RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 YEATS4O95619 227 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 YBX3P16989 372 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 TOB1P50616 345 aaPredicted RBP15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 ATP2B2Q01814 1243 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 ZNF543Q08ER8 600 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 RASA3Q14644 834 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 TYW1BQ6NUM6 668 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 GPKOWQ92917 476 aaPredicted RBP eCLIP15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 TNFRSF25Q93038 417 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 TEPSINQ96N21 525 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 UBA5Q9GZZ9 404 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 RIOX1Q9H6W3 641 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 ADAMTS3O15072 1205 aa15.69■□□□□ 0.1
SMPDL3B-205ENST00000548116 LIG1P18858 919 aa15.69■□□□□ 0.1
SMPDL3B-205ENST00000548116 DEKP35659 375 aaKnown RBP15.69■□□□□ 0.1
SMPDL3B-205ENST00000548116 KRT2P35908 639 aa15.69■□□□□ 0.1
SMPDL3B-205ENST00000548116 ZNF445P59923 1031 aa15.69■□□□□ 0.1
SMPDL3B-205ENST00000548116 ICA1Q05084 483 aa15.69■□□□□ 0.1
SMPDL3B-205ENST00000548116 KIF4BQ2VIQ3 1234 aa15.69■□□□□ 0.1
SMPDL3B-205ENST00000548116 WWC2Q6AWC2 1192 aa15.69■□□□□ 0.1
SMPDL3B-205ENST00000548116 GAS2L3Q86XJ1 694 aa15.69■□□□□ 0.1
SMPDL3B-205ENST00000548116 SH3GLB2Q9NR46 395 aa15.69■□□□□ 0.1
SMPDL3B-205ENST00000548116 FSD2A1L4K1 749 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 PTPAQ15257 358 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 EARS2Q5JPH6 523 aaKnown RBP15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 GPC2Q8N158 579 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 FAM205CA6NFA0 338 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 STXBP3O00186 592 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 TNNI2P48788 182 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 SLC39A14Q15043 492 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 STK38Q15208 465 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 SF3A1Q15459 793 aaKnown RBP15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 MIGA2Q7L4E1 593 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 GPCPD1Q9NPB8 672 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 GPRC5DQ9NZD1 345 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 HACL1Q9UJ83 578 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 PCDHA7Q9UN72 937 aa15.68■□□□□ 0.1
SMPDL3B-205ENST00000548116 GOLGA6L4A6NEF3 574 aa15.67■□□□□ 0.1
SMPDL3B-205ENST00000548116 SPTLC2O15270 562 aa15.67■□□□□ 0.1
SMPDL3B-205ENST00000548116 NLRP5P59047 1200 aa15.67■□□□□ 0.1
SMPDL3B-205ENST00000548116 NOM1Q5C9Z4 860 aaKnown RBP15.67■□□□□ 0.1
SMPDL3B-205ENST00000548116 TTBK2Q6IQ55 1244 aa15.67■□□□□ 0.1
SMPDL3B-205ENST00000548116 KCNG4Q8TDN1 519 aa15.67■□□□□ 0.1
SMPDL3B-205ENST00000548116 SYAP1Q96A49 352 aaPredicted RBP15.67■□□□□ 0.1
SMPDL3B-205ENST00000548116 PIGSQ96S52 555 aa15.67■□□□□ 0.1
SMPDL3B-205ENST00000548116 CABP5Q9NP86 173 aa15.67■□□□□ 0.1
SMPDL3B-205ENST00000548116 BARHL2Q9NY43 387 aa15.67■□□□□ 0.1
SMPDL3B-205ENST00000548116 SRCAPQ6ZRS2 3230 aa15.67■□□□□ 0.1
SMPDL3B-205ENST00000548116 A0A1W2PRG0 241 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 H7C1D1 291 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 TNFAIP1Q13829 316 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 GPATCH4Q5T3I0 446 aaKnown RBP15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 CCDC183Q5T5S1 534 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 TRPM4Q8TD43 1214 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 RRP36Q96EU6 259 aaKnown RBP15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 VAT1LQ9HCJ6 419 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 ZBTB21Q9ULJ3 1066 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 SYCE3A1L190 88 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 ME1P48163 572 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 RILPL1Q5EBL4 403 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 SLFN13Q68D06 897 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 KCTD1Q719H9 257 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 HEATR3Q7Z4Q2 680 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 GMCL1P1Q8NEA9 526 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 DCAF4Q8WV16 495 aa15.66■□□□□ 0.1
SMPDL3B-205ENST00000548116 PHF20L1A8MW92 1017 aa15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 M0R2N6 131 aa15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 CALML3P27482 149 aa15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 CCDC96Q2M329 555 aa15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 AXDND1Q5T1B0 1012 aaPredicted RBP15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 ADALQ6DHV7 355 aa15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 HOMER1Q86YM7 354 aa15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 ADGRF4Q8IZF3 695 aa15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 BICD2Q8TD16 824 aa15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 GOLPH3LQ9H4A5 285 aa15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 JMJD4Q9H9V9 463 aa15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 BRMS1Q9HCU9 246 aa15.65■□□□□ 0.1
SMPDL3B-205ENST00000548116 F5H6K3 240 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 NR1I2O75469 434 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 NDUFB10O96000 172 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 CAP2P40123 477 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 EPS15P42566 896 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 KLRC3Q07444 240 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 CCAR1Q8IX12 1150 aaKnown RBP15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 BLIDQ8IZY5 108 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 FAM177A1Q8N128 213 aaPredicted RBP15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 DAGLBQ8NCG7 672 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 MTMR8Q96EF0 704 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 DEFB129Q9H1M3 183 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 DACT1Q9NYF0 836 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 RNF181Q9P0P0 153 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 SYNPO2Q9UMS6 1093 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 PCDHA4Q9UN74 947 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 PCDHB6Q9Y5E3 794 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 A0A1W2PQ27 194 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 A0A1W2PQ64 194 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 A0A1W2PQD8 194 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 PPP6R2O75170 966 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 SLC16A2P36021 539 aa15.64■□□□□ 0.09
SMPDL3B-205ENST00000548116 SLC1A4P43007 532 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms