RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 CCDC9Q9Y3X0 531 aaKnown RBP0.57□□□□□ -2.32
CEP290-203ENST00000547691 TCAF1Q9Y4C2 921 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 LOXHD1Q8IVV2 1947 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 TNKSO95271 1327 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 KIAA1549LQ6ZVL6 1849 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 CACNA1FO60840 1977 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 DXOO77932 396 aaKnown RBP0.57□□□□□ -2.32
CEP290-203ENST00000547691 CYP7A1P22680 504 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 PTGIRP43119 386 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 GJA8P48165 433 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 ZNF280AP59817 542 aaPredicted RBP0.57□□□□□ -2.32
CEP290-203ENST00000547691 C1orf53Q5VUE5 145 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 CC2D2BQ6DHV5 1058 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 CYP4F22Q6NT55 531 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 BICDL1Q6ZP65 573 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 ZSWIM9Q86XI8 627 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 ZNF296Q8WUU4 475 aaPredicted RBP0.57□□□□□ -2.32
CEP290-203ENST00000547691 ARHGEF1Q92888 912 aaKnown RBP0.57□□□□□ -2.32
CEP290-203ENST00000547691 PNMA5Q96PV4 448 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 DIRC2Q96SL1 478 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 RBSNQ9H1K0 784 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 POLR3EQ9NVU0 708 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 DLG5Q8TDM6 1919 aa0.57□□□□□ -2.32
CEP290-203ENST00000547691 GRIN2DO15399 1336 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 RNF123Q5XPI4 1314 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 RNF213Q63HN8 5207 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 HEG1Q9ULI3 1381 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 FKTNO75072 461 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 RHOBTB3O94955 611 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 SRGNP10124 158 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 C6P13671 934 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 PHKA2P46019 1235 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 DGKGP49619 791 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 EVA1CP58658 441 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 CAP1Q01518 475 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 NHLH1Q02575 133 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 KCNH2Q12809 1159 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 NBPF1Q3BBV0 1214 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 LDLRAD1Q5T700 205 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 OTOP1Q7RTM1 612 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 ATG4DQ86TL0 474 aaPredicted RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 RTKN2Q8IZC4 609 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 ZDHHC14Q8IZN3 488 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 TTLL6Q8N841 843 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 SHKBP1Q8TBC3 707 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 DDX54Q8TDD1 881 aaKnown RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 ZNF526Q8TF50 670 aaPredicted RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 DPF2Q92785 391 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 ABHD17AQ96GS6 310 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 ASB2Q96Q27 587 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 LRFN3Q9BTN0 628 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 NSUN3Q9H649 340 aaKnown RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 PAK6Q9NQU5 681 aaPredicted RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 GPRC5DQ9NZD1 345 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 NARFQ9UHQ1 456 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 GPC6Q9Y625 555 aaPredicted RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 FLT4P35916 1363 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 CDK5RAP2Q96SN8 1893 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 LOC102724428A0A0B4J2F2 783 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 ATXN7O15265 892 aaPredicted RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 ZBTB48P10074 688 aaPredicted RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 RPS12P25398 132 aaKnown RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 HOXC9P31274 260 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 MRE11P49959 708 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 EIF5P55010 431 aaKnown RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 SIK1P57059 783 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 KIF23Q02241 960 aaPredicted RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 SNX17Q15036 470 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 NFKBIBQ15653 356 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 UVSSAQ2YD98 709 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 PPP1R26Q5T8A7 1209 aaPredicted RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 RNF20Q5VTR2 975 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 RNF43Q68DV7 783 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 TOM1L2Q6ZVM7 507 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 SKAP1Q86WV1 359 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 TDHQ8IZJ6 230 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 ZCRB1Q8TBF4 217 aaKnown RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 ANKRD24Q8TF21 1146 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 PIGBQ92521 554 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 ERO1AQ96HE7 468 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 LOXL4Q96JB6 756 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 PRRX2Q99811 253 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 HIRIP3Q9BW71 556 aaPredicted RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 CDK19Q9BWU1 502 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 TAOK3Q9H2K8 898 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 STRN4Q9NRL3 753 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 HIF3AQ9Y2N7 669 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 HCN4Q9Y3Q4 1203 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 HS3ST3A1Q9Y663 406 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 PARP3Q9Y6F1 533 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 POLR2AP24928 1970 aaKnown RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 A0A0A0MRY4 1105 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 CYP27B1O15528 508 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 C1QTNF9P0C862 333 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 GPC1P35052 558 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 IARSP41252 1262 aaKnown RBP0.56□□□□□ -2.32
CEP290-203ENST00000547691 LCNL1Q6ZST4 164 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP0.56□□□□□ -2.32
CEP290-203ENST00000547691 TRIM11Q96F44 468 aa0.56□□□□□ -2.32
CEP290-203ENST00000547691 AK7Q96M32 723 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms