RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 SLC4A4Q9Y6R1 1079 aa17.35■□□□□ 0.37
VRTN-202ENST00000557177 RTP1P59025 263 aa17.34■□□□□ 0.37
VRTN-202ENST00000557177 GJC2Q5T442 439 aaPredicted RBP17.34■□□□□ 0.37
VRTN-202ENST00000557177 ZSCAN25Q6NSZ9 544 aa17.34■□□□□ 0.37
VRTN-202ENST00000557177 ARRDC4Q8NCT1 418 aa17.34■□□□□ 0.37
VRTN-202ENST00000557177 DDRGK1Q96HY6 314 aa17.34■□□□□ 0.37
VRTN-202ENST00000557177 KANSL2Q9H9L4 492 aa17.34■□□□□ 0.37
VRTN-202ENST00000557177 MTMR10Q9NXD2 777 aa17.34■□□□□ 0.37
VRTN-202ENST00000557177 PLXNA1Q9UIW2 1896 aa17.34■□□□□ 0.37
VRTN-202ENST00000557177 RCAN3Q9UKA8 241 aa17.34■□□□□ 0.37
VRTN-202ENST00000557177 SLC25A27O95847 323 aa17.33■□□□□ 0.36
VRTN-202ENST00000557177 FCER1AP12319 257 aa17.33■□□□□ 0.36
VRTN-202ENST00000557177 SNX17Q15036 470 aa17.33■□□□□ 0.36
VRTN-202ENST00000557177 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.33■□□□□ 0.36
VRTN-202ENST00000557177 FBXO28Q9NVF7 368 aa17.33■□□□□ 0.36
VRTN-202ENST00000557177 ARPP21Q9UBL0 812 aaPredicted RBP17.33■□□□□ 0.36
VRTN-202ENST00000557177 KBTBD13C9JR72 458 aa17.32■□□□□ 0.36
VRTN-202ENST00000557177 SMARCA5O60264 1052 aaPredicted RBP17.32■□□□□ 0.36
VRTN-202ENST00000557177 PRAMEF19Q5SWL8 479 aa17.32■□□□□ 0.36
VRTN-202ENST00000557177 C20orf194Q5TEA3 1177 aa17.32■□□□□ 0.36
VRTN-202ENST00000557177 ANO1Q5XXA6 986 aa17.32■□□□□ 0.36
VRTN-202ENST00000557177 SLC39A5Q6ZMH5 540 aa17.32■□□□□ 0.36
VRTN-202ENST00000557177 RIOX2Q8IUF8 465 aa17.32■□□□□ 0.36
VRTN-202ENST00000557177 REPS2Q8NFH8 660 aa17.32■□□□□ 0.36
VRTN-202ENST00000557177 LBHD1Q9BQE6 289 aaPredicted RBP17.32■□□□□ 0.36
VRTN-202ENST00000557177 GOPCQ9HD26 462 aa17.32■□□□□ 0.36
VRTN-202ENST00000557177 PPP1R9AQ9ULJ8 1098 aa17.32■□□□□ 0.36
VRTN-202ENST00000557177 STXBP5LQ9Y2K9 1186 aa17.32■□□□□ 0.36
VRTN-202ENST00000557177 ROBO3Q96MS0 1386 aa17.31■□□□□ 0.36
VRTN-202ENST00000557177 VWA5AO00534 786 aa17.31■□□□□ 0.36
VRTN-202ENST00000557177 SBK1Q52WX2 424 aa17.31■□□□□ 0.36
VRTN-202ENST00000557177 SAMD1Q6SPF0 538 aaPredicted RBP17.31■□□□□ 0.36
VRTN-202ENST00000557177 STRBPQ96SI9 672 aaKnown RBP17.31■□□□□ 0.36
VRTN-202ENST00000557177 ECHDC1Q9NTX5 307 aa17.31■□□□□ 0.36
VRTN-202ENST00000557177 NRBP1Q9UHY1 535 aa17.31■□□□□ 0.36
VRTN-202ENST00000557177 ZNF214Q9UL59 606 aaPredicted RBP17.31■□□□□ 0.36
VRTN-202ENST00000557177 EYSQ5T1H1 3165 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 SMCHD1A6NHR9 2005 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 GSG1L2A8MUP6 293 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 LRRC41Q15345 812 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 FAM47AQ5JRC9 791 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 FAM83BQ5T0W9 1011 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 C1orf53Q5VUE5 145 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 GIMAP6Q6P9H5 292 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 MMP19Q99542 508 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 PRKAG2Q9UGJ0 569 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 ATP11BQ9Y2G3 1177 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 DIS3Q9Y2L1 958 aaKnown RBP17.3■□□□□ 0.36
VRTN-202ENST00000557177 CDH23Q9H251 3354 aa17.3■□□□□ 0.36
VRTN-202ENST00000557177 POTEB2H3BUK9 544 aa17.29■□□□□ 0.36
VRTN-202ENST00000557177 PGK2P07205 417 aa17.29■□□□□ 0.36
VRTN-202ENST00000557177 RASA1P20936 1047 aa17.29■□□□□ 0.36
VRTN-202ENST00000557177 STAT3P40763 770 aa17.29■□□□□ 0.36
VRTN-202ENST00000557177 ZNF792Q3KQV3 632 aa17.29■□□□□ 0.36
VRTN-202ENST00000557177 KBTBD3Q8NAB2 608 aa17.29■□□□□ 0.36
VRTN-202ENST00000557177 TINF2Q9BSI4 451 aa17.29■□□□□ 0.36
VRTN-202ENST00000557177 MYH4Q9Y623 1939 aa17.28■□□□□ 0.36
VRTN-202ENST00000557177 DLL1O00548 723 aa17.28■□□□□ 0.36
VRTN-202ENST00000557177 COPB2P35606 906 aa17.28■□□□□ 0.36
VRTN-202ENST00000557177 ADCYAP1R1P41586 468 aa17.28■□□□□ 0.36
VRTN-202ENST00000557177 KCTD2Q14681 263 aa17.28■□□□□ 0.36
VRTN-202ENST00000557177 TRIM60Q495X7 471 aa17.28■□□□□ 0.36
VRTN-202ENST00000557177 FAM109BQ6ICB4 259 aaPredicted RBP17.28■□□□□ 0.36
VRTN-202ENST00000557177 OSBP2Q969R2 916 aa17.28■□□□□ 0.36
VRTN-202ENST00000557177 NYAP2Q9P242 653 aa17.28■□□□□ 0.36
VRTN-202ENST00000557177 APPBP2Q92624 585 aa17.27■□□□□ 0.36
VRTN-202ENST00000557177 SLF1Q9BQI6 1058 aa17.27■□□□□ 0.36
VRTN-202ENST00000557177 EPB41L4AQ9HCS5 686 aaPredicted RBP17.27■□□□□ 0.36
VRTN-202ENST00000557177 XPNPEP3Q9NQH7 507 aa17.27■□□□□ 0.36
VRTN-202ENST00000557177 PDLIM7Q9NR12 457 aa17.27■□□□□ 0.36
VRTN-202ENST00000557177 PHF24Q9UPV7 400 aa17.27■□□□□ 0.36
VRTN-202ENST00000557177 IGKV6D-41A0A0C4DH26 115 aa17.26■□□□□ 0.35
VRTN-202ENST00000557177 RAD21O60216 631 aa17.26■□□□□ 0.35
VRTN-202ENST00000557177 NDUFB10O96000 172 aa17.26■□□□□ 0.35
VRTN-202ENST00000557177 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
VRTN-202ENST00000557177 ZNF865P0CJ78 1059 aaPredicted RBP17.26■□□□□ 0.35
VRTN-202ENST00000557177 RARBP10826 455 aa17.26■□□□□ 0.35
VRTN-202ENST00000557177 TAL1P17542 331 aaPredicted RBP17.26■□□□□ 0.35
VRTN-202ENST00000557177 TSHZ3Q63HK5 1081 aa17.26■□□□□ 0.35
VRTN-202ENST00000557177 FERMT2Q96AC1 680 aa17.26■□□□□ 0.35
VRTN-202ENST00000557177 NUP88Q99567 741 aaPredicted RBP17.26■□□□□ 0.35
VRTN-202ENST00000557177 TEX13BQ9BXU2 312 aa17.26■□□□□ 0.35
VRTN-202ENST00000557177 DCTPP1Q9H773 170 aa17.26■□□□□ 0.35
VRTN-202ENST00000557177 MKNK2Q9HBH9 465 aa17.26■□□□□ 0.35
VRTN-202ENST00000557177 CUL9Q8IWT3 2517 aa17.25■□□□□ 0.35
VRTN-202ENST00000557177 TRIM43BA6NCK2 446 aa17.25■□□□□ 0.35
VRTN-202ENST00000557177 MINDY4BA8MYZ0 360 aa17.25■□□□□ 0.35
VRTN-202ENST00000557177 F5H6K3 240 aa17.25■□□□□ 0.35
VRTN-202ENST00000557177 RNF113AO15541 343 aaKnown RBP17.25■□□□□ 0.35
VRTN-202ENST00000557177 GPAA1O43292 621 aa17.25■□□□□ 0.35
VRTN-202ENST00000557177 KLRC3Q07444 240 aa17.25■□□□□ 0.35
VRTN-202ENST00000557177 SH3RF1Q7Z6J0 888 aa17.25■□□□□ 0.35
VRTN-202ENST00000557177 TRIM43Q96BQ3 446 aaPredicted RBP17.25■□□□□ 0.35
VRTN-202ENST00000557177 GPATCH3Q96I76 525 aa17.25■□□□□ 0.35
VRTN-202ENST00000557177 GUCD1Q96NT3 240 aa17.25■□□□□ 0.35
VRTN-202ENST00000557177 PRDM5Q9NQX1 630 aaPredicted RBP17.25■□□□□ 0.35
VRTN-202ENST00000557177 ATP2A1O14983 1001 aa17.24■□□□□ 0.35
VRTN-202ENST00000557177 PGK1P00558 417 aa17.24■□□□□ 0.35
VRTN-202ENST00000557177 ZFYP08048 801 aaPredicted RBP17.24■□□□□ 0.35
VRTN-202ENST00000557177 AKR1A1P14550 325 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms