RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 KCTD2Q14681 263 aa16.26■□□□□ 0.19
SNRPA1-204ENST00000558020 OSBP2Q969R2 916 aa16.26■□□□□ 0.19
SNRPA1-204ENST00000558020 NYAP2Q9P242 653 aa16.26■□□□□ 0.19
SNRPA1-204ENST00000558020 PATL2C9JE40 543 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 SMIM22K7EJ46 135 aa16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 VWA5AO00534 786 aa16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 SEPT4O43236 478 aa16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 GPAA1O43292 621 aa16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 SYN1P17600 705 aa16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 STAT3P40763 770 aa16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 TMEM132BQ14DG7 1078 aa16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 RIOX2Q8IUF8 465 aa16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 MMP19Q99542 508 aa16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 PPP1R9AQ9ULJ8 1098 aa16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 CTDP1Q9Y5B0 961 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-204ENST00000558020 KBTBD13C9JR72 458 aa16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 COBLO75128 1261 aa16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 IGHA2P01877 340 aa16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 CYBAP13498 195 aa16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 RASA1P20936 1047 aa16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 MAGEA10P43363 369 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 LRRC26Q2I0M4 334 aa16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 FAM83BQ5T0W9 1011 aa16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 STK11IPQ8N1F8 1099 aa16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 PRPF38AQ8NAV1 312 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 LBHD1Q9BQE6 289 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 UBE2OQ9C0C9 1292 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 PRKAG2Q9UGJ0 569 aa16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 NRBP1Q9UHY1 535 aa16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 DIS3Q9Y2L1 958 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-204ENST00000558020 F5H6K3 240 aa16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 PDE4BQ07343 736 aa16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 KLRC3Q07444 240 aa16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 TSHZ3Q63HK5 1081 aa16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 TRPV1Q8NER1 839 aa16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 MAML3Q96JK9 1138 aa16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 SLF1Q9BQI6 1058 aa16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 FSD1Q9BTV5 496 aa16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 FBXO28Q9NVF7 368 aa16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 CLIP2Q9UDT6 1046 aa16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 SYNPO2Q9UMS6 1093 aa16.23■□□□□ 0.19
SNRPA1-204ENST00000558020 RLFQ13129 1914 aa16.22■□□□□ 0.19
SNRPA1-204ENST00000558020 ALPK3Q96L96 1907 aa16.22■□□□□ 0.19
SNRPA1-204ENST00000558020 ZBED4O75132 1171 aa16.22■□□□□ 0.19
SNRPA1-204ENST00000558020 PPP4R3BQ5MIZ7 849 aa16.22■□□□□ 0.19
SNRPA1-204ENST00000558020 GPR153Q6NV75 609 aa16.22■□□□□ 0.19
SNRPA1-204ENST00000558020 IFNL3Q8IZI9 196 aa16.22■□□□□ 0.19
SNRPA1-204ENST00000558020 TDHQ8IZJ6 230 aa16.22■□□□□ 0.19
SNRPA1-204ENST00000558020 TEX13BQ9BXU2 312 aa16.22■□□□□ 0.19
SNRPA1-204ENST00000558020 PCDHB15Q9Y5E8 787 aa16.22■□□□□ 0.19
SNRPA1-204ENST00000558020 ROBO3Q96MS0 1386 aa16.22■□□□□ 0.19
SNRPA1-204ENST00000558020 ZNF236Q9UL36 1845 aa16.22■□□□□ 0.19
SNRPA1-204ENST00000558020 TTLL1O95922 423 aa16.21■□□□□ 0.19
SNRPA1-204ENST00000558020 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-204ENST00000558020 GJC2Q5T442 439 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-204ENST00000558020 MKL1Q969V6 931 aa16.21■□□□□ 0.19
SNRPA1-204ENST00000558020 DDX11Q96FC9 970 aa16.21■□□□□ 0.19
SNRPA1-204ENST00000558020 NAPBQ9H115 298 aa16.21■□□□□ 0.19
SNRPA1-204ENST00000558020 ZNF214Q9UL59 606 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-204ENST00000558020 SZT2Q5T011 3432 aa16.21■□□□□ 0.19
SNRPA1-204ENST00000558020 DNAH12Q6ZR08 3092 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 A0A0G2JMZ2 1700 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 M0R2C6 588 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 NDUFB10O96000 172 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 TSPY3P0CV98 308 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 TSPY8P0CW00 308 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 RARBP10826 455 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 MX1P20591 662 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 ATN1P54259 1190 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 LRIT3Q3SXY7 679 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 PRAMEF19Q5SWL8 479 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 TINF2Q9BSI4 451 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 MTMR4Q9NYA4 1195 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 FEM1BQ9UK73 627 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 CNPY2Q9Y2B0 182 aa16.2■□□□□ 0.18
SNRPA1-204ENST00000558020 PRDM1O75626 825 aa16.19■□□□□ 0.18
SNRPA1-204ENST00000558020 PGK2P07205 417 aa16.19■□□□□ 0.18
SNRPA1-204ENST00000558020 FDX1P10109 184 aa16.19■□□□□ 0.18
SNRPA1-204ENST00000558020 SNRNP48Q6IEG0 339 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-204ENST00000558020 MSL3Q8N5Y2 521 aaKnown RBP16.19■□□□□ 0.18
SNRPA1-204ENST00000558020 PI4K2BQ8TCG2 481 aa16.19■□□□□ 0.18
SNRPA1-204ENST00000558020 CEP95Q96GE4 821 aa16.19■□□□□ 0.18
SNRPA1-204ENST00000558020 NUP88Q99567 741 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-204ENST00000558020 ZNFX1Q9P2E3 1918 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 IGKV6D-41A0A0C4DH26 115 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 ATP2A1O14983 1001 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 MDM2Q00987 491 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 ZNF792Q3KQV3 632 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 ZMYM1Q5SVZ6 1142 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 ANKRD45Q5TZF3 282 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 ANO1Q5XXA6 986 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 SLC39A5Q6ZMH5 540 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 RNF180Q86T96 592 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 GMCL1P1Q8NEA9 526 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 REPS2Q8NFH8 660 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 NEDD1Q8NHV4 660 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 KIFC2Q96AC6 838 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 LRCH3Q96II8 777 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 EPB41L4AQ9HCS5 686 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms