RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 MCM9Q9NXL9 1143 aa8.95□□□□□ -0.98
ZEB1-223ENST00000561304 SEPT9Q9UHD8 586 aaPredicted RBP8.95□□□□□ -0.98
ZEB1-223ENST00000561304 C19orf81C9J6K1 198 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 POLR3DP05423 398 aaPredicted RBP8.94□□□□□ -0.98
ZEB1-223ENST00000561304 CCL5P13501 91 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 HOXD10P28358 340 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 HOXA7P31268 230 aaPredicted RBP8.94□□□□□ -0.98
ZEB1-223ENST00000561304 HERVK_113P62684 666 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 SEPT2Q15019 361 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 ABCB5Q2M3G0 1257 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 PRPF38BQ5VTL8 546 aaKnown RBP8.94□□□□□ -0.98
ZEB1-223ENST00000561304 TTC6Q86TZ1 520 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 UNC93B1Q9H1C4 597 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 ECHDC1Q9NTX5 307 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 GINM1Q9NU53 330 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 TMOD4Q9NZQ9 345 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 MORF4L1Q9UBU8 362 aa8.94□□□□□ -0.98
ZEB1-223ENST00000561304 RANBP2P49792 3224 aaKnown RBP8.93□□□□□ -0.98
ZEB1-223ENST00000561304 A0A1W2PRG0 241 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 ADCY3O60266 1144 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 CNMDO75829 334 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 INHAP05111 366 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 VCAM1P19320 739 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 GCLCP48506 637 aaPredicted RBP8.93□□□□□ -0.98
ZEB1-223ENST00000561304 IRX3P78415 501 aaPredicted RBP8.93□□□□□ -0.98
ZEB1-223ENST00000561304 TRIM32Q13049 653 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 PABPC4Q13310 644 aaKnown RBP eCLIP8.93□□□□□ -0.98
ZEB1-223ENST00000561304 HIC1Q14526 733 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 UBE3CQ15386 1083 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 Q3C1V9 767 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 KIAA1755Q5JYT7 1200 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 USP17L2Q6R6M4 530 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 C12orf42Q96LP6 360 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.93□□□□□ -0.98
ZEB1-223ENST00000561304 RBPJLQ9UBG7 517 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 SZT2Q5T011 3432 aa8.93□□□□□ -0.98
ZEB1-223ENST00000561304 SALL3Q9BXA9 1300 aa8.92□□□□□ -0.98
ZEB1-223ENST00000561304 LAMA4Q16363 1823 aa8.92□□□□□ -0.98
ZEB1-223ENST00000561304 AKR1B1P15121 316 aa8.92□□□□□ -0.98
ZEB1-223ENST00000561304 IRF5Q13568 498 aa8.92□□□□□ -0.98
ZEB1-223ENST00000561304 PI4K2BQ8TCG2 481 aa8.92□□□□□ -0.98
ZEB1-223ENST00000561304 OSBP2Q969R2 916 aa8.92□□□□□ -0.98
ZEB1-223ENST00000561304 FEZ1Q99689 392 aa8.92□□□□□ -0.98
ZEB1-223ENST00000561304 PORCNQ9H237 461 aa8.92□□□□□ -0.98
ZEB1-223ENST00000561304 GJD2Q9UKL4 321 aa8.92□□□□□ -0.98
ZEB1-223ENST00000561304 MCM3APO60318 1980 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 SOWAHBA6NEL2 793 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 USP17L12C9JPN9 530 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 USP17L21D6R901 530 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 M0R2C6 588 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 MPHOSPH10O00566 681 aaKnown RBP8.91□□□□□ -0.98
ZEB1-223ENST00000561304 GJA8P48165 433 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 ERVK-9P63128 1117 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 ERVK-24P63145 666 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 C12orf60Q5U649 245 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 CTR9Q6PD62 1173 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 NUDT18Q6ZVK8 323 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 C16orf86Q6ZW13 317 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 UBE2Q1Q7Z7E8 422 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 SIAH1Q8IUQ4 282 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 KBTBD3Q8NAB2 608 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 COA7Q96BR5 231 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 PAGR1Q9BTK6 254 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 KIAA1683Q9H0B3 1180 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 RNF208Q9H0X6 261 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 RPAP3Q9H6T3 665 aaPredicted RBP8.91□□□□□ -0.98
ZEB1-223ENST00000561304 EPB41L4AQ9HCS5 686 aaPredicted RBP8.91□□□□□ -0.98
ZEB1-223ENST00000561304 ATP8A2Q9NTI2 1148 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 BIN2Q9UBW5 565 aaPredicted RBP8.91□□□□□ -0.98
ZEB1-223ENST00000561304 SLC4A4Q9Y6R1 1079 aa8.91□□□□□ -0.98
ZEB1-223ENST00000561304 CEP290O15078 2479 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 LAMA2P24043 3122 aaKnown RBP8.9□□□□□ -0.98
ZEB1-223ENST00000561304 GSG1L2A8MUP6 293 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 GJB1P08034 283 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 CDK8P49336 464 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 UBXN2AP68543 259 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 CATSPERGQ6ZRH7 1159 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 GPIHBP1Q8IV16 184 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 GPRC5AQ8NFJ5 357 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 PXYLP1Q8TE99 480 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 U2AF1L4Q8WU68 220 aaKnown RBP8.9□□□□□ -0.98
ZEB1-223ENST00000561304 TRIB2Q92519 343 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 STRBPQ96SI9 672 aaKnown RBP8.9□□□□□ -0.98
ZEB1-223ENST00000561304 SEC62Q99442 399 aaKnown RBP8.9□□□□□ -0.98
ZEB1-223ENST00000561304 CABP5Q9NP86 173 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 PAK6Q9NQU5 681 aaPredicted RBP8.9□□□□□ -0.98
ZEB1-223ENST00000561304 BTBD7Q9P203 1132 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 ROBO3Q96MS0 1386 aa8.9□□□□□ -0.98
ZEB1-223ENST00000561304 SMCHD1A6NHR9 2005 aa8.9□□□□□ -0.99
ZEB1-223ENST00000561304 LCTP09848 1927 aa8.89□□□□□ -0.99
ZEB1-223ENST00000561304 USP17L15C9J2P7 530 aa8.89□□□□□ -0.99
ZEB1-223ENST00000561304 USP17L13C9JLJ4 530 aa8.89□□□□□ -0.99
ZEB1-223ENST00000561304 USP17L11C9JVI0 530 aa8.89□□□□□ -0.99
ZEB1-223ENST00000561304 USP17L18D6R9N7 530 aa8.89□□□□□ -0.99
ZEB1-223ENST00000561304 USP17L22D6RA61 530 aa8.89□□□□□ -0.99
ZEB1-223ENST00000561304 USP17L17D6RBQ6 530 aa8.89□□□□□ -0.99
ZEB1-223ENST00000561304 USP17L19D6RCP7 530 aa8.89□□□□□ -0.99
ZEB1-223ENST00000561304 USP17L20D6RJB6 530 aa8.89□□□□□ -0.99
ZEB1-223ENST00000561304 C3orf80F5H4A9 247 aa8.89□□□□□ -0.99
ZEB1-223ENST00000561304 SMAPO00193 183 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms