RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 TMEM132BQ14DG7 1078 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 WDR78Q5VTH9 848 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 Q7L0L9 218 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.12□□□□□ -0.79
PALB2-202ENST00000561514 DPP9Q86TI2 863 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 CLEC10AQ8IUN9 316 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 MIER1Q8N108 512 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 ARRDC4Q8NCT1 418 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 SLC17A8Q8NDX2 589 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 MAML3Q96JK9 1138 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.12□□□□□ -0.79
PALB2-202ENST00000561514 SENP6Q9GZR1 1112 aaPredicted RBP10.12□□□□□ -0.79
PALB2-202ENST00000561514 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.12□□□□□ -0.79
PALB2-202ENST00000561514 SLC5A4Q9NY91 659 aa10.12□□□□□ -0.79
PALB2-202ENST00000561514 DIS3Q9Y2L1 958 aaKnown RBP10.12□□□□□ -0.79
PALB2-202ENST00000561514 USP17L12C9JPN9 530 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 USP17L21D6R901 530 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 COPB2P35606 906 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 MDM2Q00987 491 aaPredicted RBP10.11□□□□□ -0.79
PALB2-202ENST00000561514 SLFNL1Q499Z3 407 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 SBK1Q52WX2 424 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 GIMAP6Q6P9H5 292 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 SLC39A5Q6ZMH5 540 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 RIOX2Q8IUF8 465 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 BOLA2Q9H3K6 86 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 CHMP4BQ9H444 224 aaKnown RBP10.11□□□□□ -0.79
PALB2-202ENST00000561514 KANSL2Q9H9L4 492 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 ZNF214Q9UL59 606 aaPredicted RBP10.11□□□□□ -0.79
PALB2-202ENST00000561514 PPP1R9AQ9ULJ8 1098 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 PHF24Q9UPV7 400 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 FRMPD3Q5JV73 1810 aa10.11□□□□□ -0.79
PALB2-202ENST00000561514 CYP2D7A0A087X1C5 515 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 DLL1O00548 723 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 ATP2A1O14983 1001 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 CHGBP05060 677 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 FCER1AP12319 257 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 EEF2P13639 858 aaKnown RBP10.1□□□□□ -0.79
PALB2-202ENST00000561514 CNGA1P29973 690 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 LRRC41Q15345 812 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 ZNF792Q3KQV3 632 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 FAM47AQ5JRC9 791 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 CTR9Q6PD62 1173 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 SPICE1Q8N0Z3 855 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 MSL3Q8N5Y2 521 aaKnown RBP10.1□□□□□ -0.79
PALB2-202ENST00000561514 GUCD1Q96NT3 240 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 PUS7LQ9H0K6 701 aaKnown RBP10.1□□□□□ -0.79
PALB2-202ENST00000561514 PDLIM7Q9NR12 457 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 ARPP21Q9UBL0 812 aaPredicted RBP10.1□□□□□ -0.79
PALB2-202ENST00000561514 SYNPO2Q9UMS6 1093 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 COG6Q9Y2V7 657 aa10.1□□□□□ -0.79
PALB2-202ENST00000561514 DNAH12Q6ZR08 3092 aa10.09□□□□□ -0.79
PALB2-202ENST00000561514 IGKV6D-41A0A0C4DH26 115 aa10.09□□□□□ -0.79
PALB2-202ENST00000561514 KBTBD13C9JR72 458 aa10.09□□□□□ -0.79
PALB2-202ENST00000561514 VWA5AO00534 786 aa10.09□□□□□ -0.79
PALB2-202ENST00000561514 ZNF865P0CJ78 1059 aaPredicted RBP10.09□□□□□ -0.79
PALB2-202ENST00000561514 ATN1P54259 1190 aaPredicted RBP10.09□□□□□ -0.79
PALB2-202ENST00000561514 GJC2Q5T442 439 aaPredicted RBP10.09□□□□□ -0.79
PALB2-202ENST00000561514 ZSCAN25Q6NSZ9 544 aa10.09□□□□□ -0.79
PALB2-202ENST00000561514 NCAPG2Q86XI2 1143 aa10.09□□□□□ -0.79
PALB2-202ENST00000561514 AMOTL1Q8IY63 956 aa10.09□□□□□ -0.79
PALB2-202ENST00000561514 STRBPQ96SI9 672 aaKnown RBP10.09□□□□□ -0.79
PALB2-202ENST00000561514 LBHD1Q9BQE6 289 aaPredicted RBP10.09□□□□□ -0.79
PALB2-202ENST00000561514 TINF2Q9BSI4 451 aa10.09□□□□□ -0.79
PALB2-202ENST00000561514 FBXO28Q9NVF7 368 aa10.09□□□□□ -0.79
PALB2-202ENST00000561514 NYAP2Q9P242 653 aa10.09□□□□□ -0.79
PALB2-202ENST00000561514 LAMA2P24043 3122 aaKnown RBP10.09□□□□□ -0.79
PALB2-202ENST00000561514 LTBP2Q14767 1821 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 GREB1LQ9C091 1923 aaPredicted RBP10.08□□□□□ -0.8
PALB2-202ENST00000561514 DNAJC25-GNG10A0A024R161 153 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 GSG1L2A8MUP6 293 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 APBB1O00213 710 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 ADAMTS4O75173 837 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 RASA1P20936 1047 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 STAT3P40763 770 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 TRIM60Q495X7 471 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 MAMDC4Q6UXC1 1216 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 DDRGK1Q96HY6 314 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 LRRCC1Q9C099 1032 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 ATP11BQ9Y2G3 1177 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 SLC4A4Q9Y6R1 1079 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 PLIN4Q96Q06 1357 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 UNC80Q8N2C7 3258 aa10.08□□□□□ -0.8
PALB2-202ENST00000561514 SPTBN5Q9NRC6 3674 aaKnown RBP10.08□□□□□ -0.8
PALB2-202ENST00000561514 SYNGAP1Q96PV0 1343 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 TRIM43BA6NCK2 446 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 KIAA0355O15063 1070 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 RARBP10826 455 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 DEKP35659 375 aaKnown RBP10.07□□□□□ -0.8
PALB2-202ENST00000561514 ADCYAP1R1P41586 468 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 SMAD3P84022 425 aaKnown RBP10.07□□□□□ -0.8
PALB2-202ENST00000561514 PLS1Q14651 629 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 KCTD2Q14681 263 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 PRAMEF19Q5SWL8 479 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 FAM83BQ5T0W9 1011 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 CCSAPQ6IQ19 270 aaPredicted RBP10.07□□□□□ -0.8
PALB2-202ENST00000561514 ZNF467Q7Z7K2 595 aaPredicted RBP10.07□□□□□ -0.8
PALB2-202ENST00000561514 KBTBD3Q8NAB2 608 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 OSBP2Q969R2 916 aa10.07□□□□□ -0.8
PALB2-202ENST00000561514 MKL1Q969V6 931 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms