RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 TSPY2A6NKD2 308 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 F5H6K3 240 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 PRMT2P55345 433 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 PDE4BQ07343 736 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 KLRC3Q07444 240 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 COG2Q14746 738 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 LBX2Q6XYB7 198 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 PLEKHH3Q7Z736 793 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 SLAIN1Q8ND83 568 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 ZKSCAN3Q9BRR0 538 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 GOPCQ9HD26 462 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 IL17RBQ9NRM6 502 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 MTMR4Q9NYA4 1195 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 FLRT1Q9NZU1 646 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 RABGAP1Q9Y3P9 1069 aa13.76□□□□□ -0.21
TMEM253-203ENST00000554329 WDR46O15213 610 aaKnown RBP13.75□□□□□ -0.21
TMEM253-203ENST00000554329 TMEM132BQ14DG7 1078 aa13.75□□□□□ -0.21
TMEM253-203ENST00000554329 NCAPG2Q86XI2 1143 aa13.75□□□□□ -0.21
TMEM253-203ENST00000554329 NEDD1Q8NHV4 660 aa13.75□□□□□ -0.21
TMEM253-203ENST00000554329 NPLOC4Q8TAT6 608 aa13.75□□□□□ -0.21
TMEM253-203ENST00000554329 KIFC2Q96AC6 838 aa13.75□□□□□ -0.21
TMEM253-203ENST00000554329 SPATC1LQ9H0A9 340 aa13.75□□□□□ -0.21
TMEM253-203ENST00000554329 SH2D4AQ9H788 454 aa13.75□□□□□ -0.21
TMEM253-203ENST00000554329 NYAP2Q9P242 653 aa13.75□□□□□ -0.21
TMEM253-203ENST00000554329 STX8Q9UNK0 236 aa13.75□□□□□ -0.21
TMEM253-203ENST00000554329 SLC3A2P08195 630 aaKnown RBP13.74□□□□□ -0.21
TMEM253-203ENST00000554329 ERCC3P19447 782 aa13.74□□□□□ -0.21
TMEM253-203ENST00000554329 MAPK4P31152 587 aa13.74□□□□□ -0.21
TMEM253-203ENST00000554329 MORN1Q5T089 497 aa13.74□□□□□ -0.21
TMEM253-203ENST00000554329 SLFN13Q68D06 897 aa13.74□□□□□ -0.21
TMEM253-203ENST00000554329 KCTD1Q719H9 257 aa13.74□□□□□ -0.21
TMEM253-203ENST00000554329 LPAR1Q92633 364 aa13.74□□□□□ -0.21
TMEM253-203ENST00000554329 DEFB118Q96PH6 123 aa13.74□□□□□ -0.21
TMEM253-203ENST00000554329 NUDT12Q9BQG2 462 aa13.74□□□□□ -0.21
TMEM253-203ENST00000554329 TAF6LQ9Y6J9 622 aa13.74□□□□□ -0.21
TMEM253-203ENST00000554329 PLIN4Q96Q06 1357 aa13.73□□□□□ -0.21
TMEM253-203ENST00000554329 FRMPD2Q68DX3 1309 aaPredicted RBP13.73□□□□□ -0.21
TMEM253-203ENST00000554329 TTLL1O95922 423 aa13.73□□□□□ -0.21
TMEM253-203ENST00000554329 MCCP23508 829 aa13.73□□□□□ -0.21
TMEM253-203ENST00000554329 CCND3P30281 292 aaPredicted RBP13.73□□□□□ -0.21
TMEM253-203ENST00000554329 UBXN2AP68543 259 aa13.73□□□□□ -0.21
TMEM253-203ENST00000554329 PTH1RQ03431 593 aa13.73□□□□□ -0.21
TMEM253-203ENST00000554329 IRF5Q13568 498 aa13.73□□□□□ -0.21
TMEM253-203ENST00000554329 ALX1Q15699 326 aa13.73□□□□□ -0.21
TMEM253-203ENST00000554329 CPXCR1Q8N123 301 aa13.73□□□□□ -0.21
TMEM253-203ENST00000554329 ANAPC4Q9UJX5 808 aa13.73□□□□□ -0.21
TMEM253-203ENST00000554329 PPP1R9AQ9ULJ8 1098 aa13.73□□□□□ -0.21
TMEM253-203ENST00000554329 ZNFX1Q9P2E3 1918 aaKnown RBP13.72□□□□□ -0.21
TMEM253-203ENST00000554329 PGK2P07205 417 aa13.72□□□□□ -0.21
TMEM253-203ENST00000554329 PRKAR2AP13861 404 aaKnown RBP13.72□□□□□ -0.21
TMEM253-203ENST00000554329 PTPREP23469 700 aa13.72□□□□□ -0.21
TMEM253-203ENST00000554329 CHMLP26374 656 aa13.72□□□□□ -0.21
TMEM253-203ENST00000554329 IKQ13123 557 aaPredicted RBP13.72□□□□□ -0.21
TMEM253-203ENST00000554329 MAP2K5Q13163 448 aa13.72□□□□□ -0.21
TMEM253-203ENST00000554329 ANO1Q5XXA6 986 aa13.72□□□□□ -0.21
TMEM253-203ENST00000554329 REPS2Q8NFH8 660 aa13.72□□□□□ -0.21
TMEM253-203ENST00000554329 DIS3LQ8TF46 1054 aaKnown RBP13.72□□□□□ -0.21
TMEM253-203ENST00000554329 GTF3C2Q8WUA4 911 aaPredicted RBP13.72□□□□□ -0.21
TMEM253-203ENST00000554329 USP6NLQ92738 828 aa13.72□□□□□ -0.21
TMEM253-203ENST00000554329 SLF1Q9BQI6 1058 aa13.72□□□□□ -0.21
TMEM253-203ENST00000554329 ZNF287Q9HBT7 754 aa13.72□□□□□ -0.21
TMEM253-203ENST00000554329 RAVER2Q9HCJ3 691 aaKnown RBP13.72□□□□□ -0.21
TMEM253-203ENST00000554329 HOXC10Q9NYD6 342 aa13.72□□□□□ -0.21
TMEM253-203ENST00000554329 RIPK3Q9Y572 518 aa13.72□□□□□ -0.21
TMEM253-203ENST00000554329 B4E1Z4 1266 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 TMEM232C9JQI7 657 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 VWA5AO00534 786 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 COBLO75128 1261 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 HMGCRP04035 888 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 BMP3P12645 472 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 ZKSCAN1P17029 563 aaPredicted RBP13.71□□□□□ -0.21
TMEM253-203ENST00000554329 ADORA2AP29274 412 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 CYP2C19P33261 490 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 SLC16A2P36021 539 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 RGS2P41220 211 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 CCNA1P78396 465 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 CACNB2Q08289 660 aaPredicted RBP13.71□□□□□ -0.21
TMEM253-203ENST00000554329 AKNAD1Q5T1N1 836 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 TTBK2Q6IQ55 1244 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 PXYLP1Q8TE99 480 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 U2AF1L4Q8WU68 220 aaKnown RBP13.71□□□□□ -0.21
TMEM253-203ENST00000554329 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.71□□□□□ -0.21
TMEM253-203ENST00000554329 CPVLQ9H3G5 476 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 HOMER2Q9NSB8 354 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
TMEM253-203ENST00000554329 PLXNA1Q9UIW2 1896 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 SMCHD1A6NHR9 2005 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 FRMPD3Q5JV73 1810 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 ZNF213O14771 459 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 ORC4O43929 436 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
TMEM253-203ENST00000554329 GRB14Q14449 540 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 PRAMEF19Q5SWL8 479 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 SNRNP48Q6IEG0 339 aaKnown RBP13.7□□□□□ -0.22
TMEM253-203ENST00000554329 CCDC174Q6PII3 467 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 MFSD6Q6ZSS7 791 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 STAG1Q8WVM7 1258 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 SOCS4Q8WXH5 440 aa13.7□□□□□ -0.22
TMEM253-203ENST00000554329 MKL1Q969V6 931 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms