RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 CCDC178Q5BJE1 867 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 EPSTI1Q96J88 318 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 ANO10Q9NW15 660 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 HDAC9Q9UKV0 1011 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 CTAGE5O15320 804 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 SMC2O95347 1197 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 CASP1P29466 404 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 SEPT2Q15019 361 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 WWC2Q6AWC2 1192 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 FILIP1Q7Z7B0 1213 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 BLIDQ8IZY5 108 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 MTA3Q9BTC8 594 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 PIM2Q9P1W9 311 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 COL24A1Q17RW2 1714 aa12.35□□□□□ -0.43
CSPG4P5-201ENST00000558731 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 SMCO2A6NFE2 343 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 YDJCA8MPS7 323 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 WNT7AO00755 349 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 SLC1A4P43007 532 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 TNNI2P48788 182 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 CCDC84Q86UT8 332 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 FMR1NBQ8N0W7 255 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 MAD2L2Q9UI95 211 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 CYTH3O43739 400 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 CMA1P23946 247 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 DPCR1Q3MIW9 517 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 LONRF3Q496Y0 759 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 SHISA4Q96DD7 197 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 SERTAD1Q9UHV2 236 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 USH1GQ495M9 461 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 AXDND1Q5T1B0 1012 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 MTMR4Q9NYA4 1195 aa12.34□□□□□ -0.43
CSPG4P5-201ENST00000558731 CUTAO60888 179 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 TTLL1O95922 423 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 GH2P01242 217 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 CALML3P27482 149 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 GRM4Q14833 912 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 DALRD3Q5D0E6 543 aaKnown RBP12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 TYW1BQ6NUM6 668 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 HHIPL2Q6UWX4 724 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 PHF20Q9BVI0 1012 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 NAT10Q9H0A0 1025 aaKnown RBP12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 OFD1O75665 1012 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 FGRP09769 529 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 LMOD1P29536 600 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 ICA1Q05084 483 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 CCDC148Q8NFR7 591 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 ZNF831Q5JPB2 1677 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 A0A1W2PQ27 194 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 A0A1W2PQ64 194 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 A0A1W2PQD8 194 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 TULP1O00294 542 aaPredicted RBP12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 FUT2Q10981 343 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 PTPAQ15257 358 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 RTKN2Q8IZC4 609 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 KIAA1468Q9P260 1216 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 PI4KBQ9UBF8 816 aa12.33□□□□□ -0.44
CSPG4P5-201ENST00000558731 CCNT1O60563 726 aaKnown RBP12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 PTPN21Q16825 1174 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 CC2D2BQ6DHV5 1058 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 MAP7D2Q96T17 732 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 CCDC39Q9UFE4 941 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 SHTN1A0MZ66 631 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 EEF2P13639 858 aaKnown RBP12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 ABCB5Q2M3G0 1257 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 C17orf53Q8N3J3 647 aaPredicted RBP12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 ENGASEQ8NFI3 743 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 MAP3K14Q99558 947 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 TMEM260Q9NX78 707 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 HOOK1Q9UJC3 728 aaKnown RBP12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 DUOX1Q9NRD9 1551 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 SHMT1P34896 483 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 RCAN1P53805 252 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 UBE2SQ16763 222 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 SYMPKQ92797 1274 aaKnown RBP12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 ZDHHC15Q96MV8 337 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 C6orf50Q9HD87 102 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 SUGT1Q9Y2Z0 365 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 DOCK2Q92608 1830 aa12.32□□□□□ -0.44
CSPG4P5-201ENST00000558731 MYO1BO43795 1136 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 COBLO75128 1261 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 PDHBP11177 359 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 PRKG1Q13976 671 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 FEZ1Q99689 392 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 BLZF1Q9H2G9 400 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 TAOK3Q9H2K8 898 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 FAM198AQ9UFP1 575 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 USP17L10C9JJH3 530 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 PPP6R2O75170 966 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 CDAN1Q8IWY9 1227 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 CCDC34Q96HJ3 373 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 FUCA2Q9BTY2 467 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 TMEM39BQ9GZU3 492 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 CDK11BP21127 795 aaKnown RBP12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 STX17P56962 302 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms