RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 NEK1Q96PY6 1258 aa13.83□□□□□ -0.2
MTHFD1-211ENST00000555709 ZSWIM6Q9HCJ5 1215 aa13.83□□□□□ -0.2
MTHFD1-211ENST00000555709 INCENPQ9NQS7 918 aa13.83□□□□□ -0.2
MTHFD1-211ENST00000555709 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.2
MTHFD1-211ENST00000555709 SLC45A1Q9Y2W3 748 aa13.83□□□□□ -0.2
MTHFD1-211ENST00000555709 A0A0G2JLL6 359 aaPredicted RBP13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 PRDM1O75626 825 aa13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 CASTP20810 708 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 PSMA5P28066 241 aa13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 SHMT1P34896 483 aa13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 NT5C2P49902 561 aa13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 PDE4BQ07343 736 aa13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 MAP3K21Q5TCX8 1036 aa13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 PRRT2Q7Z6L0 340 aaPredicted RBP13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 ZSCAN29Q8IWY8 852 aaPredicted RBP13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 NCOA7Q8NI08 942 aa13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 UPF3BQ9BZI7 483 aaKnown RBP13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 CNNM2Q9H8M5 875 aa13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 SWAP70Q9UH65 585 aa13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 GJD2Q9UKL4 321 aa13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 PLIN4Q96Q06 1357 aa13.82□□□□□ -0.2
MTHFD1-211ENST00000555709 LTBP2Q14767 1821 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 B4E1Z4 1266 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 HMGB1P09429 215 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 SLURP2P0DP57 97 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 CPA1P15085 419 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 RASA1P20936 1047 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 RPS6KB1P23443 525 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 CDK8P49336 464 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 ANTXR2P58335 489 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 MAP3K10Q02779 954 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 BLOC1S2Q6QNY1 142 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 RALYLQ86SE5 291 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 FOXP4Q8IVH2 680 aaPredicted RBP13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 STK11IPQ8N1F8 1099 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 TTC14Q96N46 770 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 KRT23Q9C075 422 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 HERC5Q9UII4 1024 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 PTPRFP10586 1907 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 WDR19Q8NEZ3 1342 aa13.81□□□□□ -0.2
MTHFD1-211ENST00000555709 PLXNB2O15031 1838 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 ATAD5Q96QE3 1844 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 FAM196BA6NMK8 535 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 TBC1D12O60347 775 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 KDM4AO75164 1064 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 EXOSC10Q01780 885 aaKnown RBP13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 TRDNQ13061 729 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 SHHQ15465 462 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 TATDN1Q6P1N9 297 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 RUFY3Q7L099 469 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 CYB5R4Q7L1T6 521 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 DHX32Q7L7V1 743 aaKnown RBP13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 FASTKD5Q7L8L6 764 aaKnown RBP13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 TRIB2Q92519 343 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 ESR2Q92731 530 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 LBHD1Q9BQE6 289 aaPredicted RBP13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 ZNF287Q9HBT7 754 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 CYP46A1Q9Y6A2 500 aa13.8□□□□□ -0.2
MTHFD1-211ENST00000555709 DOCK1Q14185 1865 aa13.79□□□□□ -0.2
MTHFD1-211ENST00000555709 MCM5P33992 734 aa13.79□□□□□ -0.2
MTHFD1-211ENST00000555709 SMAD3P84022 425 aaKnown RBP13.79□□□□□ -0.2
MTHFD1-211ENST00000555709 RRP12Q5JTH9 1297 aaKnown RBP13.79□□□□□ -0.2
MTHFD1-211ENST00000555709 C9orf50Q5SZB4 431 aa13.79□□□□□ -0.2
MTHFD1-211ENST00000555709 CRACR2BQ8N4Y2 399 aaPredicted RBP13.79□□□□□ -0.2
MTHFD1-211ENST00000555709 ANKRD13CQ8N6S4 541 aa13.79□□□□□ -0.2
MTHFD1-211ENST00000555709 ARIH1Q9Y4X5 557 aaPredicted RBP13.79□□□□□ -0.2
MTHFD1-211ENST00000555709 PRC1O43663 620 aa13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 NEK4P51957 841 aa13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 FAM110CQ1W6H9 321 aa13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 LHX8Q68G74 356 aa13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 IL27Q8NEV9 243 aa13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 SMCR8Q8TEV9 937 aaPredicted RBP13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 TCEANC2Q96MN5 208 aa13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 AGXT2Q9BYV1 514 aa13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 MKNK2Q9HBH9 465 aa13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 TOMM22Q9NS69 142 aa13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 ZSWIM5Q9P217 1185 aa13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 RBM19Q9Y4C8 960 aaKnown RBP13.78□□□□□ -0.2
MTHFD1-211ENST00000555709 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 CD2BP2O95400 341 aaKnown RBP13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 AKR1B1P15121 316 aa13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 RRP1BQ14684 758 aaKnown RBP13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 FAM47AQ5JRC9 791 aa13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 CHST3Q7LGC8 479 aa13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 FBXL16Q8N461 479 aa13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 NEDD1Q8NHV4 660 aa13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 MTA3Q9BTC8 594 aa13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 TRIM34Q9BYJ4 488 aa13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 ALDH8A1Q9H2A2 487 aaPredicted RBP13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 PDRG1Q9NUG6 133 aa13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 AFG3L2Q9Y4W6 797 aa13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 ZHX2Q9Y6X8 837 aa13.77□□□□□ -0.21
MTHFD1-211ENST00000555709 PHIPQ8WWQ0 1821 aa13.76□□□□□ -0.21
MTHFD1-211ENST00000555709 IGKV6D-41A0A0C4DH26 115 aa13.76□□□□□ -0.21
MTHFD1-211ENST00000555709 TSPY2A6NKD2 308 aa13.76□□□□□ -0.21
MTHFD1-211ENST00000555709 PHF20L1A8MW92 1017 aa13.76□□□□□ -0.21
MTHFD1-211ENST00000555709 SH2B2O14492 632 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms