RNA–Protein interactions for RNA: ENST00000559212.1

PCAT29-203, prostate cancer associated transcript 29, humanhuman

TSL 3 BASIC

Gene PCAT29, Length 647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-203ENST00000559212 ECHDC1Q9NTX5 307 aa12.7□□□□□ -0.38
PCAT29-203ENST00000559212 SZT2Q5T011 3432 aa12.69□□□□□ -0.38
PCAT29-203ENST00000559212 KBTBD13C9JR72 458 aa12.69□□□□□ -0.38
PCAT29-203ENST00000559212 GJC2Q5T442 439 aaPredicted RBP12.69□□□□□ -0.38
PCAT29-203ENST00000559212 ANO1Q5XXA6 986 aa12.69□□□□□ -0.38
PCAT29-203ENST00000559212 MAML3Q96JK9 1138 aa12.69□□□□□ -0.38
PCAT29-203ENST00000559212 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
PCAT29-203ENST00000559212 MMP19Q99542 508 aa12.69□□□□□ -0.38
PCAT29-203ENST00000559212 PRKAG2Q9UGJ0 569 aa12.69□□□□□ -0.38
PCAT29-203ENST00000559212 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
PCAT29-203ENST00000559212 RTP1P59025 263 aa12.68□□□□□ -0.38
PCAT29-203ENST00000559212 SBK1Q52WX2 424 aa12.68□□□□□ -0.38
PCAT29-203ENST00000559212 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
PCAT29-203ENST00000559212 FAM83BQ5T0W9 1011 aa12.68□□□□□ -0.38
PCAT29-203ENST00000559212 GIMAP6Q6P9H5 292 aa12.68□□□□□ -0.38
PCAT29-203ENST00000559212 RIOX2Q8IUF8 465 aa12.68□□□□□ -0.38
PCAT29-203ENST00000559212 KBTBD3Q8NAB2 608 aa12.68□□□□□ -0.38
PCAT29-203ENST00000559212 LBHD1Q9BQE6 289 aaPredicted RBP12.68□□□□□ -0.38
PCAT29-203ENST00000559212 MKNK2Q9HBH9 465 aa12.68□□□□□ -0.38
PCAT29-203ENST00000559212 FBXO28Q9NVF7 368 aa12.68□□□□□ -0.38
PCAT29-203ENST00000559212 PPP1R9AQ9ULJ8 1098 aa12.68□□□□□ -0.38
PCAT29-203ENST00000559212 ADAMTS5Q9UNA0 930 aa12.68□□□□□ -0.38
PCAT29-203ENST00000559212 RANBP2P49792 3224 aaKnown RBP12.68□□□□□ -0.38
PCAT29-203ENST00000559212 GREB1LQ9C091 1923 aaPredicted RBP12.68□□□□□ -0.38
PCAT29-203ENST00000559212 ZNFX1Q9P2E3 1918 aaKnown RBP12.68□□□□□ -0.38
PCAT29-203ENST00000559212 GSG1L2A8MUP6 293 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 MINDY4BA8MYZ0 360 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 VWA5AO00534 786 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 COPB2P35606 906 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 STAT3P40763 770 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 KCTD2Q14681 263 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 STK11IPQ8N1F8 1099 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 DEFB123Q8N688 67 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 SLC17A8Q8NDX2 589 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 APPBP2Q92624 585 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCAT29-203ENST00000559212 DCTPP1Q9H773 170 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 ATP11BQ9Y2G3 1177 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 ROBO3Q96MS0 1386 aa12.67□□□□□ -0.38
PCAT29-203ENST00000559212 PLXNA1Q9UIW2 1896 aa12.66□□□□□ -0.38
PCAT29-203ENST00000559212 RNF113AO15541 343 aaKnown RBP12.66□□□□□ -0.38
PCAT29-203ENST00000559212 PGK2P07205 417 aa12.66□□□□□ -0.38
PCAT29-203ENST00000559212 ZFYP08048 801 aaPredicted RBP12.66□□□□□ -0.38
PCAT29-203ENST00000559212 GNAT2P19087 354 aa12.66□□□□□ -0.38
PCAT29-203ENST00000559212 RASA1P20936 1047 aa12.66□□□□□ -0.38
PCAT29-203ENST00000559212 TDO2P48775 406 aa12.66□□□□□ -0.38
PCAT29-203ENST00000559212 TSHZ3Q63HK5 1081 aa12.66□□□□□ -0.38
PCAT29-203ENST00000559212 SLC39A5Q6ZMH5 540 aa12.66□□□□□ -0.38
PCAT29-203ENST00000559212 Q7L0L9 218 aa12.66□□□□□ -0.38
PCAT29-203ENST00000559212 OSBP2Q969R2 916 aa12.66□□□□□ -0.38
PCAT29-203ENST00000559212 NYAP2Q9P242 653 aa12.66□□□□□ -0.38
PCAT29-203ENST00000559212 NRBP1Q9UHY1 535 aa12.66□□□□□ -0.38
PCAT29-203ENST00000559212 GPAA1O43292 621 aa12.65□□□□□ -0.38
PCAT29-203ENST00000559212 APPP05067 770 aa12.65□□□□□ -0.38
PCAT29-203ENST00000559212 RARBP10826 455 aa12.65□□□□□ -0.38
PCAT29-203ENST00000559212 LRRC41Q15345 812 aa12.65□□□□□ -0.38
PCAT29-203ENST00000559212 LRRFIP1Q32MZ4 808 aaKnown RBP12.65□□□□□ -0.38
PCAT29-203ENST00000559212 ZNF792Q3KQV3 632 aa12.65□□□□□ -0.38
PCAT29-203ENST00000559212 FAM47AQ5JRC9 791 aa12.65□□□□□ -0.38
PCAT29-203ENST00000559212 REPS2Q8NFH8 660 aa12.65□□□□□ -0.38
PCAT29-203ENST00000559212 SLF1Q9BQI6 1058 aa12.65□□□□□ -0.38
PCAT29-203ENST00000559212 TINF2Q9BSI4 451 aa12.65□□□□□ -0.38
PCAT29-203ENST00000559212 ZNF287Q9HBT7 754 aa12.65□□□□□ -0.38
PCAT29-203ENST00000559212 XPNPEP3Q9NQH7 507 aa12.65□□□□□ -0.38
PCAT29-203ENST00000559212 ZNF214Q9UL59 606 aaPredicted RBP12.65□□□□□ -0.38
PCAT29-203ENST00000559212 DIS3Q9Y2L1 958 aaKnown RBP12.65□□□□□ -0.38
PCAT29-203ENST00000559212 LTBP2Q14767 1821 aa12.65□□□□□ -0.39
PCAT29-203ENST00000559212 MYH4Q9Y623 1939 aa12.64□□□□□ -0.39
PCAT29-203ENST00000559212 F5H6K3 240 aa12.64□□□□□ -0.39
PCAT29-203ENST00000559212 M0R2C6 588 aa12.64□□□□□ -0.39
PCAT29-203ENST00000559212 ADCYAP1R1P41586 468 aa12.64□□□□□ -0.39
PCAT29-203ENST00000559212 KLRC3Q07444 240 aa12.64□□□□□ -0.39
PCAT29-203ENST00000559212 TRIM60Q495X7 471 aa12.64□□□□□ -0.39
PCAT29-203ENST00000559212 ZNF444Q8N0Y2 327 aaPredicted RBP12.64□□□□□ -0.39
PCAT29-203ENST00000559212 FERMT2Q96AC1 680 aa12.64□□□□□ -0.39
PCAT29-203ENST00000559212 NUP88Q99567 741 aaPredicted RBP12.64□□□□□ -0.39
PCAT29-203ENST00000559212 TEX13BQ9BXU2 312 aa12.64□□□□□ -0.39
PCAT29-203ENST00000559212 EPB41L4AQ9HCS5 686 aaPredicted RBP12.64□□□□□ -0.39
PCAT29-203ENST00000559212 PRDM5Q9NQX1 630 aaPredicted RBP12.64□□□□□ -0.39
PCAT29-203ENST00000559212 CLIP2Q9UDT6 1046 aa12.64□□□□□ -0.39
PCAT29-203ENST00000559212 CTDP1Q9Y5B0 961 aaPredicted RBP12.64□□□□□ -0.39
PCAT29-203ENST00000559212 TTC41PQ6P2S7 1318 aa12.63□□□□□ -0.39
PCAT29-203ENST00000559212 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
PCAT29-203ENST00000559212 ZBED4O75132 1171 aa12.63□□□□□ -0.39
PCAT29-203ENST00000559212 PRDM1O75626 825 aa12.63□□□□□ -0.39
PCAT29-203ENST00000559212 NDUFB10O96000 172 aa12.63□□□□□ -0.39
PCAT29-203ENST00000559212 SNX17Q15036 470 aa12.63□□□□□ -0.39
PCAT29-203ENST00000559212 SNRNP48Q6IEG0 339 aaKnown RBP12.63□□□□□ -0.39
PCAT29-203ENST00000559212 RNF180Q86T96 592 aa12.63□□□□□ -0.39
PCAT29-203ENST00000559212 PRPF38AQ8NAV1 312 aaKnown RBP12.63□□□□□ -0.39
PCAT29-203ENST00000559212 MTMR10Q9NXD2 777 aa12.63□□□□□ -0.39
PCAT29-203ENST00000559212 CNPY2Q9Y2B0 182 aa12.63□□□□□ -0.39
PCAT29-203ENST00000559212 STXBP5LQ9Y2K9 1186 aa12.63□□□□□ -0.39
PCAT29-203ENST00000559212 IGKV6D-41A0A0C4DH26 115 aa12.62□□□□□ -0.39
PCAT29-203ENST00000559212 ERC2O15083 957 aa12.62□□□□□ -0.39
PCAT29-203ENST00000559212 AKR1A1P14550 325 aa12.62□□□□□ -0.39
PCAT29-203ENST00000559212 TAL1P17542 331 aaPredicted RBP12.62□□□□□ -0.39
PCAT29-203ENST00000559212 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
PCAT29-203ENST00000559212 C1orf53Q5VUE5 145 aa12.62□□□□□ -0.39
PCAT29-203ENST00000559212 IFNL3Q8IZI9 196 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms