RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 IL1R1P14778 569 aa16.9■□□□□ 0.3
XRCC3-211ENST00000555055 CDK8P49336 464 aa16.9■□□□□ 0.3
XRCC3-211ENST00000555055 POSTNQ15063 836 aa16.9■□□□□ 0.3
XRCC3-211ENST00000555055 TMC6Q7Z403 805 aa16.9■□□□□ 0.3
XRCC3-211ENST00000555055 SMYD4Q8IYR2 804 aaPredicted RBP16.9■□□□□ 0.3
XRCC3-211ENST00000555055 TNFRSF25Q93038 417 aa16.9■□□□□ 0.3
XRCC3-211ENST00000555055 SRPRBQ9Y5M8 271 aaKnown RBP16.9■□□□□ 0.3
XRCC3-211ENST00000555055 PCP11498 1178 aaKnown RBP16.9■□□□□ 0.3
XRCC3-211ENST00000555055 GSTO1P78417 241 aa16.9■□□□□ 0.3
XRCC3-211ENST00000555055 MDM2Q00987 491 aaPredicted RBP16.9■□□□□ 0.3
XRCC3-211ENST00000555055 TTC38Q5R3I4 469 aa16.9■□□□□ 0.3
XRCC3-211ENST00000555055 HEATR3Q7Z4Q2 680 aa16.9■□□□□ 0.3
XRCC3-211ENST00000555055 EYA3Q99504 573 aa16.9■□□□□ 0.3
XRCC3-211ENST00000555055 FANCLQ9NW38 375 aa16.9■□□□□ 0.3
XRCC3-211ENST00000555055 TRMT1Q9NXH9 659 aaKnown RBP16.9■□□□□ 0.3
XRCC3-211ENST00000555055 BBOX1O75936 387 aa16.89■□□□□ 0.3
XRCC3-211ENST00000555055 MMP10P09238 476 aa16.89■□□□□ 0.3
XRCC3-211ENST00000555055 CACNB3P54284 484 aa16.89■□□□□ 0.3
XRCC3-211ENST00000555055 CCZ1BP86790 482 aa16.89■□□□□ 0.3
XRCC3-211ENST00000555055 CCZ1P86791 482 aaPredicted RBP16.89■□□□□ 0.3
XRCC3-211ENST00000555055 FMR1Q06787 632 aaKnown RBP eCLIP16.89■□□□□ 0.3
XRCC3-211ENST00000555055 PFKFB3Q16875 520 aaPredicted RBP16.89■□□□□ 0.3
XRCC3-211ENST00000555055 KMT5BQ4FZB7 885 aa16.89■□□□□ 0.3
XRCC3-211ENST00000555055 TIGD1Q96MW7 591 aa16.89■□□□□ 0.3
XRCC3-211ENST00000555055 IMPACTQ9P2X3 320 aa16.89■□□□□ 0.3
XRCC3-211ENST00000555055 MAN1B1Q9UKM7 699 aa16.89■□□□□ 0.3
XRCC3-211ENST00000555055 ZNF622Q969S3 477 aaKnown RBP eCLIP16.89■□□□□ 0.29
XRCC3-211ENST00000555055 UBA5Q9GZZ9 404 aa16.89■□□□□ 0.29
XRCC3-211ENST00000555055 DBNDD1Q9H9R9 158 aa16.89■□□□□ 0.29
XRCC3-211ENST00000555055 ZNF215Q9UL58 517 aaPredicted RBP16.89■□□□□ 0.29
XRCC3-211ENST00000555055 DAGLAQ9Y4D2 1042 aa16.89■□□□□ 0.29
XRCC3-211ENST00000555055 GPR75-ASB3A0A0A6YYF3 556 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 ACTN4O43707 911 aaKnown RBP16.88■□□□□ 0.29
XRCC3-211ENST00000555055 SLU7O95391 586 aaKnown RBP16.88■□□□□ 0.29
XRCC3-211ENST00000555055 SKILP12757 684 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 PPP4CP60510 307 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 PPP2R5BQ15173 497 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 IL17AQ16552 155 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 AMOTL1Q8IY63 956 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 CCAR2Q8N163 923 aaKnown RBP16.88■□□□□ 0.29
XRCC3-211ENST00000555055 BBXQ8WY36 941 aaPredicted RBP16.88■□□□□ 0.29
XRCC3-211ENST00000555055 CEP95Q96GE4 821 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 OSBPL5Q9H0X9 879 aaPredicted RBP16.88■□□□□ 0.29
XRCC3-211ENST00000555055 DDX4Q9NQI0 724 aaKnown RBP16.88■□□□□ 0.29
XRCC3-211ENST00000555055 FAM237AA0A1B0GTK4 181 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 TMEM232C9JQI7 657 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 WWC2Q6AWC2 1192 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 KLHL10Q6JEL2 608 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 PLIN2Q99541 437 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 BLZF1Q9H2G9 400 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 L2HGDHQ9H9P8 463 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 BRMS1Q9HCU9 246 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 MAST2Q6P0Q8 1798 aa16.88■□□□□ 0.29
XRCC3-211ENST00000555055 FRMPD2Q68DX3 1309 aaPredicted RBP16.88■□□□□ 0.29
XRCC3-211ENST00000555055 FAM196BA6NMK8 535 aa16.87■□□□□ 0.29
XRCC3-211ENST00000555055 LDHCP07864 332 aa16.87■□□□□ 0.29
XRCC3-211ENST00000555055 FANCCQ00597 558 aa16.87■□□□□ 0.29
XRCC3-211ENST00000555055 PP2D1A8MPX8 630 aa16.87■□□□□ 0.29
XRCC3-211ENST00000555055 SRGNP10124 158 aa16.87■□□□□ 0.29
XRCC3-211ENST00000555055 HOXA10P31260 410 aaPredicted RBP16.87■□□□□ 0.29
XRCC3-211ENST00000555055 STX17P56962 302 aa16.87■□□□□ 0.29
XRCC3-211ENST00000555055 LRRC47Q8N1G4 583 aaKnown RBP16.87■□□□□ 0.29
XRCC3-211ENST00000555055 TTF2Q9UNY4 1162 aaKnown RBP16.87■□□□□ 0.29
XRCC3-211ENST00000555055 SERPINC1P01008 464 aa16.86■□□□□ 0.29
XRCC3-211ENST00000555055 KIF5BP33176 963 aa16.86■□□□□ 0.29
XRCC3-211ENST00000555055 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
XRCC3-211ENST00000555055 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
XRCC3-211ENST00000555055 MED15Q96RN5 788 aa16.86■□□□□ 0.29
XRCC3-211ENST00000555055 ZC3H12CQ9C0D7 883 aaKnown RBP16.86■□□□□ 0.29
XRCC3-211ENST00000555055 CEP131Q9UPN4 1083 aa16.86■□□□□ 0.29
XRCC3-211ENST00000555055 SNED1Q8TER0 1413 aa16.86■□□□□ 0.29
XRCC3-211ENST00000555055 NAA30Q147X3 362 aaPredicted RBP16.86■□□□□ 0.29
XRCC3-211ENST00000555055 INF2Q27J81 1249 aa16.86■□□□□ 0.29
XRCC3-211ENST00000555055 DLEC1Q9Y238 1755 aa16.86■□□□□ 0.29
XRCC3-211ENST00000555055 KLRF2D3W0D1 207 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 CFAP100Q494V2 611 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 FBXO38Q6PIJ6 1188 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 RGS22Q8NE09 1264 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 ZNF592Q92610 1267 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 SMARCE1Q969G3 411 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 NAV1Q8NEY1 1877 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 H2AFXP16104 143 aaPredicted RBP16.85■□□□□ 0.29
XRCC3-211ENST00000555055 MYL5Q02045 173 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 GRM4Q14833 912 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 ARMCX5Q6P1M9 558 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 DPP8Q6V1X1 898 aaPredicted RBP16.85■□□□□ 0.29
XRCC3-211ENST00000555055 C15orf52Q6ZUT6 534 aaKnown RBP16.85■□□□□ 0.29
XRCC3-211ENST00000555055 BLIDQ8IZY5 108 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 CRAMP1Q96RY5 1269 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 ATP6V0A2Q9Y487 856 aa16.85■□□□□ 0.29
XRCC3-211ENST00000555055 PSDA5PKW4 1024 aaPredicted RBP16.84■□□□□ 0.29
XRCC3-211ENST00000555055 USP17L5A8MUK1 530 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 RAD21O60216 631 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 NFIAQ12857 509 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 ZFPM1Q8IX07 1006 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 BPIFA3Q9BQP9 254 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 SAMSN1Q9NSI8 373 aaKnown RBP16.84■□□□□ 0.29
XRCC3-211ENST00000555055 CDK5RAP2Q96SN8 1893 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 G3V3G9 751 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 UBASH3AP57075 661 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms