RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 NSUN2Q08J23 767 aaKnown RBP eCLIP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 BRD3Q15059 726 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 KIF4BQ2VIQ3 1234 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 CCDC152Q4G0S7 254 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 TMEM31Q5JXX7 168 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 VARS2Q5ST30 1063 aaKnown RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 MYSM1Q5VVJ2 828 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 TTC19Q6DKK2 380 aaPredicted RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 ZCCHC8Q6NZY4 707 aaKnown RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 TRIM42Q8IWZ5 723 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 TDHQ8IZJ6 230 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 ZNF280CQ8ND82 737 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 ANKRD20A12PQ8NF67 263 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 ADAMTS19Q8TE59 1207 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 USP33Q8TEY7 942 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 SLC39A13Q96H72 371 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 DHTKD1Q96HY7 919 aaPredicted RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 DHRS1Q96LJ7 313 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 PLEKHG4BQ96PX9 1271 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 UHRF1Q96T88 793 aaPredicted RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 APBA2Q99767 749 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 SLC39A3Q9BRY0 314 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 UTP14AQ9BVJ6 771 aaKnown RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 ZSWIM4Q9H7M6 989 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 KMT5AQ9NQR1 393 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 ADARB2Q9NS39 739 aaKnown RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 SEPT10Q9P0V9 454 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 SPATA7Q9P0W8 599 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 SEL1LQ9UBV2 794 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 SRP68Q9UHB9 627 aaKnown RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 EVLQ9UI08 416 aaPredicted RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 FBXO2Q9UK22 296 aaPredicted RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 RCAN3Q9UKA8 241 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 CFAP45Q9UL16 551 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 COG6Q9Y2V7 657 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 JRKLQ9Y4A0 524 aa5.62□□□□□ -1.51
PFDN5-219ENST00000553171 LRRFIP2Q9Y608 721 aaKnown RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 USP42Q9H9J4 1324 aaKnown RBP5.62□□□□□ -1.51
PFDN5-219ENST00000553171 FLNBO75369 2602 aaKnown RBP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 CPLX1O14810 134 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 SGTAO43765 313 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 ORC4O43929 436 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 DIAPH1O60610 1272 aaKnown RBP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 GPR37L1O60883 481 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 NFAT5O94916 1531 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 SMARCA1P28370 1054 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 HOXC13P31276 330 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 GTF2F1P35269 517 aaKnown RBP eCLIP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 PDE6BP35913 854 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 GNALP38405 381 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 PRPHP41219 470 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 NASPP49321 788 aaPredicted RBP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 RPS6KA3P51812 740 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 FKBP4Q02790 459 aaKnown RBP eCLIP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 RAD51AP2Q09MP3 1159 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 ZBTB17Q13105 803 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 BECN1Q14457 450 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 POSTNQ15063 836 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 CNGA3Q16281 694 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 DBN1Q16643 649 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 TMEM95Q3KNT9 176 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 CCDC122Q5T0U0 273 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 HHATQ5VTY9 493 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 ARMC3Q5W041 872 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 ZNF746Q6NUN9 644 aaPredicted RBP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 CCBE1Q6UXH8 406 aaPredicted RBP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 CENPQQ7L2Z9 268 aaPredicted RBP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 RASAL3Q86YV0 1011 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 ANKRD18AQ8IVF6 992 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 KRT222Q8N1A0 295 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 GAS2L2Q8NHY3 880 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 C7orf43Q8WVR3 580 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 MAML1Q92585 1016 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 USP6NLQ92738 828 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 DDX12PQ92771 950 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 FAM161BQ96MY7 647 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 TCHPQ9BT92 498 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 SRRTQ9BXP5 876 aaKnown RBP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 CNTNAP4Q9C0A0 1308 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 ZNF277Q9NRM2 450 aaPredicted RBP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 PLA2G2EQ9NZK7 142 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 PRKAG2Q9UGJ0 569 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 RRP15Q9Y3B9 282 aaKnown RBP5.61□□□□□ -1.51
PFDN5-219ENST00000553171 PRKAB1Q9Y478 270 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 CFAP54Q96N23 3096 aa5.61□□□□□ -1.51
PFDN5-219ENST00000553171 MAP3K19Q56UN5 1328 aa5.6□□□□□ -1.51
PFDN5-219ENST00000553171 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.6□□□□□ -1.51
PFDN5-219ENST00000553171 UQCRHLA0A096LP55 91 aa5.6□□□□□ -1.51
PFDN5-219ENST00000553171 A0A1B0GUL7 405 aa5.6□□□□□ -1.51
PFDN5-219ENST00000553171 PER1O15534 1290 aaPredicted RBP5.6□□□□□ -1.51
PFDN5-219ENST00000553171 SMC2O95347 1197 aa5.6□□□□□ -1.51
PFDN5-219ENST00000553171 UQCRHP07919 91 aa5.6□□□□□ -1.51
PFDN5-219ENST00000553171 PDGFRBP09619 1106 aa5.6□□□□□ -1.51
PFDN5-219ENST00000553171 MYCLP1P12525 358 aaPredicted RBP5.6□□□□□ -1.51
PFDN5-219ENST00000553171 IDEP14735 1019 aa5.6□□□□□ -1.51
PFDN5-219ENST00000553171 OAS2P29728 719 aaKnown RBP5.6□□□□□ -1.51
PFDN5-219ENST00000553171 PAPOLAP51003 745 aaKnown RBP5.6□□□□□ -1.51
PFDN5-219ENST00000553171 ZBED6P86452 979 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms