RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 Q7L0L9 218 aa15.77■□□□□ 0.12
TPM1-220ENST00000559556 AMOTL1Q8IY63 956 aa15.77■□□□□ 0.12
TPM1-220ENST00000559556 SPICE1Q8N0Z3 855 aa15.77■□□□□ 0.12
TPM1-220ENST00000559556 CHMP4BQ9H444 224 aaKnown RBP15.77■□□□□ 0.12
TPM1-220ENST00000559556 SLC5A4Q9NY91 659 aa15.77■□□□□ 0.12
TPM1-220ENST00000559556 ROBO3Q96MS0 1386 aa15.76■□□□□ 0.11
TPM1-220ENST00000559556 USP17L12C9JPN9 530 aa15.76■□□□□ 0.11
TPM1-220ENST00000559556 USP17L21D6R901 530 aa15.76■□□□□ 0.11
TPM1-220ENST00000559556 CHGBP05060 677 aa15.76■□□□□ 0.11
TPM1-220ENST00000559556 RTP1P59025 263 aa15.76■□□□□ 0.11
TPM1-220ENST00000559556 PLS1Q14651 629 aa15.76■□□□□ 0.11
TPM1-220ENST00000559556 NCAPG2Q86XI2 1143 aa15.76■□□□□ 0.11
TPM1-220ENST00000559556 ARRDC4Q8NCT1 418 aa15.76■□□□□ 0.11
TPM1-220ENST00000559556 MAML3Q96JK9 1138 aa15.76■□□□□ 0.11
TPM1-220ENST00000559556 MTMR10Q9NXD2 777 aa15.76■□□□□ 0.11
TPM1-220ENST00000559556 ADAMTS5Q9UNA0 930 aa15.76■□□□□ 0.11
TPM1-220ENST00000559556 KBTBD13C9JR72 458 aa15.75■□□□□ 0.11
TPM1-220ENST00000559556 FCER1AP12319 257 aa15.75■□□□□ 0.11
TPM1-220ENST00000559556 ATN1P54259 1190 aaPredicted RBP15.75■□□□□ 0.11
TPM1-220ENST00000559556 TMEM132BQ14DG7 1078 aa15.75■□□□□ 0.11
TPM1-220ENST00000559556 SNX17Q15036 470 aa15.75■□□□□ 0.11
TPM1-220ENST00000559556 GJC2Q5T442 439 aaPredicted RBP15.75■□□□□ 0.11
TPM1-220ENST00000559556 DDRGK1Q96HY6 314 aa15.75■□□□□ 0.11
TPM1-220ENST00000559556 LBHD1Q9BQE6 289 aaPredicted RBP15.75■□□□□ 0.11
TPM1-220ENST00000559556 LRRCC1Q9C099 1032 aa15.75■□□□□ 0.11
TPM1-220ENST00000559556 BCL11AQ9H165 835 aa15.75■□□□□ 0.11
TPM1-220ENST00000559556 STXBP5LQ9Y2K9 1186 aa15.75■□□□□ 0.11
TPM1-220ENST00000559556 REV3LO60673 3130 aa15.74■□□□□ 0.11
TPM1-220ENST00000559556 CHD7Q9P2D1 2997 aa15.74■□□□□ 0.11
TPM1-220ENST00000559556 SLC25A27O95847 323 aa15.74■□□□□ 0.11
TPM1-220ENST00000559556 EEF2P13639 858 aaKnown RBP15.74■□□□□ 0.11
TPM1-220ENST00000559556 ZSCAN25Q6NSZ9 544 aa15.74■□□□□ 0.11
TPM1-220ENST00000559556 CTR9Q6PD62 1173 aa15.74■□□□□ 0.11
TPM1-220ENST00000559556 PUS7LQ9H0K6 701 aaKnown RBP15.74■□□□□ 0.11
TPM1-220ENST00000559556 KANSL2Q9H9L4 492 aa15.74■□□□□ 0.11
TPM1-220ENST00000559556 GOPCQ9HD26 462 aa15.74■□□□□ 0.11
TPM1-220ENST00000559556 FBXO28Q9NVF7 368 aa15.74■□□□□ 0.11
TPM1-220ENST00000559556 ARPP21Q9UBL0 812 aaPredicted RBP15.74■□□□□ 0.11
TPM1-220ENST00000559556 SLC4A4Q9Y6R1 1079 aa15.74■□□□□ 0.11
TPM1-220ENST00000559556 LAMA4Q16363 1823 aa15.73■□□□□ 0.11
TPM1-220ENST00000559556 ANO1Q5XXA6 986 aa15.73■□□□□ 0.11
TPM1-220ENST00000559556 SLC39A5Q6ZMH5 540 aa15.73■□□□□ 0.11
TPM1-220ENST00000559556 RIOX2Q8IUF8 465 aa15.73■□□□□ 0.11
TPM1-220ENST00000559556 NRBP1Q9UHY1 535 aa15.73■□□□□ 0.11
TPM1-220ENST00000559556 ZNF214Q9UL59 606 aaPredicted RBP15.73■□□□□ 0.11
TPM1-220ENST00000559556 PPP1R9AQ9ULJ8 1098 aa15.73■□□□□ 0.11
TPM1-220ENST00000559556 ATP11BQ9Y2G3 1177 aa15.73■□□□□ 0.11
TPM1-220ENST00000559556 VWA5AO00534 786 aa15.72■□□□□ 0.11
TPM1-220ENST00000559556 LRRC41Q15345 812 aa15.72■□□□□ 0.11
TPM1-220ENST00000559556 SBK1Q52WX2 424 aa15.72■□□□□ 0.11
TPM1-220ENST00000559556 FAM47AQ5JRC9 791 aa15.72■□□□□ 0.11
TPM1-220ENST00000559556 PRAMEF19Q5SWL8 479 aa15.72■□□□□ 0.11
TPM1-220ENST00000559556 C1orf53Q5VUE5 145 aa15.72■□□□□ 0.11
TPM1-220ENST00000559556 FAM109BQ6ICB4 259 aaPredicted RBP15.72■□□□□ 0.11
TPM1-220ENST00000559556 REPS2Q8NFH8 660 aa15.72■□□□□ 0.11
TPM1-220ENST00000559556 PRKAG2Q9UGJ0 569 aa15.72■□□□□ 0.11
TPM1-220ENST00000559556 RCAN3Q9UKA8 241 aa15.72■□□□□ 0.11
TPM1-220ENST00000559556 POTEB2H3BUK9 544 aa15.71■□□□□ 0.11
TPM1-220ENST00000559556 DLL1O00548 723 aa15.71■□□□□ 0.11
TPM1-220ENST00000559556 COPB2P35606 906 aa15.71■□□□□ 0.11
TPM1-220ENST00000559556 GIMAP6Q6P9H5 292 aa15.71■□□□□ 0.11
TPM1-220ENST00000559556 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
TPM1-220ENST00000559556 MMP19Q99542 508 aa15.71■□□□□ 0.11
TPM1-220ENST00000559556 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.71■□□□□ 0.11
TPM1-220ENST00000559556 DIS3Q9Y2L1 958 aaKnown RBP15.71■□□□□ 0.11
TPM1-220ENST00000559556 MUC3AQ02505 3323 aa15.71■□□□□ 0.1
TPM1-220ENST00000559556 KIAA1217Q5T5P2 1943 aa15.7■□□□□ 0.1
TPM1-220ENST00000559556 TRIP12Q14669 1992 aaPredicted RBP15.7■□□□□ 0.1
TPM1-220ENST00000559556 SMARCA5O60264 1052 aaPredicted RBP15.7■□□□□ 0.1
TPM1-220ENST00000559556 RASA1P20936 1047 aa15.7■□□□□ 0.1
TPM1-220ENST00000559556 ADCYAP1R1P41586 468 aa15.7■□□□□ 0.1
TPM1-220ENST00000559556 TRIM60Q495X7 471 aa15.7■□□□□ 0.1
TPM1-220ENST00000559556 FAM83BQ5T0W9 1011 aa15.7■□□□□ 0.1
TPM1-220ENST00000559556 STRBPQ96SI9 672 aaKnown RBP15.7■□□□□ 0.1
TPM1-220ENST00000559556 TINF2Q9BSI4 451 aa15.7■□□□□ 0.1
TPM1-220ENST00000559556 PDLIM7Q9NR12 457 aa15.7■□□□□ 0.1
TPM1-220ENST00000559556 ECHDC1Q9NTX5 307 aa15.7■□□□□ 0.1
TPM1-220ENST00000559556 BDP1A6H8Y1 2624 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 GSG1L2A8MUP6 293 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 PGK2P07205 417 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 RARBP10826 455 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 STAT3P40763 770 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 KCTD2Q14681 263 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 ZNF792Q3KQV3 632 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 C20orf194Q5TEA3 1177 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 KBTBD3Q8NAB2 608 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 XPNPEP3Q9NQH7 507 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 NYAP2Q9P242 653 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 PHF24Q9UPV7 400 aa15.69■□□□□ 0.1
TPM1-220ENST00000559556 MYH7BA7E2Y1 1941 aa15.68■□□□□ 0.1
TPM1-220ENST00000559556 PLIN4Q96Q06 1357 aa15.68■□□□□ 0.1
TPM1-220ENST00000559556 APPBP2Q92624 585 aa15.68■□□□□ 0.1
TPM1-220ENST00000559556 OSBP2Q969R2 916 aa15.68■□□□□ 0.1
TPM1-220ENST00000559556 FERMT2Q96AC1 680 aa15.68■□□□□ 0.1
TPM1-220ENST00000559556 GUCD1Q96NT3 240 aa15.68■□□□□ 0.1
TPM1-220ENST00000559556 SLF1Q9BQI6 1058 aa15.68■□□□□ 0.1
TPM1-220ENST00000559556 EPB41L4AQ9HCS5 686 aaPredicted RBP15.68■□□□□ 0.1
TPM1-220ENST00000559556 PRDM5Q9NQX1 630 aaPredicted RBP15.68■□□□□ 0.1
TPM1-220ENST00000559556 SCN5AQ14524 2016 aa15.68■□□□□ 0.1
TPM1-220ENST00000559556 MYCNP04198 464 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms