RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 ATP5JP18859 108 aa12.87□□□□□ -0.35
SHF-203ENST00000558294 ADCYAP1R1P41586 468 aa12.87□□□□□ -0.35
SHF-203ENST00000558294 SHHQ15465 462 aa12.87□□□□□ -0.35
SHF-203ENST00000558294 TRIM60Q495X7 471 aa12.87□□□□□ -0.35
SHF-203ENST00000558294 FAM47AQ5JRC9 791 aa12.87□□□□□ -0.35
SHF-203ENST00000558294 C1orf53Q5VUE5 145 aa12.87□□□□□ -0.35
SHF-203ENST00000558294 C16orf86Q6ZW13 317 aa12.87□□□□□ -0.35
SHF-203ENST00000558294 FAM161BQ96MY7 647 aa12.87□□□□□ -0.35
SHF-203ENST00000558294 PRDM5Q9NQX1 630 aaPredicted RBP12.87□□□□□ -0.35
SHF-203ENST00000558294 PDLIM7Q9NR12 457 aa12.87□□□□□ -0.35
SHF-203ENST00000558294 FBXO28Q9NVF7 368 aa12.87□□□□□ -0.35
SHF-203ENST00000558294 NRBP1Q9UHY1 535 aa12.87□□□□□ -0.35
SHF-203ENST00000558294 ZNFX1Q9P2E3 1918 aaKnown RBP12.87□□□□□ -0.35
SHF-203ENST00000558294 MYH7P12883 1935 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 USP17L12C9JPN9 530 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 USP17L21D6R901 530 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 HMMRO75330 724 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
SHF-203ENST00000558294 MS4A1P11836 297 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 C9orf50Q5SZB4 431 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 ZNF697Q5TEC3 545 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
SHF-203ENST00000558294 RIOX2Q8IUF8 465 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 BADQ92934 168 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 FERMT2Q96AC1 680 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 MMP19Q99542 508 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 HAUS7Q99871 368 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.86□□□□□ -0.35
SHF-203ENST00000558294 BCL11AQ9H165 835 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 ZBTB40Q9NUA8 1239 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 PLXNA1Q9UIW2 1896 aa12.86□□□□□ -0.35
SHF-203ENST00000558294 ROBO3Q96MS0 1386 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 PGK2P07205 417 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 UBE3CQ15386 1083 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 ZNF792Q3KQV3 632 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.85□□□□□ -0.35
SHF-203ENST00000558294 AMOTL1Q8IY63 956 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 REPS2Q8NFH8 660 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 TRIM43Q96BQ3 446 aaPredicted RBP12.85□□□□□ -0.35
SHF-203ENST00000558294 TINF2Q9BSI4 451 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 COL25A1Q9BXS0 654 aaPredicted RBP12.85□□□□□ -0.35
SHF-203ENST00000558294 KANSL2Q9H9L4 492 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 XPNPEP3Q9NQH7 507 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 ZNF214Q9UL59 606 aaPredicted RBP12.85□□□□□ -0.35
SHF-203ENST00000558294 PPP1R9AQ9ULJ8 1098 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 DDX19BQ9UMR2 479 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 PHF24Q9UPV7 400 aa12.85□□□□□ -0.35
SHF-203ENST00000558294 GREB1LQ9C091 1923 aaPredicted RBP12.85□□□□□ -0.35
SHF-203ENST00000558294 EYSQ5T1H1 3165 aa12.84□□□□□ -0.35
SHF-203ENST00000558294 VWA5AO00534 786 aa12.84□□□□□ -0.35
SHF-203ENST00000558294 RARBP10826 455 aa12.84□□□□□ -0.35
SHF-203ENST00000558294 TLE2Q04725 743 aa12.84□□□□□ -0.35
SHF-203ENST00000558294 CTR9Q6PD62 1173 aa12.84□□□□□ -0.35
SHF-203ENST00000558294 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
SHF-203ENST00000558294 PUS7LQ9H0K6 701 aaKnown RBP12.84□□□□□ -0.35
SHF-203ENST00000558294 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
SHF-203ENST00000558294 RCAN3Q9UKA8 241 aa12.84□□□□□ -0.35
SHF-203ENST00000558294 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
SHF-203ENST00000558294 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
SHF-203ENST00000558294 SLC4A4Q9Y6R1 1079 aa12.84□□□□□ -0.35
SHF-203ENST00000558294 SMCHD1A6NHR9 2005 aa12.83□□□□□ -0.36
SHF-203ENST00000558294 PGK1P00558 417 aa12.83□□□□□ -0.36
SHF-203ENST00000558294 ZNF865P0CJ78 1059 aaPredicted RBP12.83□□□□□ -0.36
SHF-203ENST00000558294 TAL1P17542 331 aaPredicted RBP12.83□□□□□ -0.36
SHF-203ENST00000558294 ITGB8P26012 769 aa12.83□□□□□ -0.36
SHF-203ENST00000558294 STAT3P40763 770 aa12.83□□□□□ -0.36
SHF-203ENST00000558294 SMAD3P84022 425 aaKnown RBP12.83□□□□□ -0.36
SHF-203ENST00000558294 KCTD2Q14681 263 aa12.83□□□□□ -0.36
SHF-203ENST00000558294 FAM83BQ5T0W9 1011 aa12.83□□□□□ -0.36
SHF-203ENST00000558294 DDRGK1Q96HY6 314 aa12.83□□□□□ -0.36
SHF-203ENST00000558294 CDX2Q99626 313 aaPredicted RBP12.83□□□□□ -0.36
SHF-203ENST00000558294 SEMA6BQ9H3T3 888 aa12.83□□□□□ -0.36
SHF-203ENST00000558294 A0A1W2PQ45 241 aaPredicted RBP12.82□□□□□ -0.36
SHF-203ENST00000558294 A0A1W2PQY0 241 aa12.82□□□□□ -0.36
SHF-203ENST00000558294 CLTBP09497 229 aa12.82□□□□□ -0.36
SHF-203ENST00000558294 AKR1A1P14550 325 aa12.82□□□□□ -0.36
SHF-203ENST00000558294 COPB2P35606 906 aa12.82□□□□□ -0.36
SHF-203ENST00000558294 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
SHF-203ENST00000558294 RNF180Q86T96 592 aa12.82□□□□□ -0.36
SHF-203ENST00000558294 LENG1Q96BZ8 264 aaPredicted RBP12.82□□□□□ -0.36
SHF-203ENST00000558294 TTYH1Q9H313 450 aaPredicted RBP12.82□□□□□ -0.36
SHF-203ENST00000558294 ARPP21Q9UBL0 812 aaPredicted RBP12.82□□□□□ -0.36
SHF-203ENST00000558294 TACC3Q9Y6A5 838 aa12.82□□□□□ -0.36
SHF-203ENST00000558294 KIAA0355O15063 1070 aa12.81□□□□□ -0.36
SHF-203ENST00000558294 RAD21O60216 631 aa12.81□□□□□ -0.36
SHF-203ENST00000558294 ADAMTS4O75173 837 aa12.81□□□□□ -0.36
SHF-203ENST00000558294 EPHB4P54760 987 aa12.81□□□□□ -0.36
SHF-203ENST00000558294 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
SHF-203ENST00000558294 NUP88Q99567 741 aaPredicted RBP12.81□□□□□ -0.36
SHF-203ENST00000558294 SLF1Q9BQI6 1058 aa12.81□□□□□ -0.36
SHF-203ENST00000558294 F5H6K3 240 aa12.8□□□□□ -0.36
SHF-203ENST00000558294 PQBP1O60828 265 aaKnown RBP12.8□□□□□ -0.36
SHF-203ENST00000558294 RASA1P20936 1047 aa12.8□□□□□ -0.36
SHF-203ENST00000558294 KLRC3Q07444 240 aa12.8□□□□□ -0.36
SHF-203ENST00000558294 SNRNP48Q6IEG0 339 aaKnown RBP12.8□□□□□ -0.36
SHF-203ENST00000558294 MSL3Q8N5Y2 521 aaKnown RBP12.8□□□□□ -0.36
SHF-203ENST00000558294 KLHDC9Q8NEP7 349 aa12.8□□□□□ -0.36
SHF-203ENST00000558294 STRBPQ96SI9 672 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms