RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 AMIGO3Q86WK7 504 aa20.87■□□□□ 0.93
RAB40C-206ENST00000561781 CHPF2Q9P2E5 772 aa20.87■□□□□ 0.93
RAB40C-206ENST00000561781 FAM184BQ9ULE4 1060 aa20.87■□□□□ 0.93
RAB40C-206ENST00000561781 PPP1R12BO60237 982 aaPredicted RBP20.86■□□□□ 0.93
RAB40C-206ENST00000561781 PSMD2Q13200 908 aa20.86■□□□□ 0.93
RAB40C-206ENST00000561781 ANO1Q5XXA6 986 aa20.86■□□□□ 0.93
RAB40C-206ENST00000561781 CAPRIN2Q6IMN6 1127 aaKnown RBP20.86■□□□□ 0.93
RAB40C-206ENST00000561781 RPUSD2Q8IZ73 545 aaKnown RBP20.86■□□□□ 0.93
RAB40C-206ENST00000561781 LINC00116Q8NCU8 138 aa20.86■□□□□ 0.93
RAB40C-206ENST00000561781 ZNF473Q8WTR7 871 aaKnown RBP20.86■□□□□ 0.93
RAB40C-206ENST00000561781 GDAP1L1Q96MZ0 367 aa20.86■□□□□ 0.93
RAB40C-206ENST00000561781 CAMKK2Q96RR4 588 aa20.86■□□□□ 0.93
RAB40C-206ENST00000561781 CDC5LQ99459 802 aaKnown RBP20.86■□□□□ 0.93
RAB40C-206ENST00000561781 HOOK1Q9UJC3 728 aaKnown RBP20.86■□□□□ 0.93
RAB40C-206ENST00000561781 ANXA1P04083 346 aa20.86■□□□□ 0.93
RAB40C-206ENST00000561781 SYNE3Q6ZMZ3 975 aa20.86■□□□□ 0.93
RAB40C-206ENST00000561781 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.86■□□□□ 0.93
RAB40C-206ENST00000561781 CCDC121Q6ZUS5 278 aa20.86■□□□□ 0.93
RAB40C-206ENST00000561781 ZNF513Q8N8E2 541 aaPredicted RBP20.86■□□□□ 0.93
RAB40C-206ENST00000561781 C9orf78Q9NZ63 289 aaPredicted RBP20.86■□□□□ 0.93
RAB40C-206ENST00000561781 C5P01031 1676 aa20.86■□□□□ 0.93
RAB40C-206ENST00000561781 UBR2Q8IWV8 1755 aa20.85■□□□□ 0.93
RAB40C-206ENST00000561781 BMP6P22004 513 aa20.85■□□□□ 0.93
RAB40C-206ENST00000561781 G3BP1Q13283 466 aaKnown RBP eCLIP20.85■□□□□ 0.93
RAB40C-206ENST00000561781 SLMAPQ14BN4 828 aa20.85■□□□□ 0.93
RAB40C-206ENST00000561781 TAX1BP1Q86VP1 789 aa20.85■□□□□ 0.93
RAB40C-206ENST00000561781 AGXT2Q9BYV1 514 aa20.85■□□□□ 0.93
RAB40C-206ENST00000561781 HEG1Q9ULI3 1381 aa20.85■□□□□ 0.93
RAB40C-206ENST00000561781 BAG6P46379 1132 aa20.85■□□□□ 0.93
RAB40C-206ENST00000561781 IFT88Q13099 833 aa20.85■□□□□ 0.93
RAB40C-206ENST00000561781 FOXP4Q8IVH2 680 aaPredicted RBP20.85■□□□□ 0.93
RAB40C-206ENST00000561781 ZNF609O15014 1411 aa20.84■□□□□ 0.93
RAB40C-206ENST00000561781 LSP1P33241 339 aa20.84■□□□□ 0.93
RAB40C-206ENST00000561781 EXOSC10Q01780 885 aaKnown RBP20.84■□□□□ 0.93
RAB40C-206ENST00000561781 TBC1D25Q3MII6 688 aa20.84■□□□□ 0.93
RAB40C-206ENST00000561781 METTL16Q86W50 562 aaKnown RBP20.84■□□□□ 0.93
RAB40C-206ENST00000561781 CCDC47Q96A33 483 aaKnown RBP20.84■□□□□ 0.93
RAB40C-206ENST00000561781 C8orf76Q96K31 380 aa20.84■□□□□ 0.93
RAB40C-206ENST00000561781 NFE2L3Q9Y4A8 694 aa20.84■□□□□ 0.93
RAB40C-206ENST00000561781 SRRM3A6NNA2 597 aaPredicted RBP20.84■□□□□ 0.93
RAB40C-206ENST00000561781 ENO4A6NNW6 628 aa20.84■□□□□ 0.93
RAB40C-206ENST00000561781 ZNF18P17022 549 aa20.84■□□□□ 0.93
RAB40C-206ENST00000561781 C6orf89Q6UWU4 347 aa20.84■□□□□ 0.93
RAB40C-206ENST00000561781 AENQ8WTP8 325 aaKnown RBP20.84■□□□□ 0.93
RAB40C-206ENST00000561781 RUFY1Q96T51 708 aa20.84■□□□□ 0.93
RAB40C-206ENST00000561781 HPSEQ9Y251 543 aa20.84■□□□□ 0.93
RAB40C-206ENST00000561781 KIF28PB7ZC32 967 aa20.83■□□□□ 0.93
RAB40C-206ENST00000561781 PLSCR1O15162 318 aa20.83■□□□□ 0.93
RAB40C-206ENST00000561781 ABL1P00519 1130 aa20.83■□□□□ 0.93
RAB40C-206ENST00000561781 CKAP4Q07065 602 aaKnown RBP20.83■□□□□ 0.93
RAB40C-206ENST00000561781 ALS2CLQ60I27 953 aa20.83■□□□□ 0.93
RAB40C-206ENST00000561781 TRAPPC11Q7Z392 1133 aa20.83■□□□□ 0.93
RAB40C-206ENST00000561781 UBE3BQ7Z3V4 1068 aa20.83■□□□□ 0.93
RAB40C-206ENST00000561781 PPFIBP1Q86W92 1011 aa20.83■□□□□ 0.93
RAB40C-206ENST00000561781 RASSF8Q8NHQ8 419 aa20.83■□□□□ 0.93
RAB40C-206ENST00000561781 GJB4Q9NTQ9 266 aa20.83■□□□□ 0.93
RAB40C-206ENST00000561781 PCDHA5Q9Y5H7 936 aa20.83■□□□□ 0.93
RAB40C-206ENST00000561781 NDUFB9Q9Y6M9 179 aa20.83■□□□□ 0.93
RAB40C-206ENST00000561781 A1BGP04217 495 aa20.83■□□□□ 0.92
RAB40C-206ENST00000561781 CHST3Q7LGC8 479 aa20.83■□□□□ 0.92
RAB40C-206ENST00000561781 ZNF274Q96GC6 653 aaPredicted RBP20.83■□□□□ 0.92
RAB40C-206ENST00000561781 ZNF330Q9Y3S2 320 aaPredicted RBP20.83■□□□□ 0.92
RAB40C-206ENST00000561781 LY75O60449 1722 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 UTRNP46939 3433 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 AHCYL1O43865 530 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 SSBP05455 408 aaKnown RBP eCLIP20.82■□□□□ 0.92
RAB40C-206ENST00000561781 FMR1Q06787 632 aaKnown RBP eCLIP20.82■□□□□ 0.92
RAB40C-206ENST00000561781 SNX1Q13596 522 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 SHC4Q6S5L8 630 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 SPAG5Q96R06 1193 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 SLC39A2Q9NP94 309 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 FESP07332 822 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 CCDC70Q6NSX1 233 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 MIS18BP1Q6P0N0 1132 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 KDM7AQ6ZMT4 941 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 BZW1Q7L1Q6 419 aaKnown RBP20.82■□□□□ 0.92
RAB40C-206ENST00000561781 C3orf20Q8ND61 904 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 TRPC6Q9Y210 931 aa20.82■□□□□ 0.92
RAB40C-206ENST00000561781 TJP1Q07157 1748 aa20.81■□□□□ 0.92
RAB40C-206ENST00000561781 ERICH2A1L162 156 aa20.81■□□□□ 0.92
RAB40C-206ENST00000561781 MGRN1O60291 552 aa20.81■□□□□ 0.92
RAB40C-206ENST00000561781 RTN3O95197 1032 aaPredicted RBP20.81■□□□□ 0.92
RAB40C-206ENST00000561781 NR1I3Q14994 352 aa20.81■□□□□ 0.92
RAB40C-206ENST00000561781 SLC39A14Q15043 492 aa20.81■□□□□ 0.92
RAB40C-206ENST00000561781 ZNF827Q17R98 1081 aa20.81■□□□□ 0.92
RAB40C-206ENST00000561781 CPLX3Q8WVH0 158 aa20.81■□□□□ 0.92
RAB40C-206ENST00000561781 RUBCNQ92622 972 aa20.81■□□□□ 0.92
RAB40C-206ENST00000561781 CCT8L2Q96SF2 557 aa20.81■□□□□ 0.92
RAB40C-206ENST00000561781 OSBPL9Q96SU4 736 aa20.81■□□□□ 0.92
RAB40C-206ENST00000561781 EBF2Q9HAK2 575 aa20.81■□□□□ 0.92
RAB40C-206ENST00000561781 RBL2Q08999 1139 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 PROSER3Q2NL68 480 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 MCMDC2Q4G0Z9 681 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 NLRP14Q86W24 1093 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 TRMT44Q8IYL2 757 aaKnown RBP20.8■□□□□ 0.92
RAB40C-206ENST00000561781 BABAM1Q9NWV8 329 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 CORO1CQ9ULV4 474 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-206ENST00000561781 FAM107AO95990 144 aa20.8■□□□□ 0.92
RAB40C-206ENST00000561781 SNRPA1P09661 255 aaKnown RBP20.8■□□□□ 0.92
RAB40C-206ENST00000561781 XRCC4Q13426 336 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms