RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 STX8Q9UNK0 236 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 MTMR7Q9Y216 660 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 CTDP1Q9Y5B0 961 aaPredicted RBP9.71□□□□□ -0.86
SNX1-207ENST00000559401 PLIN4Q96Q06 1357 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 IGKV6D-41A0A0C4DH26 115 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 F5H6K3 240 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 FGAP02671 866 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 GJB1P08034 283 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 KLRC3Q07444 240 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 IKQ13123 557 aaPredicted RBP9.7□□□□□ -0.86
SNX1-207ENST00000559401 MAP2K5Q13163 448 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 ALX1Q15699 326 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 PPP4R3BQ5MIZ7 849 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 TRIB2Q92519 343 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 APBA2Q99767 749 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 MOV10L1Q9BXT6 1211 aaKnown RBP9.7□□□□□ -0.86
SNX1-207ENST00000559401 SPATC1LQ9H0A9 340 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.7□□□□□ -0.86
SNX1-207ENST00000559401 ANAPC4Q9UJX5 808 aa9.7□□□□□ -0.86
SNX1-207ENST00000559401 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.7□□□□□ -0.86
SNX1-207ENST00000559401 SLC15A5A6NIM6 579 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 NMT2O60551 498 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 ZMYM6O95789 1325 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 TFRCP02786 760 aaKnown RBP9.69□□□□□ -0.86
SNX1-207ENST00000559401 XRCC5P13010 732 aaKnown RBP9.69□□□□□ -0.86
SNX1-207ENST00000559401 PRKAR2AP13861 404 aaKnown RBP9.69□□□□□ -0.86
SNX1-207ENST00000559401 GSPT1P15170 499 aaKnown RBP9.69□□□□□ -0.86
SNX1-207ENST00000559401 ERCC3P19447 782 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 PTPREP23469 700 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 TRIM32Q13049 653 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 CCL14Q16627 93 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 SLFN13Q68D06 897 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 MFSD6Q6ZSS7 791 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 DPP9Q86TI2 863 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 TRMT44Q8IYL2 757 aaKnown RBP9.69□□□□□ -0.86
SNX1-207ENST00000559401 U2AF1L4Q8WU68 220 aaKnown RBP9.69□□□□□ -0.86
SNX1-207ENST00000559401 KIFC2Q96AC6 838 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 DEFB118Q96PH6 123 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 SLF1Q9BQI6 1058 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 HMX1Q9NP08 348 aaPredicted RBP9.69□□□□□ -0.86
SNX1-207ENST00000559401 ZNF236Q9UL36 1845 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 PPP1R9AQ9ULJ8 1098 aa9.69□□□□□ -0.86
SNX1-207ENST00000559401 RPTORQ8N122 1335 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 VWA5AO00534 786 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 ZNF213O14771 459 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 ORC4O43929 436 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 BMP3P12645 472 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 ADORA2AP29274 412 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 SLC1A4P43007 532 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 GJA8P48165 433 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 GRB14Q14449 540 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 TMEM132BQ14DG7 1078 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 CCDC96Q2M329 555 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 MORN1Q5T089 497 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 CPXCR1Q8N123 301 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 PRPF38AQ8NAV1 312 aaKnown RBP9.68□□□□□ -0.86
SNX1-207ENST00000559401 GMCL1P1Q8NEA9 526 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 SHCBP1Q8NEM2 672 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 RUFY2Q8WXA3 655 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 MKL1Q969V6 931 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 SHISA4Q96DD7 197 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 RNF41Q9H4P4 317 aaPredicted RBP9.68□□□□□ -0.86
SNX1-207ENST00000559401 MROH8Q9H579 483 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 PDE4DIPQ5VU43 2346 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 PLXNA1Q9UIW2 1896 aa9.68□□□□□ -0.86
SNX1-207ENST00000559401 HTTP42858 3142 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 ZNFX1Q9P2E3 1918 aaKnown RBP9.67□□□□□ -0.86
SNX1-207ENST00000559401 TMEM232C9JQI7 657 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 STRNO43815 780 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 ZBED4O75132 1171 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 FARP2O94887 1054 aaPredicted RBP9.67□□□□□ -0.86
SNX1-207ENST00000559401 SGPL1O95470 568 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 SLC25A27O95847 323 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 FCER1AP12319 257 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 MCCP23508 829 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 STAT3P40763 770 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 KCTD2Q14681 263 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 IMMTQ16891 758 aaKnown RBP9.67□□□□□ -0.86
SNX1-207ENST00000559401 AKNAD1Q5T1N1 836 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 MFSD14CQ5VZR4 134 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 SNRNP48Q6IEG0 339 aaKnown RBP9.67□□□□□ -0.86
SNX1-207ENST00000559401 TBC1D10CQ8IV04 446 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 USP6NLQ92738 828 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 MMP19Q99542 508 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 SLC5A4Q9NY91 659 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 FEM1BQ9UK73 627 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 SYNPO2Q9UMS6 1093 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 TACC3Q9Y6A5 838 aa9.67□□□□□ -0.86
SNX1-207ENST00000559401 FRMPD3Q5JV73 1810 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 NEDD4P46934 1319 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 RAD50Q92878 1312 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 NEFLP07196 543 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 CNGA1P29973 690 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 COPB2P35606 906 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 STAT2P52630 851 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 CACNB2Q08289 660 aaPredicted RBP9.66□□□□□ -0.86
SNX1-207ENST00000559401 KCTD1Q719H9 257 aa9.66□□□□□ -0.86
SNX1-207ENST00000559401 CENPQQ7L2Z9 268 aaPredicted RBP9.66□□□□□ -0.86
SNX1-207ENST00000559401 RIOX2Q8IUF8 465 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms