RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 LRFN3Q9BTN0 628 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 SPATC1LQ9H0A9 340 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 RPAP3Q9H6T3 665 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-207ENST00000558500 SAP30BPQ9UHR5 308 aaKnown RBP8.3□□□□□ -1.08
LRRC28-207ENST00000558500 NRBP1Q9UHY1 535 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 HCN4Q9Y3Q4 1203 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 MYH13Q9UKX3 1938 aa8.3□□□□□ -1.08
LRRC28-207ENST00000558500 FRMPD3Q5JV73 1810 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 RLFQ13129 1914 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 PGK1P00558 417 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 MCAMP43121 646 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 PPIGQ13427 754 aaKnown RBP eCLIP8.29□□□□□ -1.08
LRRC28-207ENST00000558500 RAB3GAP1Q15042 981 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 GORABQ5T7V8 394 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 NAA16Q6N069 864 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-207ENST00000558500 MFSD5Q6N075 450 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 CCDC174Q6PII3 467 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 ADGRA1Q86SQ6 560 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 ABRAQ8N0Z2 381 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 MAML3Q96JK9 1138 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 HOXC10Q9NYD6 342 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 MSRAQ9UJ68 235 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 TBX21Q9UL17 535 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-207ENST00000558500 CHD9Q3L8U1 2897 aa8.29□□□□□ -1.08
LRRC28-207ENST00000558500 ROBO3Q96MS0 1386 aa8.28□□□□□ -1.08
LRRC28-207ENST00000558500 ADAMTS4O75173 837 aa8.28□□□□□ -1.08
LRRC28-207ENST00000558500 IRX5P78411 483 aaPredicted RBP8.28□□□□□ -1.08
LRRC28-207ENST00000558500 COG2Q14746 738 aa8.28□□□□□ -1.08
LRRC28-207ENST00000558500 RAB30Q15771 203 aa8.28□□□□□ -1.08
LRRC28-207ENST00000558500 ABCB5Q2M3G0 1257 aa8.28□□□□□ -1.08
LRRC28-207ENST00000558500 PSRC1Q6PGN9 363 aaPredicted RBP8.28□□□□□ -1.08
LRRC28-207ENST00000558500 EHD4Q9H223 541 aa8.28□□□□□ -1.08
LRRC28-207ENST00000558500 MROH8Q9H579 483 aa8.28□□□□□ -1.08
LRRC28-207ENST00000558500 EPHX3Q9H6B9 360 aa8.28□□□□□ -1.08
LRRC28-207ENST00000558500 STARD7Q9NQZ5 370 aa8.28□□□□□ -1.08
LRRC28-207ENST00000558500 HDAC5Q9UQL6 1122 aa8.28□□□□□ -1.08
LRRC28-207ENST00000558500 SIPA1L1O43166 1804 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 ATAD5Q96QE3 1844 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 UQCRFS1P1P0C7P4 283 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 CSF2RAP15509 400 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 TAL1P17542 331 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-207ENST00000558500 ACLYP53396 1101 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 DYNLL1P63167 89 aaKnown RBP8.27□□□□□ -1.09
LRRC28-207ENST00000558500 TFF2Q03403 129 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 AAK1Q2M2I8 961 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 CERKLQ49MI3 558 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-207ENST00000558500 TMEM31Q5JXX7 168 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 ZNF365Q70YC5 407 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 NCAPG2Q86XI2 1143 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 TMEM199Q8N511 208 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 MB21D1Q8N884 522 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 TSEN34Q9BSV6 310 aaKnown RBP8.27□□□□□ -1.09
LRRC28-207ENST00000558500 NKX2-4Q9H2Z4 354 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 OCEL1Q9H607 264 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 SLC28A3Q9HAS3 691 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 MRS2Q9HD23 443 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 CABP5Q9NP86 173 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 SNRKQ9NRH2 765 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 SERPINB13Q9UIV8 391 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 MUC6Q6W4X9 2439 aa8.27□□□□□ -1.09
LRRC28-207ENST00000558500 MOXD2PA6NHM9 499 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 ERC2O15083 957 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 SRGAP3O43295 1099 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 IGSF3O75054 1194 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 ZNF865P0CJ78 1059 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-207ENST00000558500 ACRP10323 421 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 FCER1AP12319 257 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 AKR1A1P14550 325 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 GUCY1A2P33402 732 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 KCNQ1P51787 676 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 MTX1Q13505 466 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 PLS1Q14651 629 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 CCSAPQ6IQ19 270 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-207ENST00000558500 EFCAB3Q8N7B9 438 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 NUP133Q8WUM0 1156 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 HERVK_113Q902F9 699 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 LENG1Q96BZ8 264 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-207ENST00000558500 TINF2Q9BSI4 451 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 TANGO6Q9C0B7 1094 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 YBX2Q9Y2T7 364 aaKnown RBP8.26□□□□□ -1.09
LRRC28-207ENST00000558500 ZNF236Q9UL36 1845 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 ZNF521Q96K83 1311 aa8.26□□□□□ -1.09
LRRC28-207ENST00000558500 A0A1W2PRG0 241 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 GPR37L1O60883 481 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 CYP2E1P05181 493 aaPredicted RBP8.25□□□□□ -1.09
LRRC28-207ENST00000558500 PGK2P07205 417 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 SHMT1P34896 483 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 CDK7P50613 346 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 SEPT2Q15019 361 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 KCNA10Q16322 511 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 ZNF792Q3KQV3 632 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 ALDH1L2Q3SY69 923 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 TTC6Q86TZ1 520 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 ALYREFQ86V81 257 aaKnown RBP8.25□□□□□ -1.09
LRRC28-207ENST00000558500 MICALL1Q8N3F8 863 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 KLHDC9Q8NEP7 349 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 ATG4CQ96DT6 458 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 MEIS3Q99687 375 aa8.25□□□□□ -1.09
LRRC28-207ENST00000558500 IL23AQ9NPF7 189 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms