RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 ROBO3Q96MS0 1386 aa28.62■■■□□ 2.17
NME3-206ENST00000564252 RASA1P20936 1047 aa28.61■■■□□ 2.17
NME3-206ENST00000564252 SAMD1Q6SPF0 538 aaPredicted RBP28.61■■■□□ 2.17
NME3-206ENST00000564252 GOPCQ9HD26 462 aa28.61■■■□□ 2.17
NME3-206ENST00000564252 ZFYP08048 801 aaPredicted RBP28.6■■■□□ 2.17
NME3-206ENST00000564252 MAGEA10P43363 369 aaPredicted RBP28.6■■■□□ 2.17
NME3-206ENST00000564252 EPB41L4AQ9HCS5 686 aaPredicted RBP28.6■■■□□ 2.17
NME3-206ENST00000564252 GPAA1O43292 621 aa28.59■■■□□ 2.17
NME3-206ENST00000564252 SLC5A4Q9NY91 659 aa28.59■■■□□ 2.17
NME3-206ENST00000564252 PCDHB15Q9Y5E8 787 aa28.59■■■□□ 2.17
NME3-206ENST00000564252 MINDY4BA8MYZ0 360 aa28.58■■■□□ 2.17
NME3-206ENST00000564252 M0R2C6 588 aa28.58■■■□□ 2.17
NME3-206ENST00000564252 SLC25A27O95847 323 aa28.58■■■□□ 2.17
NME3-206ENST00000564252 FAM83BQ5T0W9 1011 aa28.58■■■□□ 2.17
NME3-206ENST00000564252 STK11IPQ8N1F8 1099 aa28.58■■■□□ 2.17
NME3-206ENST00000564252 LRCH3Q96II8 777 aa28.58■■■□□ 2.17
NME3-206ENST00000564252 SENP6Q9GZR1 1112 aaPredicted RBP28.58■■■□□ 2.17
NME3-206ENST00000564252 PPP1R9AQ9ULJ8 1098 aa28.58■■■□□ 2.17
NME3-206ENST00000564252 ZNFX1Q9P2E3 1918 aaKnown RBP28.57■■■□□ 2.16
NME3-206ENST00000564252 DNM1LO00429 736 aa28.57■■■□□ 2.16
NME3-206ENST00000564252 VWA5AO00534 786 aa28.57■■■□□ 2.16
NME3-206ENST00000564252 FCER1AP12319 257 aa28.57■■■□□ 2.16
NME3-206ENST00000564252 RIOX2Q8IUF8 465 aa28.57■■■□□ 2.16
NME3-206ENST00000564252 MAML3Q96JK9 1138 aa28.57■■■□□ 2.16
NME3-206ENST00000564252 MKNK2Q9HBH9 465 aa28.57■■■□□ 2.16
NME3-206ENST00000564252 TTC41PQ6P2S7 1318 aa28.57■■■□□ 2.16
NME3-206ENST00000564252 RAD21O60216 631 aa28.56■■■□□ 2.16
NME3-206ENST00000564252 GNAT2P19087 354 aa28.56■■■□□ 2.16
NME3-206ENST00000564252 REPS2Q8NFH8 660 aa28.56■■■□□ 2.16
NME3-206ENST00000564252 PI4K2BQ8TCG2 481 aa28.56■■■□□ 2.16
NME3-206ENST00000564252 NYAP2Q9P242 653 aa28.56■■■□□ 2.16
NME3-206ENST00000564252 ZNF214Q9UL59 606 aaPredicted RBP28.55■■■□□ 2.16
NME3-206ENST00000564252 SEPT4O43236 478 aa28.54■■■□□ 2.16
NME3-206ENST00000564252 TDO2P48775 406 aa28.54■■■□□ 2.16
NME3-206ENST00000564252 PRAMEF19Q5SWL8 479 aa28.54■■■□□ 2.16
NME3-206ENST00000564252 OTUD7AQ8TE49 926 aaPredicted RBP28.54■■■□□ 2.16
NME3-206ENST00000564252 MMP19Q99542 508 aa28.54■■■□□ 2.16
NME3-206ENST00000564252 NUP88Q99567 741 aaPredicted RBP28.54■■■□□ 2.16
NME3-206ENST00000564252 IGKV6D-41A0A0C4DH26 115 aa28.53■■■□□ 2.16
NME3-206ENST00000564252 STAT3P40763 770 aa28.53■■■□□ 2.16
NME3-206ENST00000564252 ANO1Q5XXA6 986 aa28.53■■■□□ 2.16
NME3-206ENST00000564252 PATL2C9JE40 543 aaKnown RBP28.52■■■□□ 2.16
NME3-206ENST00000564252 ERC2O15083 957 aa28.52■■■□□ 2.16
NME3-206ENST00000564252 LRRFIP1Q32MZ4 808 aaKnown RBP28.52■■■□□ 2.16
NME3-206ENST00000564252 GJC2Q5T442 439 aaPredicted RBP28.52■■■□□ 2.16
NME3-206ENST00000564252 TDHQ8IZJ6 230 aa28.52■■■□□ 2.16
NME3-206ENST00000564252 ARRDC4Q8NCT1 418 aa28.52■■■□□ 2.16
NME3-206ENST00000564252 SEC62Q99442 399 aaKnown RBP28.52■■■□□ 2.16
NME3-206ENST00000564252 MYH4Q9Y623 1939 aa28.51■■■□□ 2.16
NME3-206ENST00000564252 PLXNA1Q9UIW2 1896 aa28.51■■■□□ 2.15
NME3-206ENST00000564252 F5H6K3 240 aa28.51■■■□□ 2.15
NME3-206ENST00000564252 NDUFB10O96000 172 aa28.51■■■□□ 2.15
NME3-206ENST00000564252 APPP05067 770 aa28.51■■■□□ 2.15
NME3-206ENST00000564252 PGK2P07205 417 aa28.51■■■□□ 2.15
NME3-206ENST00000564252 ATN1P54259 1190 aaPredicted RBP28.51■■■□□ 2.15
NME3-206ENST00000564252 KLRC3Q07444 240 aa28.51■■■□□ 2.15
NME3-206ENST00000564252 IFNL3Q8IZI9 196 aa28.51■■■□□ 2.15
NME3-206ENST00000564252 SLF1Q9BQI6 1058 aa28.51■■■□□ 2.15
NME3-206ENST00000564252 UBE2OQ9C0C9 1292 aaKnown RBP28.51■■■□□ 2.15
NME3-206ENST00000564252 PRDM1O75626 825 aa28.5■■■□□ 2.15
NME3-206ENST00000564252 COPB2P35606 906 aa28.5■■■□□ 2.15
NME3-206ENST00000564252 KCTD2Q14681 263 aa28.5■■■□□ 2.15
NME3-206ENST00000564252 LRIT3Q3SXY7 679 aa28.5■■■□□ 2.15
NME3-206ENST00000564252 CLIP2Q9UDT6 1046 aa28.5■■■□□ 2.15
NME3-206ENST00000564252 MDM2Q00987 491 aaPredicted RBP28.49■■■□□ 2.15
NME3-206ENST00000564252 ZNF792Q3KQV3 632 aa28.49■■■□□ 2.15
NME3-206ENST00000564252 ZNF444Q8N0Y2 327 aaPredicted RBP28.49■■■□□ 2.15
NME3-206ENST00000564252 MKL1Q969V6 931 aa28.49■■■□□ 2.15
NME3-206ENST00000564252 ZNF287Q9HBT7 754 aa28.49■■■□□ 2.15
NME3-206ENST00000564252 DIS3Q9Y2L1 958 aaKnown RBP28.49■■■□□ 2.15
NME3-206ENST00000564252 COL6A3P12111 3177 aa28.49■■■□□ 2.15
NME3-206ENST00000564252 KBTBD13C9JR72 458 aa28.48■■■□□ 2.15
NME3-206ENST00000564252 RRP1P56182 461 aaKnown RBP28.48■■■□□ 2.15
NME3-206ENST00000564252 ZMYM1Q5SVZ6 1142 aa28.48■■■□□ 2.15
NME3-206ENST00000564252 CEP95Q96GE4 821 aa28.48■■■□□ 2.15
NME3-206ENST00000564252 TINF2Q9BSI4 451 aa28.48■■■□□ 2.15
NME3-206ENST00000564252 FSD1Q9BTV5 496 aa28.48■■■□□ 2.15
NME3-206ENST00000564252 MTMR4Q9NYA4 1195 aa28.48■■■□□ 2.15
NME3-206ENST00000564252 NRBP1Q9UHY1 535 aa28.48■■■□□ 2.15
NME3-206ENST00000564252 SALL3Q9BXA9 1300 aa28.47■■■□□ 2.15
NME3-206ENST00000564252 MX1P20591 662 aa28.47■■■□□ 2.15
NME3-206ENST00000564252 RTP1P59025 263 aa28.47■■■□□ 2.15
NME3-206ENST00000564252 FAM47AQ5JRC9 791 aa28.47■■■□□ 2.15
NME3-206ENST00000564252 PRPF38AQ8NAV1 312 aaKnown RBP28.47■■■□□ 2.15
NME3-206ENST00000564252 TEX13BQ9BXU2 312 aa28.47■■■□□ 2.15
NME3-206ENST00000564252 NACAP1Q9BZK3 213 aa28.47■■■□□ 2.15
NME3-206ENST00000564252 PLIN4Q96Q06 1357 aa28.47■■■□□ 2.15
NME3-206ENST00000564252 LRRC41Q15345 812 aa28.46■■■□□ 2.15
NME3-206ENST00000564252 GPR153Q6NV75 609 aa28.46■■■□□ 2.15
NME3-206ENST00000564252 SMCHD1A6NHR9 2005 aa28.46■■■□□ 2.15
NME3-206ENST00000564252 LAMA2P24043 3122 aaKnown RBP28.45■■■□□ 2.15
NME3-206ENST00000564252 SNRNP48Q6IEG0 339 aaKnown RBP28.45■■■□□ 2.14
NME3-206ENST00000564252 SLC39A5Q6ZMH5 540 aa28.45■■■□□ 2.14
NME3-206ENST00000564252 SYNPO2Q9UMS6 1093 aa28.45■■■□□ 2.14
NME3-206ENST00000564252 RIPK3Q9Y572 518 aa28.45■■■□□ 2.14
NME3-206ENST00000564252 ATP2A1O14983 1001 aa28.44■■■□□ 2.14
NME3-206ENST00000564252 TTLL1O95922 423 aa28.44■■■□□ 2.14
NME3-206ENST00000564252 TAL1P17542 331 aaPredicted RBP28.44■■■□□ 2.14
NME3-206ENST00000564252 NAPBQ9H115 298 aa28.44■■■□□ 2.14
NME3-206ENST00000564252 ATP11BQ9Y2G3 1177 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms