RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 GRIN2DO15399 1336 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 NEDD4P46934 1319 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 CDHR2Q9BYE9 1310 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 CUTAO60888 179 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 IPO7O95373 1038 aaKnown RBP6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 LARGE1O95461 756 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 U2AF1L5P0DN76 240 aaPredicted RBP6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 NPR3P17342 541 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 GJB2P29033 226 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 PRPHP41219 470 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 IRAK1P51617 712 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 RPS6KA3P51812 740 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 U2AF1Q01081 240 aaKnown RBP eCLIP6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 KRT76Q01546 638 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 TNP2Q05952 138 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 KCNA1Q09470 495 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 RESTQ13127 1097 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 ZNF211Q13398 564 aaPredicted RBP6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 MTMR3Q13615 1198 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 CASP8Q14790 479 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 ECM1Q16610 540 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 HIF1AQ16665 826 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 C1QTNF12Q5T7M4 302 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 TTC19Q6DKK2 380 aaPredicted RBP6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 FIGNL1Q6PIW4 674 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 TTLL7Q6ZT98 887 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 BTLAQ7Z6A9 289 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 DRAXINQ8NBI3 349 aaPredicted RBP6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 GIMAP7Q8NHV1 300 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 MICAL1Q8TDZ2 1067 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 DDX11Q96FC9 970 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 ABHD17AQ96GS6 310 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 PNKPQ96T60 521 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 SLX1AQ9BQ83 275 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 UPF3BQ9BZI7 483 aaKnown RBP6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 TRIM6Q9C030 488 aaPredicted RBP6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 GBP3Q9H0R5 595 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 HSD3B7Q9H2F3 369 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 ATP6V0A4Q9HBG4 840 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 ABCB6Q9NP58 842 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 HOMER3Q9NSC5 361 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 ANO10Q9NW15 660 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 EGFL7Q9UHF1 273 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 RCOR1Q9UKL0 485 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 PCDHGC4Q9Y5F7 938 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 SETD1AO15047 1707 aaKnown RBP6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 CRYBG1Q9Y4K1 1723 aa6.04□□□□□ -1.44
LSM3P2-201ENST00000551246 MAGI1Q96QZ7 1491 aaPredicted RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 DCDC2BA2VCK2 349 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 EME2A4GXA9 379 aaPredicted RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 ANKRD65E5RJM6 399 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 GOLGA6L19H0YKK7 550 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 ZBTB39O15060 712 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 ATXN7O15265 892 aaPredicted RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 ZSCAN12O43309 604 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 MYO1BO43795 1136 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 ZEB2O60315 1214 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 WFS1O76024 890 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 URI1O94763 535 aaPredicted RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 IFIT2P09913 472 aaKnown RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 MAPTP10636 758 aaKnown RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 MAGEA8P43361 318 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 LIG3P49916 1009 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 CAMK4Q16566 473 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 FOXD4L6Q3SYB3 417 aaPredicted RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 RNFT1Q5M7Z0 435 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 TREML4Q6UXN2 200 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 FOXD4L3Q6VB84 417 aaPredicted RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 FAM228AQ86W67 206 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 AFAP1L1Q8TED9 768 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 SLC16A10Q8TF71 515 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 IRF7Q92985 503 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 IFT43Q96FT9 208 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 WDR24Q96S15 920 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 JPH2Q9BR39 696 aaPredicted RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 MMTAG2Q9BU76 263 aaKnown RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 CFHR5Q9BXR6 569 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 IL25Q9H293 177 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 BICC1Q9H694 974 aaKnown RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 BATF3Q9NR55 127 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 STRN4Q9NRL3 753 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 STIM2Q9P246 746 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 ANKIB1Q9P2G1 1089 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 ATXN7L1Q9ULK2 861 aaPredicted RBP6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 SYCP2Q9BX26 1530 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 MAP3K4Q9Y6R4 1608 aa6.03□□□□□ -1.44
LSM3P2-201ENST00000551246 CD163L1Q9NR16 1453 aa6.02□□□□□ -1.44
LSM3P2-201ENST00000551246 RPGRIP1LQ68CZ1 1315 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 USP42Q9H9J4 1324 aaKnown RBP6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 VWDEQ8N2E2 1590 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 A6NNZ2 444 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 LRRIQ3A6PVS8 624 aaPredicted RBP6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 AGPSO00116 658 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 EBAG9O00559 213 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 IKBKBO14920 756 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 EIF3HO15372 352 aaKnown RBP eCLIP6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 MAFGO15525 162 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 ARHGAP6O43182 974 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 ICMTO60725 284 aa6.02□□□□□ -1.45
LSM3P2-201ENST00000551246 KINO60870 393 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms