RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 PIK3AP1Q6ZUJ8 805 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 CCDC17Q96LX7 622 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 CLIC6Q96NY7 704 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 UBA5Q9GZZ9 404 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 GPCPD1Q9NPB8 672 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 PSME4Q14997 1843 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 PLIN4Q96Q06 1357 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 ZNF646O15015 1829 aaPredicted RBP9.48□□□□□ -0.89
RAB5B-210ENST00000553116 CCDC194A0A1B0GVG4 234 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 MYO1BO43795 1136 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 GDF11O95390 407 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 VEGFAP15692 232 aaPredicted RBP9.48□□□□□ -0.89
RAB5B-210ENST00000553116 PFKFB1P16118 471 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 SYKP43405 635 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 PPP4R3BQ5MIZ7 849 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 SHISA4Q96DD7 197 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 CYTH3O43739 400 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 PDHBP11177 359 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 CMA1P23946 247 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 TOB1P50616 345 aaPredicted RBP9.47□□□□□ -0.89
RAB5B-210ENST00000553116 SNW1Q13573 536 aaKnown RBP9.47□□□□□ -0.89
RAB5B-210ENST00000553116 PTPAQ15257 358 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 ANO6Q4KMQ2 910 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 SPECC1Q5M775 1068 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 BLIDQ8IZY5 108 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 CCDC12Q8WUD4 166 aaPredicted RBP9.47□□□□□ -0.89
RAB5B-210ENST00000553116 SPDYE2BA6NHP3 402 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 CUTAO60888 179 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 VIL1P09327 827 aaKnown RBP9.47□□□□□ -0.89
RAB5B-210ENST00000553116 SPDYE6P0CI01 402 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 ASPRV1Q53RT3 343 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 AXDND1Q5T1B0 1012 aaPredicted RBP9.47□□□□□ -0.89
RAB5B-210ENST00000553116 WWC2Q6AWC2 1192 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 CIAPIN1Q6FI81 312 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 ERCC4Q92889 916 aaPredicted RBP9.47□□□□□ -0.89
RAB5B-210ENST00000553116 SPZ1Q9BXG8 430 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 FAM13BQ9NYF5 915 aa9.47□□□□□ -0.89
RAB5B-210ENST00000553116 ENTPD3O75355 529 aa9.46□□□□□ -0.89
RAB5B-210ENST00000553116 ZNF202O95125 648 aa9.46□□□□□ -0.89
RAB5B-210ENST00000553116 ICA1Q05084 483 aa9.46□□□□□ -0.89
RAB5B-210ENST00000553116 ZNF174Q15697 407 aa9.46□□□□□ -0.89
RAB5B-210ENST00000553116 TTC38Q5R3I4 469 aa9.46□□□□□ -0.89
RAB5B-210ENST00000553116 FOXP4Q8IVH2 680 aaPredicted RBP9.46□□□□□ -0.89
RAB5B-210ENST00000553116 FMR1NBQ8N0W7 255 aaPredicted RBP9.46□□□□□ -0.89
RAB5B-210ENST00000553116 RASGRP4Q8TDF6 673 aa9.46□□□□□ -0.89
RAB5B-210ENST00000553116 VPS33BQ9H267 617 aa9.46□□□□□ -0.89
RAB5B-210ENST00000553116 DNAJC18Q9H819 358 aa9.46□□□□□ -0.89
RAB5B-210ENST00000553116 COL4A5P29400 1685 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 CXCL9Q07325 125 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 ABCB5Q2M3G0 1257 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 EARS2Q5JPH6 523 aaKnown RBP9.46□□□□□ -0.9
RAB5B-210ENST00000553116 ENGASEQ8NFI3 743 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 PIGSQ96S52 555 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 FUCA2Q9BTY2 467 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 SH3GLB2Q9NR46 395 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 PCDHA4Q9UN74 947 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 IKQ13123 557 aaPredicted RBP9.46□□□□□ -0.9
RAB5B-210ENST00000553116 NOM1Q5C9Z4 860 aaKnown RBP9.46□□□□□ -0.9
RAB5B-210ENST00000553116 RBM26Q5T8P6 1007 aaKnown RBP9.46□□□□□ -0.9
RAB5B-210ENST00000553116 SH3BP5LQ7L8J4 393 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 FAM200AQ8TCP9 573 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 DNAJC25Q9H1X3 360 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.46□□□□□ -0.9
RAB5B-210ENST00000553116 BARHL2Q9NY43 387 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 ZNF70Q9UC06 446 aaPredicted RBP9.46□□□□□ -0.9
RAB5B-210ENST00000553116 USP25Q9UHP3 1055 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 MRVI1Q9Y6F6 885 aa9.46□□□□□ -0.9
RAB5B-210ENST00000553116 BMP15O95972 392 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 PTMAP06454 111 aaKnown RBP9.45□□□□□ -0.9
RAB5B-210ENST00000553116 MCM7P33993 719 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 SEPT2Q15019 361 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 SHROOM1Q2M3G4 852 aaPredicted RBP9.45□□□□□ -0.9
RAB5B-210ENST00000553116 SHC4Q6S5L8 630 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 KCTD1Q719H9 257 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 AGBL3Q8NEM8 1001 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 KANSL2Q9H9L4 492 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.45□□□□□ -0.9
RAB5B-210ENST00000553116 GJA3Q9Y6H8 435 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 IGKV6D-41A0A0C4DH26 115 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 STXBP3O00186 592 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 EEF2P13639 858 aaKnown RBP9.45□□□□□ -0.9
RAB5B-210ENST00000553116 SLC1A4P43007 532 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 STX1AQ16623 288 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 UVSSAQ2YD98 709 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 TMEM179Q6ZVK1 233 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 FAM43AQ8N2R8 423 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 C6orf50Q9HD87 102 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 SIPA1L1O43166 1804 aa9.45□□□□□ -0.9
RAB5B-210ENST00000553116 GNA11P29992 359 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 TNIP1Q15025 636 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 SLC35G1Q2M3R5 365 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 RESP18Q5W5W9 173 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 RBM43Q6ZSC3 357 aaKnown RBP9.44□□□□□ -0.9
RAB5B-210ENST00000553116 PDILTQ8N807 584 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 CNNM3Q8NE01 707 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 KCNH3Q9ULD8 1083 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 UTRNP46939 3433 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 SMCO2A6NFE2 343 aa9.44□□□□□ -0.9
RAB5B-210ENST00000553116 GH2P01242 217 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms