RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 ECHDC1Q9NTX5 307 aa19.37■□□□□ 0.69
CALCOCO1-220ENST00000552282 ZNF214Q9UL59 606 aaPredicted RBP19.37■□□□□ 0.69
CALCOCO1-220ENST00000552282 DIS3Q9Y2L1 958 aaKnown RBP19.37■□□□□ 0.69
CALCOCO1-220ENST00000552282 CYP2D7A0A087X1C5 515 aa19.36■□□□□ 0.69
CALCOCO1-220ENST00000552282 EEF2P13639 858 aaKnown RBP19.36■□□□□ 0.69
CALCOCO1-220ENST00000552282 TMEM132BQ14DG7 1078 aa19.36■□□□□ 0.69
CALCOCO1-220ENST00000552282 KBTBD3Q8NAB2 608 aa19.36■□□□□ 0.69
CALCOCO1-220ENST00000552282 ARRDC4Q8NCT1 418 aa19.36■□□□□ 0.69
CALCOCO1-220ENST00000552282 REPS2Q8NFH8 660 aa19.36■□□□□ 0.69
CALCOCO1-220ENST00000552282 STRBPQ96SI9 672 aaKnown RBP19.36■□□□□ 0.69
CALCOCO1-220ENST00000552282 UBE2OQ9C0C9 1292 aaKnown RBP19.36■□□□□ 0.69
CALCOCO1-220ENST00000552282 PPP1R9AQ9ULJ8 1098 aa19.36■□□□□ 0.69
CALCOCO1-220ENST00000552282 SYNPO2Q9UMS6 1093 aa19.36■□□□□ 0.69
CALCOCO1-220ENST00000552282 SLC4A4Q9Y6R1 1079 aa19.36■□□□□ 0.69
CALCOCO1-220ENST00000552282 FCER1AP12319 257 aa19.35■□□□□ 0.69
CALCOCO1-220ENST00000552282 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.35■□□□□ 0.69
CALCOCO1-220ENST00000552282 SPICE1Q8N0Z3 855 aa19.35■□□□□ 0.69
CALCOCO1-220ENST00000552282 SENP6Q9GZR1 1112 aaPredicted RBP19.35■□□□□ 0.69
CALCOCO1-220ENST00000552282 DCTPP1Q9H773 170 aa19.35■□□□□ 0.69
CALCOCO1-220ENST00000552282 GOPCQ9HD26 462 aa19.35■□□□□ 0.69
CALCOCO1-220ENST00000552282 VWA5AO00534 786 aa19.34■□□□□ 0.69
CALCOCO1-220ENST00000552282 ZFYP08048 801 aaPredicted RBP19.34■□□□□ 0.69
CALCOCO1-220ENST00000552282 C20orf194Q5TEA3 1177 aa19.34■□□□□ 0.69
CALCOCO1-220ENST00000552282 APPBP2Q92624 585 aa19.34■□□□□ 0.69
CALCOCO1-220ENST00000552282 NYAP2Q9P242 653 aa19.34■□□□□ 0.69
CALCOCO1-220ENST00000552282 PLIN4Q96Q06 1357 aa19.33■□□□□ 0.69
CALCOCO1-220ENST00000552282 IGKV6D-41A0A0C4DH26 115 aa19.33■□□□□ 0.68
CALCOCO1-220ENST00000552282 GSG1L2A8MUP6 293 aa19.33■□□□□ 0.68
CALCOCO1-220ENST00000552282 RASA1P20936 1047 aa19.33■□□□□ 0.68
CALCOCO1-220ENST00000552282 CNGA1P29973 690 aa19.33■□□□□ 0.68
CALCOCO1-220ENST00000552282 NCAPG2Q86XI2 1143 aa19.33■□□□□ 0.68
CALCOCO1-220ENST00000552282 UNC80Q8N2C7 3258 aa19.33■□□□□ 0.68
CALCOCO1-220ENST00000552282 MYH4Q9Y623 1939 aa19.32■□□□□ 0.68
CALCOCO1-220ENST00000552282 ATP2A1O14983 1001 aa19.32■□□□□ 0.68
CALCOCO1-220ENST00000552282 ZNF792Q3KQV3 632 aa19.32■□□□□ 0.68
CALCOCO1-220ENST00000552282 FAM109BQ6ICB4 259 aaPredicted RBP19.32■□□□□ 0.68
CALCOCO1-220ENST00000552282 MSL3Q8N5Y2 521 aaKnown RBP19.32■□□□□ 0.68
CALCOCO1-220ENST00000552282 OSBP2Q969R2 916 aa19.32■□□□□ 0.68
CALCOCO1-220ENST00000552282 FBXO28Q9NVF7 368 aa19.32■□□□□ 0.68
CALCOCO1-220ENST00000552282 CUL9Q8IWT3 2517 aa19.31■□□□□ 0.68
CALCOCO1-220ENST00000552282 KBTBD13C9JR72 458 aa19.31■□□□□ 0.68
CALCOCO1-220ENST00000552282 GNAT2P19087 354 aa19.31■□□□□ 0.68
CALCOCO1-220ENST00000552282 RTP1P59025 263 aa19.31■□□□□ 0.68
CALCOCO1-220ENST00000552282 PLS1Q14651 629 aa19.31■□□□□ 0.68
CALCOCO1-220ENST00000552282 SLC39A5Q6ZMH5 540 aa19.31■□□□□ 0.68
CALCOCO1-220ENST00000552282 GPATCH3Q96I76 525 aa19.31■□□□□ 0.68
CALCOCO1-220ENST00000552282 EPB41L4AQ9HCS5 686 aaPredicted RBP19.31■□□□□ 0.68
CALCOCO1-220ENST00000552282 MTMR10Q9NXD2 777 aa19.31■□□□□ 0.68
CALCOCO1-220ENST00000552282 STXBP5LQ9Y2K9 1186 aa19.31■□□□□ 0.68
CALCOCO1-220ENST00000552282 SMCHD1A6NHR9 2005 aa19.3■□□□□ 0.68
CALCOCO1-220ENST00000552282 SMARCA5O60264 1052 aaPredicted RBP19.3■□□□□ 0.68
CALCOCO1-220ENST00000552282 STAT3P40763 770 aa19.3■□□□□ 0.68
CALCOCO1-220ENST00000552282 LRRC41Q15345 812 aa19.3■□□□□ 0.68
CALCOCO1-220ENST00000552282 GJC2Q5T442 439 aaPredicted RBP19.3■□□□□ 0.68
CALCOCO1-220ENST00000552282 DEFB123Q8N688 67 aa19.3■□□□□ 0.68
CALCOCO1-220ENST00000552282 MKL1Q969V6 931 aa19.3■□□□□ 0.68
CALCOCO1-220ENST00000552282 MMP19Q99542 508 aa19.3■□□□□ 0.68
CALCOCO1-220ENST00000552282 TINF2Q9BSI4 451 aa19.3■□□□□ 0.68
CALCOCO1-220ENST00000552282 TEX13BQ9BXU2 312 aa19.3■□□□□ 0.68
CALCOCO1-220ENST00000552282 PHF24Q9UPV7 400 aa19.3■□□□□ 0.68
CALCOCO1-220ENST00000552282 TTC41PQ6P2S7 1318 aa19.29■□□□□ 0.68
CALCOCO1-220ENST00000552282 POTEB2H3BUK9 544 aa19.29■□□□□ 0.68
CALCOCO1-220ENST00000552282 RNF113AO15541 343 aaKnown RBP19.29■□□□□ 0.68
CALCOCO1-220ENST00000552282 MDM2Q00987 491 aaPredicted RBP19.29■□□□□ 0.68
CALCOCO1-220ENST00000552282 KCTD2Q14681 263 aa19.29■□□□□ 0.68
CALCOCO1-220ENST00000552282 FAM47AQ5JRC9 791 aa19.29■□□□□ 0.68
CALCOCO1-220ENST00000552282 FAM83BQ5T0W9 1011 aa19.29■□□□□ 0.68
CALCOCO1-220ENST00000552282 DNAJC25-GNG10A0A024R161 153 aa19.28■□□□□ 0.68
CALCOCO1-220ENST00000552282 GPAA1O43292 621 aa19.28■□□□□ 0.68
CALCOCO1-220ENST00000552282 ATN1P54259 1190 aaPredicted RBP19.28■□□□□ 0.68
CALCOCO1-220ENST00000552282 LRRFIP1Q32MZ4 808 aaKnown RBP19.28■□□□□ 0.68
CALCOCO1-220ENST00000552282 MAMDC4Q6UXC1 1216 aa19.28■□□□□ 0.68
CALCOCO1-220ENST00000552282 ZNF467Q7Z7K2 595 aaPredicted RBP19.28■□□□□ 0.68
CALCOCO1-220ENST00000552282 LBHD1Q9BQE6 289 aaPredicted RBP19.28■□□□□ 0.68
CALCOCO1-220ENST00000552282 SLF1Q9BQI6 1058 aa19.28■□□□□ 0.68
CALCOCO1-220ENST00000552282 ZNF287Q9HBT7 754 aa19.28■□□□□ 0.68
CALCOCO1-220ENST00000552282 CDH23Q9H251 3354 aa19.27■□□□□ 0.68
CALCOCO1-220ENST00000552282 SYNGAP1Q96PV0 1343 aa19.27■□□□□ 0.68
CALCOCO1-220ENST00000552282 F5H6K3 240 aa19.27■□□□□ 0.68
CALCOCO1-220ENST00000552282 NDUFB10O96000 172 aa19.27■□□□□ 0.68
CALCOCO1-220ENST00000552282 ZNF865P0CJ78 1059 aaPredicted RBP19.27■□□□□ 0.68
CALCOCO1-220ENST00000552282 KLRC3Q07444 240 aa19.27■□□□□ 0.68
CALCOCO1-220ENST00000552282 PRPF38AQ8NAV1 312 aaKnown RBP19.27■□□□□ 0.68
CALCOCO1-220ENST00000552282 GMCL1P1Q8NEA9 526 aa19.27■□□□□ 0.68
CALCOCO1-220ENST00000552282 PDLIM7Q9NR12 457 aa19.27■□□□□ 0.68
CALCOCO1-220ENST00000552282 PRKAG2Q9UGJ0 569 aa19.27■□□□□ 0.68
CALCOCO1-220ENST00000552282 RARBP10826 455 aa19.26■□□□□ 0.67
CALCOCO1-220ENST00000552282 AKR1A1P14550 325 aa19.26■□□□□ 0.67
CALCOCO1-220ENST00000552282 OAZ1P54368 228 aa19.26■□□□□ 0.67
CALCOCO1-220ENST00000552282 PRAMEF19Q5SWL8 479 aa19.26■□□□□ 0.67
CALCOCO1-220ENST00000552282 MKNK2Q9HBH9 465 aa19.26■□□□□ 0.67
CALCOCO1-220ENST00000552282 XPNPEP3Q9NQH7 507 aa19.26■□□□□ 0.67
CALCOCO1-220ENST00000552282 ADAMTS4O75173 837 aa19.25■□□□□ 0.67
CALCOCO1-220ENST00000552282 PGK2P07205 417 aa19.25■□□□□ 0.67
CALCOCO1-220ENST00000552282 Q7L0L9 218 aa19.25■□□□□ 0.67
CALCOCO1-220ENST00000552282 RNF180Q86T96 592 aa19.25■□□□□ 0.67
CALCOCO1-220ENST00000552282 PI4K2BQ8TCG2 481 aa19.25■□□□□ 0.67
CALCOCO1-220ENST00000552282 TSEN34Q9BSV6 310 aaKnown RBP19.25■□□□□ 0.67
CALCOCO1-220ENST00000552282 SLC38A10Q9HBR0 1119 aa19.25■□□□□ 0.67
CALCOCO1-220ENST00000552282 MTMR4Q9NYA4 1195 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms