RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TMEM132BQ14DG7 1078 aa20.83■□□□□ 0.93
CHMP1A-205ENST00000548650 GDF15Q99988 308 aa20.83■□□□□ 0.93
CHMP1A-205ENST00000548650 GOPCQ9HD26 462 aa20.83■□□□□ 0.93
CHMP1A-205ENST00000548650 STAP2Q9UGK3 403 aa20.83■□□□□ 0.93
CHMP1A-205ENST00000548650 ADAMTS5Q9UNA0 930 aa20.83■□□□□ 0.93
CHMP1A-205ENST00000548650 MSCO60682 206 aa20.82■□□□□ 0.92
CHMP1A-205ENST00000548650 SAMD1Q6SPF0 538 aaPredicted RBP20.82■□□□□ 0.92
CHMP1A-205ENST00000548650 DPP9Q86TI2 863 aa20.82■□□□□ 0.92
CHMP1A-205ENST00000548650 NCAPG2Q86XI2 1143 aa20.82■□□□□ 0.92
CHMP1A-205ENST00000548650 ABRAQ8N0Z2 381 aa20.82■□□□□ 0.92
CHMP1A-205ENST00000548650 PPP1R9AQ9ULJ8 1098 aa20.82■□□□□ 0.92
CHMP1A-205ENST00000548650 SALL3Q9BXA9 1300 aa20.81■□□□□ 0.92
CHMP1A-205ENST00000548650 MINDY4BA8MYZ0 360 aa20.81■□□□□ 0.92
CHMP1A-205ENST00000548650 GNAT2P19087 354 aa20.81■□□□□ 0.92
CHMP1A-205ENST00000548650 LRRC26Q2I0M4 334 aa20.81■□□□□ 0.92
CHMP1A-205ENST00000548650 FAM83BQ5T0W9 1011 aa20.81■□□□□ 0.92
CHMP1A-205ENST00000548650 STK11IPQ8N1F8 1099 aa20.81■□□□□ 0.92
CHMP1A-205ENST00000548650 REPS2Q8NFH8 660 aa20.81■□□□□ 0.92
CHMP1A-205ENST00000548650 IGKV6D-41A0A0C4DH26 115 aa20.8■□□□□ 0.92
CHMP1A-205ENST00000548650 ERC2O15083 957 aa20.8■□□□□ 0.92
CHMP1A-205ENST00000548650 SYN1P17600 705 aa20.8■□□□□ 0.92
CHMP1A-205ENST00000548650 TDO2P48775 406 aa20.8■□□□□ 0.92
CHMP1A-205ENST00000548650 ZNF214Q9UL59 606 aaPredicted RBP20.8■□□□□ 0.92
CHMP1A-205ENST00000548650 PLIN4Q96Q06 1357 aa20.8■□□□□ 0.92
CHMP1A-205ENST00000548650 LTBP2Q14767 1821 aa20.8■□□□□ 0.92
CHMP1A-205ENST00000548650 VWA5AO00534 786 aa20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 SOX1O00570 391 aaPredicted RBP20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 SLC25A27O95847 323 aa20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 MX1P20591 662 aa20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 CNGA1P29973 690 aa20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 BMP8BP34820 402 aa20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 RIOX2Q8IUF8 465 aa20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 MAML3Q96JK9 1138 aa20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 SEC62Q99442 399 aaKnown RBP20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 NUP88Q99567 741 aaPredicted RBP20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 MKNK2Q9HBH9 465 aa20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 NYAP2Q9P242 653 aa20.79■□□□□ 0.92
CHMP1A-205ENST00000548650 RAD21O60216 631 aa20.78■□□□□ 0.92
CHMP1A-205ENST00000548650 NDUFB10O96000 172 aa20.78■□□□□ 0.92
CHMP1A-205ENST00000548650 FCER1AP12319 257 aa20.78■□□□□ 0.92
CHMP1A-205ENST00000548650 MAGEA10P43363 369 aaPredicted RBP20.78■□□□□ 0.92
CHMP1A-205ENST00000548650 LRRFIP1Q32MZ4 808 aaKnown RBP20.78■□□□□ 0.92
CHMP1A-205ENST00000548650 IFNL3Q8IZI9 196 aa20.78■□□□□ 0.92
CHMP1A-205ENST00000548650 FSD1Q9BTV5 496 aa20.78■□□□□ 0.92
CHMP1A-205ENST00000548650 SLC5A4Q9NY91 659 aa20.78■□□□□ 0.92
CHMP1A-205ENST00000548650 DNM1LO00429 736 aa20.77■□□□□ 0.92
CHMP1A-205ENST00000548650 PRDM1O75626 825 aa20.77■□□□□ 0.92
CHMP1A-205ENST00000548650 ZMYM1Q5SVZ6 1142 aa20.77■□□□□ 0.92
CHMP1A-205ENST00000548650 SLF1Q9BQI6 1058 aa20.77■□□□□ 0.92
CHMP1A-205ENST00000548650 PATL2C9JE40 543 aaKnown RBP20.76■□□□□ 0.91
CHMP1A-205ENST00000548650 F5H6K3 240 aa20.76■□□□□ 0.91
CHMP1A-205ENST00000548650 SEPT4O43236 478 aa20.76■□□□□ 0.91
CHMP1A-205ENST00000548650 APPP05067 770 aa20.76■□□□□ 0.91
CHMP1A-205ENST00000548650 STAT3P40763 770 aa20.76■□□□□ 0.91
CHMP1A-205ENST00000548650 KLRC3Q07444 240 aa20.76■□□□□ 0.91
CHMP1A-205ENST00000548650 CEP95Q96GE4 821 aa20.76■□□□□ 0.91
CHMP1A-205ENST00000548650 CRBNQ96SW2 442 aa20.76■□□□□ 0.91
CHMP1A-205ENST00000548650 MMP19Q99542 508 aa20.76■□□□□ 0.91
CHMP1A-205ENST00000548650 SMCHD1A6NHR9 2005 aa20.75■□□□□ 0.91
CHMP1A-205ENST00000548650 FOXP2O15409 715 aa20.75■□□□□ 0.91
CHMP1A-205ENST00000548650 COPB2P35606 906 aa20.75■□□□□ 0.91
CHMP1A-205ENST00000548650 SENP6Q9GZR1 1112 aaPredicted RBP20.75■□□□□ 0.91
CHMP1A-205ENST00000548650 ZNF287Q9HBT7 754 aa20.75■□□□□ 0.91
CHMP1A-205ENST00000548650 DNAH12Q6ZR08 3092 aa20.74■□□□□ 0.91
CHMP1A-205ENST00000548650 PGK2P07205 417 aa20.74■□□□□ 0.91
CHMP1A-205ENST00000548650 KCTD2Q14681 263 aa20.74■□□□□ 0.91
CHMP1A-205ENST00000548650 ANO1Q5XXA6 986 aa20.74■□□□□ 0.91
CHMP1A-205ENST00000548650 LRRC47Q8N1G4 583 aaKnown RBP20.74■□□□□ 0.91
CHMP1A-205ENST00000548650 LRCH3Q96II8 777 aa20.74■□□□□ 0.91
CHMP1A-205ENST00000548650 TEX13BQ9BXU2 312 aa20.74■□□□□ 0.91
CHMP1A-205ENST00000548650 NACAP1Q9BZK3 213 aa20.74■□□□□ 0.91
CHMP1A-205ENST00000548650 MTMR4Q9NYA4 1195 aa20.74■□□□□ 0.91
CHMP1A-205ENST00000548650 CLIP2Q9UDT6 1046 aa20.74■□□□□ 0.91
CHMP1A-205ENST00000548650 SYNPO2Q9UMS6 1093 aa20.74■□□□□ 0.91
CHMP1A-205ENST00000548650 PPARAQ07869 468 aa20.73■□□□□ 0.91
CHMP1A-205ENST00000548650 ZNF792Q3KQV3 632 aa20.73■□□□□ 0.91
CHMP1A-205ENST00000548650 FAM47AQ5JRC9 791 aa20.73■□□□□ 0.91
CHMP1A-205ENST00000548650 PRAMEF19Q5SWL8 479 aa20.73■□□□□ 0.91
CHMP1A-205ENST00000548650 GJC2Q5T442 439 aaPredicted RBP20.73■□□□□ 0.91
CHMP1A-205ENST00000548650 ZNF444Q8N0Y2 327 aaPredicted RBP20.73■□□□□ 0.91
CHMP1A-205ENST00000548650 NAPBQ9H115 298 aa20.73■□□□□ 0.91
CHMP1A-205ENST00000548650 MCM3APO60318 1980 aa20.72■□□□□ 0.91
CHMP1A-205ENST00000548650 ATN1P54259 1190 aaPredicted RBP20.72■□□□□ 0.91
CHMP1A-205ENST00000548650 SNRNP48Q6IEG0 339 aaKnown RBP20.72■□□□□ 0.91
CHMP1A-205ENST00000548650 GMCL1P1Q8NEA9 526 aa20.72■□□□□ 0.91
CHMP1A-205ENST00000548650 NEDD1Q8NHV4 660 aa20.72■□□□□ 0.91
CHMP1A-205ENST00000548650 MKL1Q969V6 931 aa20.72■□□□□ 0.91
CHMP1A-205ENST00000548650 NRBP1Q9UHY1 535 aa20.72■□□□□ 0.91
CHMP1A-205ENST00000548650 DIS3Q9Y2L1 958 aaKnown RBP20.72■□□□□ 0.91
CHMP1A-205ENST00000548650 TTLL1O95922 423 aa20.71■□□□□ 0.91
CHMP1A-205ENST00000548650 PDE4BQ07343 736 aa20.71■□□□□ 0.91
CHMP1A-205ENST00000548650 HDAC1Q13547 482 aaPredicted RBP20.71■□□□□ 0.91
CHMP1A-205ENST00000548650 CCDC129Q6ZRS4 1044 aa20.71■□□□□ 0.91
CHMP1A-205ENST00000548650 TDHQ8IZJ6 230 aa20.71■□□□□ 0.91
CHMP1A-205ENST00000548650 ARRDC4Q8NCT1 418 aa20.71■□□□□ 0.91
CHMP1A-205ENST00000548650 TINF2Q9BSI4 451 aa20.71■□□□□ 0.91
CHMP1A-205ENST00000548650 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.71■□□□□ 0.91
CHMP1A-205ENST00000548650 RIPK3Q9Y572 518 aa20.71■□□□□ 0.91
CHMP1A-205ENST00000548650 KBTBD13C9JR72 458 aa20.7■□□□□ 0.9
CHMP1A-205ENST00000548650 ATP2A1O14983 1001 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms