CDR2-204ENST00000564542 BCL11AQ9H165 835 aa16.97■□□□□ 0.31
CDR2-204ENST00000564542 PRDM5Q9NQX1 630 aaPredicted RBP16.97■□□□□ 0.31
CDR2-204ENST00000564542 PLXNA1Q9UIW2 1896 aa16.97■□□□□ 0.31
CDR2-204ENST00000564542 GREB1LQ9C091 1923 aaPredicted RBP16.96■□□□□ 0.31
CDR2-204ENST00000564542 ZNFX1Q9P2E3 1918 aaKnown RBP16.96■□□□□ 0.31
CDR2-204ENST00000564542 USP17L12C9JPN9 530 aa16.96■□□□□ 0.31
CDR2-204ENST00000564542 USP17L21D6R901 530 aa16.96■□□□□ 0.31
CDR2-204ENST00000564542 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
CDR2-204ENST00000564542 EEF2P13639 858 aaKnown RBP16.96■□□□□ 0.31
CDR2-204ENST00000564542 LRRC41Q15345 812 aa16.96■□□□□ 0.31
CDR2-204ENST00000564542 SAMD1Q6SPF0 538 aaPredicted RBP16.96■□□□□ 0.31
CDR2-204ENST00000564542 MMP19Q99542 508 aa16.96■□□□□ 0.31
CDR2-204ENST00000564542 KANSL2Q9H9L4 492 aa16.96■□□□□ 0.31
CDR2-204ENST00000564542 GOPCQ9HD26 462 aa16.96■□□□□ 0.31
CDR2-204ENST00000564542 PDLIM7Q9NR12 457 aa16.96■□□□□ 0.31
CDR2-204ENST00000564542 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
CDR2-204ENST00000564542 ADCYAP1R1P41586 468 aa16.95■□□□□ 0.3
CDR2-204ENST00000564542 ZNF697Q5TEC3 545 aa16.95■□□□□ 0.3
CDR2-204ENST00000564542 RIOX2Q8IUF8 465 aa16.95■□□□□ 0.3
CDR2-204ENST00000564542 MIER1Q8N108 512 aa16.95■□□□□ 0.3
CDR2-204ENST00000564542 FBXO28Q9NVF7 368 aa16.95■□□□□ 0.3
CDR2-204ENST00000564542 SLC4A4Q9Y6R1 1079 aa16.95■□□□□ 0.3
CDR2-204ENST00000564542 VWA5AO00534 786 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 CHGBP05060 677 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 RARBP10826 455 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 COPB2P35606 906 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 KCTD2Q14681 263 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 CTR9Q6PD62 1173 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 BADQ92934 168 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 FERMT2Q96AC1 680 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 TINF2Q9BSI4 451 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 CHMP4BQ9H444 224 aaKnown RBP16.94■□□□□ 0.3
CDR2-204ENST00000564542 XPNPEP3Q9NQH7 507 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 ARPP21Q9UBL0 812 aaPredicted RBP16.94■□□□□ 0.3
CDR2-204ENST00000564542 ZNF214Q9UL59 606 aaPredicted RBP16.94■□□□□ 0.3
CDR2-204ENST00000564542 PPP1R9AQ9ULJ8 1098 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 PHF24Q9UPV7 400 aa16.94■□□□□ 0.3
CDR2-204ENST00000564542 DIS3Q9Y2L1 958 aaKnown RBP16.94■□□□□ 0.3
CDR2-204ENST00000564542 PGK2P07205 417 aa16.93■□□□□ 0.3
CDR2-204ENST00000564542 STAT3P40763 770 aa16.93■□□□□ 0.3
CDR2-204ENST00000564542 SHHQ15465 462 aa16.93■□□□□ 0.3
CDR2-204ENST00000564542 ZNF792Q3KQV3 632 aa16.93■□□□□ 0.3
CDR2-204ENST00000564542 C9orf50Q5SZB4 431 aa16.93■□□□□ 0.3
CDR2-204ENST00000564542 ZSCAN25Q6NSZ9 544 aa16.93■□□□□ 0.3
CDR2-204ENST00000564542 REPS2Q8NFH8 660 aa16.93■□□□□ 0.3
CDR2-204ENST00000564542 FAM161BQ96MY7 647 aa16.93■□□□□ 0.3
CDR2-204ENST00000564542 PUS7LQ9H0K6 701 aaKnown RBP16.93■□□□□ 0.3
CDR2-204ENST00000564542 EYSQ5T1H1 3165 aa16.93■□□□□ 0.3
CDR2-204ENST00000564542 TRIM43BA6NCK2 446 aa16.92■□□□□ 0.3
CDR2-204ENST00000564542 FAM83BQ5T0W9 1011 aa16.92■□□□□ 0.3
CDR2-204ENST00000564542 SH3RF1Q7Z6J0 888 aa16.92■□□□□ 0.3
CDR2-204ENST00000564542 RNF180Q86T96 592 aa16.92■□□□□ 0.3
CDR2-204ENST00000564542 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.92■□□□□ 0.3
CDR2-204ENST00000564542 TRIM43Q96BQ3 446 aaPredicted RBP16.92■□□□□ 0.3
CDR2-204ENST00000564542 RAD21O60216 631 aa16.91■□□□□ 0.3
CDR2-204ENST00000564542 AKR1A1P14550 325 aa16.91■□□□□ 0.3
CDR2-204ENST00000564542 TLE2Q04725 743 aa16.91■□□□□ 0.3
CDR2-204ENST00000564542 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDR2-204ENST00000564542 LRRCC1Q9C099 1032 aa16.91■□□□□ 0.3
CDR2-204ENST00000564542 SMCHD1A6NHR9 2005 aa16.91■□□□□ 0.3
CDR2-204ENST00000564542 A0A1W2PQ45 241 aaPredicted RBP16.9■□□□□ 0.3
CDR2-204ENST00000564542 A0A1W2PQY0 241 aa16.9■□□□□ 0.3
CDR2-204ENST00000564542 PGK1P00558 417 aa16.9■□□□□ 0.3
CDR2-204ENST00000564542 CLTBP09497 229 aa16.9■□□□□ 0.3
CDR2-204ENST00000564542 ZNF865P0CJ78 1059 aaPredicted RBP16.9■□□□□ 0.3
CDR2-204ENST00000564542 TAL1P17542 331 aaPredicted RBP16.9■□□□□ 0.3
CDR2-204ENST00000564542 SMAD3P84022 425 aaKnown RBP16.9■□□□□ 0.3
CDR2-204ENST00000564542 SBK1Q52WX2 424 aa16.9■□□□□ 0.3
CDR2-204ENST00000564542 MSL3Q8N5Y2 521 aaKnown RBP16.9■□□□□ 0.3
CDR2-204ENST00000564542 SLF1Q9BQI6 1058 aa16.9■□□□□ 0.3
CDR2-204ENST00000564542 TEX13BQ9BXU2 312 aa16.9■□□□□ 0.3
CDR2-204ENST00000564542 CNPY2Q9Y2B0 182 aa16.9■□□□□ 0.3
CDR2-204ENST00000564542 TACC3Q9Y6A5 838 aa16.9■□□□□ 0.3
CDR2-204ENST00000564542 CDH23Q9H251 3354 aa16.9■□□□□ 0.3
CDR2-204ENST00000564542 ADAMTS4O75173 837 aa16.89■□□□□ 0.29
CDR2-204ENST00000564542 RASA1P20936 1047 aa16.89■□□□□ 0.29
CDR2-204ENST00000564542 GIMAP6Q6P9H5 292 aa16.89■□□□□ 0.29
CDR2-204ENST00000564542 STRBPQ96SI9 672 aaKnown RBP16.89■□□□□ 0.29
CDR2-204ENST00000564542 CDX2Q99626 313 aaPredicted RBP16.89■□□□□ 0.29
CDR2-204ENST00000564542 SYNGAP1Q96PV0 1343 aa16.89■□□□□ 0.29
CDR2-204ENST00000564542 KIAA0355O15063 1070 aa16.88■□□□□ 0.29
CDR2-204ENST00000564542 ITGB8P26012 769 aa16.88■□□□□ 0.29
CDR2-204ENST00000564542 SNRNP48Q6IEG0 339 aaKnown RBP16.88■□□□□ 0.29
CDR2-204ENST00000564542 LENG1Q96BZ8 264 aaPredicted RBP16.88■□□□□ 0.29
CDR2-204ENST00000564542 NUP88Q99567 741 aaPredicted RBP16.88■□□□□ 0.29
CDR2-204ENST00000564542 TSEN34Q9BSV6 310 aaKnown RBP16.88■□□□□ 0.29
CDR2-204ENST00000564542 COL25A1Q9BXS0 654 aaPredicted RBP16.88■□□□□ 0.29
CDR2-204ENST00000564542 SEMA6BQ9H3T3 888 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms