RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 TSPY3P0CV98 308 aa29.98■■■□□ 2.39
CRNDE-206ENST00000559432 TSPY8P0CW00 308 aa29.98■■■□□ 2.39
CRNDE-206ENST00000559432 CCND3P30281 292 aaPredicted RBP29.98■■■□□ 2.39
CRNDE-206ENST00000559432 HABP4Q5JVS0 413 aaKnown RBP29.98■■■□□ 2.39
CRNDE-206ENST00000559432 CCDC129Q6ZRS4 1044 aa29.98■■■□□ 2.39
CRNDE-206ENST00000559432 SMC5Q8IY18 1101 aa29.98■■■□□ 2.39
CRNDE-206ENST00000559432 EXOC6Q8TAG9 804 aa29.98■■■□□ 2.39
CRNDE-206ENST00000559432 DIS3LQ8TF46 1054 aaKnown RBP29.98■■■□□ 2.39
CRNDE-206ENST00000559432 SLC5A4Q9NY91 659 aa29.98■■■□□ 2.39
CRNDE-206ENST00000559432 FLRT1Q9NZU1 646 aa29.98■■■□□ 2.39
CRNDE-206ENST00000559432 PPP1R9AQ9ULJ8 1098 aa29.98■■■□□ 2.39
CRNDE-206ENST00000559432 RLFQ13129 1914 aa29.98■■■□□ 2.39
CRNDE-206ENST00000559432 GREB1LQ9C091 1923 aaPredicted RBP29.98■■■□□ 2.39
CRNDE-206ENST00000559432 IGKV6D-41A0A0C4DH26 115 aa29.97■■■□□ 2.39
CRNDE-206ENST00000559432 F5H6K3 240 aa29.97■■■□□ 2.39
CRNDE-206ENST00000559432 EVI5O60447 810 aa29.97■■■□□ 2.39
CRNDE-206ENST00000559432 SLC25A27O95847 323 aa29.97■■■□□ 2.39
CRNDE-206ENST00000559432 KLRC3Q07444 240 aa29.97■■■□□ 2.39
CRNDE-206ENST00000559432 TMEM132BQ14DG7 1078 aa29.97■■■□□ 2.39
CRNDE-206ENST00000559432 NPLOC4Q8TAT6 608 aa29.97■■■□□ 2.39
CRNDE-206ENST00000559432 NBPF3Q9H094 633 aa29.97■■■□□ 2.39
CRNDE-206ENST00000559432 HELLSQ9NRZ9 838 aa29.97■■■□□ 2.39
CRNDE-206ENST00000559432 ADAMTS5Q9UNA0 930 aa29.97■■■□□ 2.39
CRNDE-206ENST00000559432 ABRAQ8N0Z2 381 aa29.96■■■□□ 2.39
CRNDE-206ENST00000559432 CEP95Q96GE4 821 aa29.96■■■□□ 2.39
CRNDE-206ENST00000559432 TRIM6-TRIM34B2RNG4 842 aa29.95■■■□□ 2.39
CRNDE-206ENST00000559432 VWA5AO00534 786 aa29.95■■■□□ 2.39
CRNDE-206ENST00000559432 TTLL1O95922 423 aa29.95■■■□□ 2.39
CRNDE-206ENST00000559432 NDUFB10O96000 172 aa29.95■■■□□ 2.39
CRNDE-206ENST00000559432 TICAM2Q86XR7 235 aa29.95■■■□□ 2.39
CRNDE-206ENST00000559432 NUP88Q99567 741 aaPredicted RBP29.95■■■□□ 2.39
CRNDE-206ENST00000559432 MTMR4Q9NYA4 1195 aa29.95■■■□□ 2.39
CRNDE-206ENST00000559432 COLQQ9Y215 455 aaPredicted RBP29.95■■■□□ 2.39
CRNDE-206ENST00000559432 FCER1AP12319 257 aa29.94■■■□□ 2.38
CRNDE-206ENST00000559432 CHD1LQ86WJ1 897 aa29.94■■■□□ 2.38
CRNDE-206ENST00000559432 NEDD1Q8NHV4 660 aa29.94■■■□□ 2.38
CRNDE-206ENST00000559432 MKL1Q969V6 931 aa29.94■■■□□ 2.38
CRNDE-206ENST00000559432 SLF1Q9BQI6 1058 aa29.94■■■□□ 2.38
CRNDE-206ENST00000559432 C11orf49Q9H6J7 331 aa29.94■■■□□ 2.38
CRNDE-206ENST00000559432 SYNPO2Q9UMS6 1093 aa29.94■■■□□ 2.38
CRNDE-206ENST00000559432 PLIN4Q96Q06 1357 aa29.93■■■□□ 2.38
CRNDE-206ENST00000559432 IGHDP01880 384 aa29.93■■■□□ 2.38
CRNDE-206ENST00000559432 CNGA1P29973 690 aa29.93■■■□□ 2.38
CRNDE-206ENST00000559432 CYP2C19P33261 490 aa29.93■■■□□ 2.38
CRNDE-206ENST00000559432 TFAP4Q01664 338 aa29.93■■■□□ 2.38
CRNDE-206ENST00000559432 FAM47AQ5JRC9 791 aa29.93■■■□□ 2.38
CRNDE-206ENST00000559432 OLFML2BQ68BL8 750 aa29.93■■■□□ 2.38
CRNDE-206ENST00000559432 RIOX2Q8IUF8 465 aa29.93■■■□□ 2.38
CRNDE-206ENST00000559432 ZNF236Q9UL36 1845 aa29.93■■■□□ 2.38
CRNDE-206ENST00000559432 COPB2P35606 906 aa29.92■■■□□ 2.38
CRNDE-206ENST00000559432 STAT3P40763 770 aa29.92■■■□□ 2.38
CRNDE-206ENST00000559432 MCMDC2Q4G0Z9 681 aa29.92■■■□□ 2.38
CRNDE-206ENST00000559432 LHX8Q68G74 356 aa29.92■■■□□ 2.38
CRNDE-206ENST00000559432 RILPL2Q969X0 211 aa29.92■■■□□ 2.38
CRNDE-206ENST00000559432 PARP14Q460N5 1801 aa29.92■■■□□ 2.38
CRNDE-206ENST00000559432 FOXP2O15409 715 aa29.91■■■□□ 2.38
CRNDE-206ENST00000559432 COBLO75128 1261 aa29.91■■■□□ 2.38
CRNDE-206ENST00000559432 CTDSPL2Q05D32 466 aa29.91■■■□□ 2.38
CRNDE-206ENST00000559432 PPP4R3BQ5MIZ7 849 aa29.91■■■□□ 2.38
CRNDE-206ENST00000559432 LRRC47Q8N1G4 583 aaKnown RBP29.91■■■□□ 2.38
CRNDE-206ENST00000559432 FAM227BQ96M60 508 aa29.91■■■□□ 2.38
CRNDE-206ENST00000559432 MMP19Q99542 508 aa29.91■■■□□ 2.38
CRNDE-206ENST00000559432 CTDP1Q9Y5B0 961 aaPredicted RBP29.91■■■□□ 2.38
CRNDE-206ENST00000559432 MSCO60682 206 aa29.9■■■□□ 2.38
CRNDE-206ENST00000559432 MNX1P50219 401 aaPredicted RBP29.9■■■□□ 2.38
CRNDE-206ENST00000559432 NUCB1Q02818 461 aa29.9■■■□□ 2.38
CRNDE-206ENST00000559432 VPS53Q5VIR6 699 aa29.9■■■□□ 2.38
CRNDE-206ENST00000559432 CHRDL2Q6WN34 429 aa29.9■■■□□ 2.38
CRNDE-206ENST00000559432 PRPF38AQ8NAV1 312 aaKnown RBP29.9■■■□□ 2.38
CRNDE-206ENST00000559432 DDX20Q9UHI6 824 aaKnown RBP29.9■■■□□ 2.38
CRNDE-206ENST00000559432 ZNF214Q9UL59 606 aaPredicted RBP29.9■■■□□ 2.38
CRNDE-206ENST00000559432 TSPY2A6NKD2 308 aa29.89■■■□□ 2.38
CRNDE-206ENST00000559432 KCTD2Q14681 263 aa29.89■■■□□ 2.38
CRNDE-206ENST00000559432 GMCL1P1Q8NEA9 526 aa29.89■■■□□ 2.38
CRNDE-206ENST00000559432 REPS2Q8NFH8 660 aa29.89■■■□□ 2.38
CRNDE-206ENST00000559432 SUPT16HQ9Y5B9 1047 aaKnown RBP29.89■■■□□ 2.38
CRNDE-206ENST00000559432 A0A0D9SFI3 127 aa29.88■■■□□ 2.37
CRNDE-206ENST00000559432 ZBED4O75132 1171 aa29.88■■■□□ 2.37
CRNDE-206ENST00000559432 KIFC2Q96AC6 838 aa29.88■■■□□ 2.37
CRNDE-206ENST00000559432 TEX13BQ9BXU2 312 aa29.88■■■□□ 2.37
CRNDE-206ENST00000559432 ANAPC4Q9UJX5 808 aa29.88■■■□□ 2.37
CRNDE-206ENST00000559432 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.88■■■□□ 2.37
CRNDE-206ENST00000559432 NMIQ13287 307 aaPredicted RBP29.87■■■□□ 2.37
CRNDE-206ENST00000559432 ALX1Q15699 326 aa29.87■■■□□ 2.37
CRNDE-206ENST00000559432 SLFN13Q68D06 897 aa29.87■■■□□ 2.37
CRNDE-206ENST00000559432 PLEKHM2Q8IWE5 1019 aa29.87■■■□□ 2.37
CRNDE-206ENST00000559432 FEM1BQ9UK73 627 aa29.87■■■□□ 2.37
CRNDE-206ENST00000559432 ISY1Q9ULR0 285 aaKnown RBP29.87■■■□□ 2.37
CRNDE-206ENST00000559432 IGHA2P01877 340 aa29.86■■■□□ 2.37
CRNDE-206ENST00000559432 CYBAP13498 195 aa29.86■■■□□ 2.37
CRNDE-206ENST00000559432 SNRNP48Q6IEG0 339 aaKnown RBP29.86■■■□□ 2.37
CRNDE-206ENST00000559432 MAML3Q96JK9 1138 aa29.86■■■□□ 2.37
CRNDE-206ENST00000559432 STX8Q9UNK0 236 aa29.86■■■□□ 2.37
CRNDE-206ENST00000559432 COL11A1P12107 1806 aaPredicted RBP29.85■■■□□ 2.37
CRNDE-206ENST00000559432 MYH4Q9Y623 1939 aa29.85■■■□□ 2.37
CRNDE-206ENST00000559432 RANBP6O60518 1105 aaKnown RBP29.85■■■□□ 2.37
CRNDE-206ENST00000559432 BMP3P12645 472 aa29.85■■■□□ 2.37
CRNDE-206ENST00000559432 C7orf61Q8IZ16 206 aa29.85■■■□□ 2.37
CRNDE-206ENST00000559432 TRPV1Q8NER1 839 aa29.85■■■□□ 2.37
CRNDE-206ENST00000559432 OSBPL3Q9H4L5 887 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms