RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 ABRAQ8N0Z2 381 aa24.17■■□□□ 1.46
SLC48A1-208ENST00000551301 SEC62Q99442 399 aaKnown RBP24.17■■□□□ 1.46
SLC48A1-208ENST00000551301 C11orf49Q9H6J7 331 aa24.17■■□□□ 1.46
SLC48A1-208ENST00000551301 CLIP2Q9UDT6 1046 aa24.17■■□□□ 1.46
SLC48A1-208ENST00000551301 COLQQ9Y215 455 aaPredicted RBP24.17■■□□□ 1.46
SLC48A1-208ENST00000551301 PRDM1O75626 825 aa24.16■■□□□ 1.46
SLC48A1-208ENST00000551301 TSPY3P0CV98 308 aa24.16■■□□□ 1.46
SLC48A1-208ENST00000551301 TSPY8P0CW00 308 aa24.16■■□□□ 1.46
SLC48A1-208ENST00000551301 CNGA1P29973 690 aa24.16■■□□□ 1.46
SLC48A1-208ENST00000551301 PPP4R3BQ5MIZ7 849 aa24.16■■□□□ 1.46
SLC48A1-208ENST00000551301 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.16■■□□□ 1.46
SLC48A1-208ENST00000551301 PPP1R9AQ9ULJ8 1098 aa24.16■■□□□ 1.46
SLC48A1-208ENST00000551301 SYNPO2Q9UMS6 1093 aa24.16■■□□□ 1.46
SLC48A1-208ENST00000551301 CTDP1Q9Y5B0 961 aaPredicted RBP24.16■■□□□ 1.46
SLC48A1-208ENST00000551301 SALL3Q9BXA9 1300 aa24.15■■□□□ 1.46
SLC48A1-208ENST00000551301 F5H6K3 240 aa24.15■■□□□ 1.46
SLC48A1-208ENST00000551301 CCND3P30281 292 aaPredicted RBP24.15■■□□□ 1.46
SLC48A1-208ENST00000551301 KLRC3Q07444 240 aa24.15■■□□□ 1.46
SLC48A1-208ENST00000551301 DIS3LQ8TF46 1054 aaKnown RBP24.15■■□□□ 1.46
SLC48A1-208ENST00000551301 RLFQ13129 1914 aa24.14■■□□□ 1.46
SLC48A1-208ENST00000551301 A0A0G2JMZ2 1700 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 VWA5AO00534 786 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 TTLL1O95922 423 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 PPARAQ07869 468 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 TMEM132BQ14DG7 1078 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 OLFML2BQ68BL8 750 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 CHRDL2Q6WN34 429 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 SLF1Q9BQI6 1058 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 HELLSQ9NRZ9 838 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 FBXO28Q9NVF7 368 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 FLRT1Q9NZU1 646 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 ADAMTS5Q9UNA0 930 aa24.14■■□□□ 1.45
SLC48A1-208ENST00000551301 TRIOBPQ9H2D6 2365 aa24.13■■□□□ 1.45
SLC48A1-208ENST00000551301 STAT3P40763 770 aa24.13■■□□□ 1.45
SLC48A1-208ENST00000551301 KCTD2Q14681 263 aa24.13■■□□□ 1.45
SLC48A1-208ENST00000551301 PRPF38AQ8NAV1 312 aaKnown RBP24.13■■□□□ 1.45
SLC48A1-208ENST00000551301 NPLOC4Q8TAT6 608 aa24.13■■□□□ 1.45
SLC48A1-208ENST00000551301 LNPKQ9C0E8 428 aa24.13■■□□□ 1.45
SLC48A1-208ENST00000551301 MTMR4Q9NYA4 1195 aa24.13■■□□□ 1.45
SLC48A1-208ENST00000551301 NDUFB10O96000 172 aa24.12■■□□□ 1.45
SLC48A1-208ENST00000551301 CYP2C19P33261 490 aa24.12■■□□□ 1.45
SLC48A1-208ENST00000551301 RIOX2Q8IUF8 465 aa24.12■■□□□ 1.45
SLC48A1-208ENST00000551301 NEDD1Q8NHV4 660 aa24.12■■□□□ 1.45
SLC48A1-208ENST00000551301 MKL1Q969V6 931 aa24.12■■□□□ 1.45
SLC48A1-208ENST00000551301 CEP95Q96GE4 821 aa24.12■■□□□ 1.45
SLC48A1-208ENST00000551301 MMP19Q99542 508 aa24.12■■□□□ 1.45
SLC48A1-208ENST00000551301 ZNF236Q9UL36 1845 aa24.12■■□□□ 1.45
SLC48A1-208ENST00000551301 GREB1LQ9C091 1923 aaPredicted RBP24.12■■□□□ 1.45
SLC48A1-208ENST00000551301 TRIM6-TRIM34B2RNG4 842 aa24.11■■□□□ 1.45
SLC48A1-208ENST00000551301 ZBED4O75132 1171 aa24.11■■□□□ 1.45
SLC48A1-208ENST00000551301 TFAP4Q01664 338 aa24.11■■□□□ 1.45
SLC48A1-208ENST00000551301 LHX8Q68G74 356 aa24.11■■□□□ 1.45
SLC48A1-208ENST00000551301 B4GALNT3Q6L9W6 998 aa24.11■■□□□ 1.45
SLC48A1-208ENST00000551301 DDX20Q9UHI6 824 aaKnown RBP24.11■■□□□ 1.45
SLC48A1-208ENST00000551301 ISY1Q9ULR0 285 aaKnown RBP24.11■■□□□ 1.45
SLC48A1-208ENST00000551301 IGKV6D-41A0A0C4DH26 115 aa24.1■■□□□ 1.45
SLC48A1-208ENST00000551301 CCDC129Q6ZRS4 1044 aa24.1■■□□□ 1.45
SLC48A1-208ENST00000551301 SMC5Q8IY18 1101 aa24.1■■□□□ 1.45
SLC48A1-208ENST00000551301 NUP88Q99567 741 aaPredicted RBP24.1■■□□□ 1.45
SLC48A1-208ENST00000551301 TEX13BQ9BXU2 312 aa24.1■■□□□ 1.45
SLC48A1-208ENST00000551301 FEM1BQ9UK73 627 aa24.1■■□□□ 1.45
SLC48A1-208ENST00000551301 PLIN4Q96Q06 1357 aa24.09■■□□□ 1.45
SLC48A1-208ENST00000551301 TSPY2A6NKD2 308 aa24.09■■□□□ 1.45
SLC48A1-208ENST00000551301 MCMDC2Q4G0Z9 681 aa24.09■■□□□ 1.45
SLC48A1-208ENST00000551301 FAM47AQ5JRC9 791 aa24.09■■□□□ 1.45
SLC48A1-208ENST00000551301 C7orf61Q8IZ16 206 aa24.09■■□□□ 1.45
SLC48A1-208ENST00000551301 GMCL1P1Q8NEA9 526 aa24.09■■□□□ 1.45
SLC48A1-208ENST00000551301 PARP14Q460N5 1801 aa24.09■■□□□ 1.45
SLC48A1-208ENST00000551301 MYH4Q9Y623 1939 aa24.08■■□□□ 1.45
SLC48A1-208ENST00000551301 COBLO75128 1261 aa24.08■■□□□ 1.45
SLC48A1-208ENST00000551301 MFAP1P55081 439 aaKnown RBP24.08■■□□□ 1.45
SLC48A1-208ENST00000551301 CHD1LQ86WJ1 897 aa24.08■■□□□ 1.45
SLC48A1-208ENST00000551301 ARRDC4Q8NCT1 418 aa24.08■■□□□ 1.45
SLC48A1-208ENST00000551301 RILPL2Q969X0 211 aa24.08■■□□□ 1.45
SLC48A1-208ENST00000551301 ZNF214Q9UL59 606 aaPredicted RBP24.08■■□□□ 1.45
SLC48A1-208ENST00000551301 CYBAP13498 195 aa24.07■■□□□ 1.44
SLC48A1-208ENST00000551301 MNX1P50219 401 aaPredicted RBP24.07■■□□□ 1.44
SLC48A1-208ENST00000551301 SLFN13Q68D06 897 aa24.07■■□□□ 1.44
SLC48A1-208ENST00000551301 SNRNP48Q6IEG0 339 aaKnown RBP24.07■■□□□ 1.44
SLC48A1-208ENST00000551301 LRRC47Q8N1G4 583 aaKnown RBP24.07■■□□□ 1.44
SLC48A1-208ENST00000551301 KIFC2Q96AC6 838 aa24.07■■□□□ 1.44
SLC48A1-208ENST00000551301 MAML3Q96JK9 1138 aa24.07■■□□□ 1.44
SLC48A1-208ENST00000551301 COL11A1P12107 1806 aaPredicted RBP24.07■■□□□ 1.44
SLC48A1-208ENST00000551301 RANBP6O60518 1105 aaKnown RBP24.06■■□□□ 1.44
SLC48A1-208ENST00000551301 FDX1P10109 184 aa24.06■■□□□ 1.44
SLC48A1-208ENST00000551301 BMP3P12645 472 aa24.06■■□□□ 1.44
SLC48A1-208ENST00000551301 IKQ13123 557 aaPredicted RBP24.06■■□□□ 1.44
SLC48A1-208ENST00000551301 ALX1Q15699 326 aa24.06■■□□□ 1.44
SLC48A1-208ENST00000551301 EXOC6Q8TAG9 804 aa24.06■■□□□ 1.44
SLC48A1-208ENST00000551301 DDX11Q96FC9 970 aa24.06■■□□□ 1.44
SLC48A1-208ENST00000551301 NRBP1Q9UHY1 535 aa24.06■■□□□ 1.44
SLC48A1-208ENST00000551301 ANAPC4Q9UJX5 808 aa24.06■■□□□ 1.44
SLC48A1-208ENST00000551301 STX8Q9UNK0 236 aa24.06■■□□□ 1.44
SLC48A1-208ENST00000551301 DIS3Q9Y2L1 958 aaKnown RBP24.06■■□□□ 1.44
SLC48A1-208ENST00000551301 SLC4A3P48751 1232 aa24.05■■□□□ 1.44
SLC48A1-208ENST00000551301 CTDSPL2Q05D32 466 aa24.05■■□□□ 1.44
SLC48A1-208ENST00000551301 CPXCR1Q8N123 301 aa24.05■■□□□ 1.44
SLC48A1-208ENST00000551301 REPS2Q8NFH8 660 aa24.05■■□□□ 1.44
SLC48A1-208ENST00000551301 CHURC1Q8WUH1 139 aa24.05■■□□□ 1.44
SLC48A1-208ENST00000551301 TOMM22Q9NS69 142 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms