RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 MX1P20591 662 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 ADD2P35612 726 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 COG2Q14746 738 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 DPP9Q86TI2 863 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 CLEC10AQ8IUN9 316 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 AMOTL1Q8IY63 956 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 TRPV1Q8NER1 839 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.88□□□□□ -0.35
TPM1-227ENST00000560970 ARMT1Q9H993 441 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 ATP8A2Q9NTI2 1148 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 HOXC10Q9NYD6 342 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 GBF1Q92538 1859 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 DLL1O00548 723 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 ATN1P54259 1190 aaPredicted RBP12.87□□□□□ -0.35
TPM1-227ENST00000560970 RTP1P59025 263 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 NUCB1Q02818 461 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 ABRAQ8N0Z2 381 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 ATG4CQ96DT6 458 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 MROH8Q9H579 483 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 VCPKMTQ9H867 229 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 MTMR10Q9NXD2 777 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 SLC5A4Q9NY91 659 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 PRKAG2Q9UGJ0 569 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 TMX2Q9Y320 296 aa12.87□□□□□ -0.35
TPM1-227ENST00000560970 LCTP09848 1927 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 SEPT4O43236 478 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 AKR1B1P15121 316 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 DSG3P32926 999 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 PDE1AP54750 535 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 PLS1Q14651 629 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 CHD1LQ86WJ1 897 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 NCAPG2Q86XI2 1143 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 SPICE1Q8N0Z3 855 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 KBTBD3Q8NAB2 608 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 ARRDC4Q8NCT1 418 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 DYNLL2Q96FJ2 89 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 DDRGK1Q96HY6 314 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 PRUNE2Q8WUY3 3088 aa12.86□□□□□ -0.35
TPM1-227ENST00000560970 A0A0C4DFX4 3053 aa12.85□□□□□ -0.35
TPM1-227ENST00000560970 ERC2O15083 957 aa12.85□□□□□ -0.35
TPM1-227ENST00000560970 SNX17Q15036 470 aa12.85□□□□□ -0.35
TPM1-227ENST00000560970 GJC2Q5T442 439 aaPredicted RBP12.85□□□□□ -0.35
TPM1-227ENST00000560970 C16orf86Q6ZW13 317 aa12.85□□□□□ -0.35
TPM1-227ENST00000560970 MAML3Q96JK9 1138 aa12.85□□□□□ -0.35
TPM1-227ENST00000560970 CCDC17Q96LX7 622 aa12.85□□□□□ -0.35
TPM1-227ENST00000560970 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
TPM1-227ENST00000560970 ATP11BQ9Y2G3 1177 aa12.85□□□□□ -0.35
TPM1-227ENST00000560970 PRKAB2O43741 272 aa12.84□□□□□ -0.35
TPM1-227ENST00000560970 COBLO75128 1261 aa12.84□□□□□ -0.35
TPM1-227ENST00000560970 SLC25A27O95847 323 aa12.84□□□□□ -0.35
TPM1-227ENST00000560970 FCER1AP12319 257 aa12.84□□□□□ -0.35
TPM1-227ENST00000560970 PDE4AP27815 886 aa12.84□□□□□ -0.35
TPM1-227ENST00000560970 FAM47AQ5JRC9 791 aa12.84□□□□□ -0.35
TPM1-227ENST00000560970 C12orf60Q5U649 245 aa12.84□□□□□ -0.35
TPM1-227ENST00000560970 ANO1Q5XXA6 986 aa12.84□□□□□ -0.35
TPM1-227ENST00000560970 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
TPM1-227ENST00000560970 PRDM5Q9NQX1 630 aaPredicted RBP12.84□□□□□ -0.35
TPM1-227ENST00000560970 ARPP21Q9UBL0 812 aaPredicted RBP12.84□□□□□ -0.35
TPM1-227ENST00000560970 CYP2D7A0A087X1C5 515 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 COPB2P35606 906 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 CDK8P49336 464 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 TMEM132BQ14DG7 1078 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 UBE3CQ15386 1083 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 TRIM60Q495X7 471 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 ZNF697Q5TEC3 545 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 FAM109BQ6ICB4 259 aaPredicted RBP12.83□□□□□ -0.36
TPM1-227ENST00000560970 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
TPM1-227ENST00000560970 PLEKHM2Q8IWE5 1019 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 MMP19Q99542 508 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 PUS7LQ9H0K6 701 aaKnown RBP12.83□□□□□ -0.36
TPM1-227ENST00000560970 PDLIM7Q9NR12 457 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 NRBP1Q9UHY1 535 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 LAMA4Q16363 1823 aa12.83□□□□□ -0.36
TPM1-227ENST00000560970 USP17L12C9JPN9 530 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 USP17L21D6R901 530 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
TPM1-227ENST00000560970 EEF2P13639 858 aaKnown RBP12.82□□□□□ -0.36
TPM1-227ENST00000560970 LRRC41Q15345 812 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 SLC39A5Q6ZMH5 540 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 RIOX2Q8IUF8 465 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 SIAH1Q8IUQ4 282 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 OSBP2Q969R2 916 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 GUCD1Q96NT3 240 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 KANSL2Q9H9L4 492 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 XPNPEP3Q9NQH7 507 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 ZNF214Q9UL59 606 aaPredicted RBP12.82□□□□□ -0.36
TPM1-227ENST00000560970 PPP1R9AQ9ULJ8 1098 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 ADAMTS5Q9UNA0 930 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 SLC4A4Q9Y6R1 1079 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 TANC1Q9C0D5 1861 aa12.82□□□□□ -0.36
TPM1-227ENST00000560970 SMIM22K7EJ46 135 aa12.81□□□□□ -0.36
TPM1-227ENST00000560970 M0R2C6 588 aa12.81□□□□□ -0.36
TPM1-227ENST00000560970 RNF113AO15541 343 aaKnown RBP12.81□□□□□ -0.36
TPM1-227ENST00000560970 NEFLP07196 543 aa12.81□□□□□ -0.36
TPM1-227ENST00000560970 RARBP10826 455 aa12.81□□□□□ -0.36
TPM1-227ENST00000560970 KCTD2Q14681 263 aa12.81□□□□□ -0.36
TPM1-227ENST00000560970 C1orf53Q5VUE5 145 aa12.81□□□□□ -0.36
TPM1-227ENST00000560970 APPBP2Q92624 585 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms