RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 SNW1Q13573 536 aaKnown RBP13.8□□□□□ -0.2
ARHGEF40-206ENST00000555232 FKBP15Q5T1M5 1219 aa13.8□□□□□ -0.2
ARHGEF40-206ENST00000555232 TTBK2Q6IQ55 1244 aa13.8□□□□□ -0.2
ARHGEF40-206ENST00000555232 BARGINQ6ZT62 677 aa13.8□□□□□ -0.2
ARHGEF40-206ENST00000555232 COL23A1Q86Y22 540 aaPredicted RBP13.8□□□□□ -0.2
ARHGEF40-206ENST00000555232 SRBD1Q8N5C6 995 aaKnown RBP13.8□□□□□ -0.2
ARHGEF40-206ENST00000555232 TBC1D22AQ8WUA7 517 aa13.8□□□□□ -0.2
ARHGEF40-206ENST00000555232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.8□□□□□ -0.2
ARHGEF40-206ENST00000555232 TMEM260Q9NX78 707 aa13.8□□□□□ -0.2
ARHGEF40-206ENST00000555232 PPARDQ03181 441 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 ICA1Q05084 483 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 KIF4BQ2VIQ3 1234 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 KRT79Q5XKE5 535 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 NCAPH2Q6IBW4 605 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 SNX29Q8TEQ0 813 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 RAB34Q9BZG1 259 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 PCDHAC2Q9Y5I4 1007 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 PXDNLA1KZ92 1463 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 POLD1P28340 1107 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 TNNT3P45378 269 aaPredicted RBP13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 UBXN1Q04323 297 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 PTPROQ16827 1216 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 LRWD1Q9UFC0 647 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 NALCNQ8IZF0 1738 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 MYCLP12524 364 aaPredicted RBP13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 LIFRP42702 1097 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 NONOQ15233 471 aaKnown RBP eCLIP13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 CLEC11AQ9Y240 323 aa13.79□□□□□ -0.2
ARHGEF40-206ENST00000555232 USP17L15C9J2P7 530 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 USP17L13C9JLJ4 530 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 USP17L11C9JVI0 530 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 USP17L18D6R9N7 530 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 USP17L22D6RA61 530 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 USP17L17D6RBQ6 530 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 USP17L19D6RCP7 530 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 USP17L20D6RJB6 530 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 AKR1B1P15121 316 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 USP17L24Q0WX57 530 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 PRR16Q569H4 304 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 CEP135Q66GS9 1140 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 USP17L6PQ6QN14 398 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 STAG1Q8WVM7 1258 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 CMA1P23946 247 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 NFIAQ12857 509 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 LRRC41Q15345 812 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 KRBA2Q6ZNG9 492 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 SAMSN1Q9NSI8 373 aaKnown RBP13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 PCDHA1Q9Y5I3 950 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 TNS2Q63HR2 1409 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 FGFR2P21802 821 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 IRX5P78411 483 aaPredicted RBP13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 RDH13Q8NBN7 331 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 SLC39A2Q9NP94 309 aa13.78□□□□□ -0.2
ARHGEF40-206ENST00000555232 MEIS1O00470 390 aa13.77□□□□□ -0.2
ARHGEF40-206ENST00000555232 GH2P01242 217 aa13.77□□□□□ -0.2
ARHGEF40-206ENST00000555232 SEPT2Q15019 361 aa13.77□□□□□ -0.2
ARHGEF40-206ENST00000555232 SLFN13Q68D06 897 aa13.77□□□□□ -0.2
ARHGEF40-206ENST00000555232 NBPF11Q86T75 865 aa13.77□□□□□ -0.2
ARHGEF40-206ENST00000555232 KIF18AQ8NI77 898 aa13.77□□□□□ -0.2
ARHGEF40-206ENST00000555232 CACTINQ8WUQ7 758 aaKnown RBP13.77□□□□□ -0.2
ARHGEF40-206ENST00000555232 MED1Q15648 1581 aaPredicted RBP13.77□□□□□ -0.2
ARHGEF40-206ENST00000555232 DCCP43146 1447 aa13.77□□□□□ -0.2
ARHGEF40-206ENST00000555232 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
ARHGEF40-206ENST00000555232 NIM1KQ8IY84 436 aa13.77□□□□□ -0.21
ARHGEF40-206ENST00000555232 TBCKQ8TEA7 893 aa13.77□□□□□ -0.21
ARHGEF40-206ENST00000555232 PSMB7Q99436 277 aa13.77□□□□□ -0.21
ARHGEF40-206ENST00000555232 FAM193AP78312 1265 aa13.77□□□□□ -0.21
ARHGEF40-206ENST00000555232 PDE4DIPQ5VU43 2346 aa13.77□□□□□ -0.21
ARHGEF40-206ENST00000555232 NEMFO60524 1076 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 ADCY7P51828 1080 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 NLRP12P59046 1061 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 RBM6P78332 1123 aaKnown RBP13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 TSGA10IPQ3SY00 556 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 CRACR2AQ9BSW2 395 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 PLEKHA4Q9H4M7 779 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 CALCRLQ16602 461 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 VGLL2Q8N8G2 317 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 HPS3Q969F9 1004 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 SH2D3AQ9BRG2 576 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 PSTPIP2Q9H939 334 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 LTN1O94822 1766 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 PSMA7O14818 248 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 MRPL12P52815 198 aaKnown RBP13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 KANK3Q6NY19 840 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 SHC4Q6S5L8 630 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 ARHGAP27Q6ZUM4 889 aa13.76□□□□□ -0.21
ARHGEF40-206ENST00000555232 CRKP46108 304 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 ZNF772Q68DY9 489 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 CABP7Q86V35 215 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 CEP89Q96ST8 783 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 POLR3EQ9NVU0 708 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 RGPD2P0DJD1 1756 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 CCDC66A2RUB6 948 aa13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 NAA30Q147X3 362 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 VIRMAQ69YN4 1812 aaKnown RBP13.75□□□□□ -0.21
ARHGEF40-206ENST00000555232 FBXO33Q7Z6M2 555 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms