RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 UBXN2AP68543 259 aa17.56■□□□□ 0.4
IDH3A-219ENST00000560414 NUCB1Q02818 461 aa17.56■□□□□ 0.4
IDH3A-219ENST00000560414 NBR1Q14596 966 aa17.56■□□□□ 0.4
IDH3A-219ENST00000560414 CHD1LQ86WJ1 897 aa17.56■□□□□ 0.4
IDH3A-219ENST00000560414 SPICE1Q8N0Z3 855 aa17.56■□□□□ 0.4
IDH3A-219ENST00000560414 PXYLP1Q8TE99 480 aa17.56■□□□□ 0.4
IDH3A-219ENST00000560414 GTF3C2Q8WUA4 911 aaPredicted RBP17.56■□□□□ 0.4
IDH3A-219ENST00000560414 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.56■□□□□ 0.4
IDH3A-219ENST00000560414 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
IDH3A-219ENST00000560414 TMX2Q9Y320 296 aa17.56■□□□□ 0.4
IDH3A-219ENST00000560414 RABGAP1Q9Y3P9 1069 aa17.56■□□□□ 0.4
IDH3A-219ENST00000560414 SPDYE16A6NNV3 312 aaPredicted RBP17.55■□□□□ 0.4
IDH3A-219ENST00000560414 PRDM1O75626 825 aa17.55■□□□□ 0.4
IDH3A-219ENST00000560414 INHAP05111 366 aa17.55■□□□□ 0.4
IDH3A-219ENST00000560414 CCAR1Q8IX12 1150 aaKnown RBP17.55■□□□□ 0.4
IDH3A-219ENST00000560414 NACAP1Q9BZK3 213 aa17.55■□□□□ 0.4
IDH3A-219ENST00000560414 TANGO6Q9C0B7 1094 aa17.55■□□□□ 0.4
IDH3A-219ENST00000560414 RNF208Q9H0X6 261 aa17.55■□□□□ 0.4
IDH3A-219ENST00000560414 UNC93B1Q9H1C4 597 aa17.55■□□□□ 0.4
IDH3A-219ENST00000560414 KANSL2Q9H9L4 492 aa17.55■□□□□ 0.4
IDH3A-219ENST00000560414 BTBD7Q9P203 1132 aa17.55■□□□□ 0.4
IDH3A-219ENST00000560414 RBBP6Q7Z6E9 1792 aaKnown RBP17.55■□□□□ 0.4
IDH3A-219ENST00000560414 ROBO3Q96MS0 1386 aa17.54■□□□□ 0.4
IDH3A-219ENST00000560414 FOXP2O15409 715 aa17.54■□□□□ 0.4
IDH3A-219ENST00000560414 CYP2B6P20813 491 aa17.54■□□□□ 0.4
IDH3A-219ENST00000560414 MAPK4P31152 587 aa17.54■□□□□ 0.4
IDH3A-219ENST00000560414 PPP1R15BQ5SWA1 713 aa17.54■□□□□ 0.4
IDH3A-219ENST00000560414 PLEKHM2Q8IWE5 1019 aa17.54■□□□□ 0.4
IDH3A-219ENST00000560414 NAPBQ9H115 298 aa17.54■□□□□ 0.4
IDH3A-219ENST00000560414 SH2D4AQ9H788 454 aa17.54■□□□□ 0.4
IDH3A-219ENST00000560414 VCPKMTQ9H867 229 aa17.54■□□□□ 0.4
IDH3A-219ENST00000560414 TRIM6-TRIM34B2RNG4 842 aa17.53■□□□□ 0.4
IDH3A-219ENST00000560414 COG2Q14746 738 aa17.53■□□□□ 0.4
IDH3A-219ENST00000560414 VPS53Q5VIR6 699 aa17.53■□□□□ 0.4
IDH3A-219ENST00000560414 LBX2Q6XYB7 198 aa17.53■□□□□ 0.4
IDH3A-219ENST00000560414 GPR142Q7Z601 462 aa17.53■□□□□ 0.4
IDH3A-219ENST00000560414 LPAR1Q92633 364 aa17.53■□□□□ 0.4
IDH3A-219ENST00000560414 SHISA4Q96DD7 197 aa17.53■□□□□ 0.4
IDH3A-219ENST00000560414 FAM227BQ96M60 508 aa17.53■□□□□ 0.4
IDH3A-219ENST00000560414 A0A0D9SFI3 127 aa17.52■□□□□ 0.4
IDH3A-219ENST00000560414 C2orf72A6NCS6 295 aa17.52■□□□□ 0.4
IDH3A-219ENST00000560414 RAD21O60216 631 aa17.52■□□□□ 0.4
IDH3A-219ENST00000560414 GJB1P08034 283 aa17.52■□□□□ 0.4
IDH3A-219ENST00000560414 PPARAQ07869 468 aa17.52■□□□□ 0.4
IDH3A-219ENST00000560414 TRIM32Q13049 653 aa17.52■□□□□ 0.4
IDH3A-219ENST00000560414 WDR78Q5VTH9 848 aa17.52■□□□□ 0.4
IDH3A-219ENST00000560414 PLEKHH3Q7Z736 793 aa17.52■□□□□ 0.4
IDH3A-219ENST00000560414 ZNF444Q8N0Y2 327 aaPredicted RBP17.52■□□□□ 0.4
IDH3A-219ENST00000560414 RILPL2Q969X0 211 aa17.52■□□□□ 0.4
IDH3A-219ENST00000560414 NUDT12Q9BQG2 462 aa17.52■□□□□ 0.4
IDH3A-219ENST00000560414 HOXC10Q9NYD6 342 aa17.52■□□□□ 0.4
IDH3A-219ENST00000560414 PLXNB2O15031 1838 aa17.51■□□□□ 0.39
IDH3A-219ENST00000560414 FLOT1O75955 427 aa17.51■□□□□ 0.39
IDH3A-219ENST00000560414 CCNA1P78396 465 aa17.51■□□□□ 0.39
IDH3A-219ENST00000560414 DSG2Q14126 1118 aa17.51■□□□□ 0.39
IDH3A-219ENST00000560414 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
IDH3A-219ENST00000560414 HELLSQ9NRZ9 838 aa17.51■□□□□ 0.39
IDH3A-219ENST00000560414 WDR46O15213 610 aaKnown RBP17.5■□□□□ 0.39
IDH3A-219ENST00000560414 HMGCRP04035 888 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 GJA8P48165 433 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 FOXK1P85037 733 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 NMIQ13287 307 aaPredicted RBP17.5■□□□□ 0.39
IDH3A-219ENST00000560414 MORN1Q5T089 497 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 U2AF1L4Q8WU68 220 aaKnown RBP17.5■□□□□ 0.39
IDH3A-219ENST00000560414 SOCS4Q8WXH5 440 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 TRIB2Q92519 343 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 USP6NLQ92738 828 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 ATG4CQ96DT6 458 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 OSBPL3Q9H4L5 887 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 GOPCQ9HD26 462 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 INCENPQ9NQS7 918 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 FBXO28Q9NVF7 368 aa17.5■□□□□ 0.39
IDH3A-219ENST00000560414 IGKV6D-41A0A0C4DH26 115 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 CTDSPL2Q05D32 466 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 PDE4BQ07343 736 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 CCL14Q16627 93 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 MCMDC2Q4G0Z9 681 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 FAM47AQ5JRC9 791 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 FAM83BQ5T0W9 1011 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 ZNF589Q86UQ0 364 aaPredicted RBP17.49■□□□□ 0.39
IDH3A-219ENST00000560414 NKX2-3Q8TAU0 364 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 DEFB118Q96PH6 123 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 NUP88Q99567 741 aaPredicted RBP17.49■□□□□ 0.39
IDH3A-219ENST00000560414 MOV10L1Q9BXT6 1211 aaKnown RBP17.49■□□□□ 0.39
IDH3A-219ENST00000560414 ZNF287Q9HBT7 754 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 NYAP2Q9P242 653 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 CLIP2Q9UDT6 1046 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 RLFQ13129 1914 aa17.49■□□□□ 0.39
IDH3A-219ENST00000560414 GREB1LQ9C091 1923 aaPredicted RBP17.49■□□□□ 0.39
IDH3A-219ENST00000560414 SGPL1O95470 568 aa17.48■□□□□ 0.39
IDH3A-219ENST00000560414 SLC3A2P08195 630 aaKnown RBP17.48■□□□□ 0.39
IDH3A-219ENST00000560414 XRCC5P13010 732 aaKnown RBP17.48■□□□□ 0.39
IDH3A-219ENST00000560414 TMEM92Q6UXU6 159 aa17.48■□□□□ 0.39
IDH3A-219ENST00000560414 CEP95Q96GE4 821 aa17.48■□□□□ 0.39
IDH3A-219ENST00000560414 SPATC1LQ9H0A9 340 aa17.48■□□□□ 0.39
IDH3A-219ENST00000560414 TACC3Q9Y6A5 838 aa17.48■□□□□ 0.39
IDH3A-219ENST00000560414 F5H6K3 240 aa17.47■□□□□ 0.39
IDH3A-219ENST00000560414 TSPY3P0CV98 308 aa17.47■□□□□ 0.39
IDH3A-219ENST00000560414 TSPY8P0CW00 308 aa17.47■□□□□ 0.39
IDH3A-219ENST00000560414 SDSP20132 328 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms