RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 SLC25A27O95847 323 aa16.67■□□□□ 0.26
SEMA4D-224ENST00000544513 FCER1AP12319 257 aa16.67■□□□□ 0.26
SEMA4D-224ENST00000544513 PLS1Q14651 629 aa16.67■□□□□ 0.26
SEMA4D-224ENST00000544513 SBK1Q52WX2 424 aa16.67■□□□□ 0.26
SEMA4D-224ENST00000544513 GIMAP6Q6P9H5 292 aa16.67■□□□□ 0.26
SEMA4D-224ENST00000544513 NCAPG2Q86XI2 1143 aa16.67■□□□□ 0.26
SEMA4D-224ENST00000544513 MAML3Q96JK9 1138 aa16.67■□□□□ 0.26
SEMA4D-224ENST00000544513 FBXO28Q9NVF7 368 aa16.67■□□□□ 0.26
SEMA4D-224ENST00000544513 ARPP21Q9UBL0 812 aaPredicted RBP16.67■□□□□ 0.26
SEMA4D-224ENST00000544513 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 GSG1L2A8MUP6 293 aa16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 VWA5AO00534 786 aa16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 ATN1P54259 1190 aaPredicted RBP16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 MDM2Q00987 491 aaPredicted RBP16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 GJC2Q5T442 439 aaPredicted RBP16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 RIOX2Q8IUF8 465 aa16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 DEFB123Q8N688 67 aa16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 REPS2Q8NFH8 660 aa16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 GOPCQ9HD26 462 aa16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 NRBP1Q9UHY1 535 aa16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 PPP1R9AQ9ULJ8 1098 aa16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 ZNFX1Q9P2E3 1918 aaKnown RBP16.66■□□□□ 0.26
SEMA4D-224ENST00000544513 ROBO3Q96MS0 1386 aa16.65■□□□□ 0.26
SEMA4D-224ENST00000544513 RASA1P20936 1047 aa16.65■□□□□ 0.26
SEMA4D-224ENST00000544513 RTP1P59025 263 aa16.65■□□□□ 0.26
SEMA4D-224ENST00000544513 SNX17Q15036 470 aa16.65■□□□□ 0.26
SEMA4D-224ENST00000544513 PRAMEF19Q5SWL8 479 aa16.65■□□□□ 0.26
SEMA4D-224ENST00000544513 Q7L0L9 218 aa16.65■□□□□ 0.26
SEMA4D-224ENST00000544513 KBTBD3Q8NAB2 608 aa16.65■□□□□ 0.26
SEMA4D-224ENST00000544513 DCTPP1Q9H773 170 aa16.65■□□□□ 0.26
SEMA4D-224ENST00000544513 ZNF214Q9UL59 606 aaPredicted RBP16.65■□□□□ 0.26
SEMA4D-224ENST00000544513 COL11A1P12107 1806 aaPredicted RBP16.65■□□□□ 0.26
SEMA4D-224ENST00000544513 SMCHD1A6NHR9 2005 aa16.64■□□□□ 0.25
SEMA4D-224ENST00000544513 STAT3P40763 770 aa16.64■□□□□ 0.25
SEMA4D-224ENST00000544513 C1orf53Q5VUE5 145 aa16.64■□□□□ 0.25
SEMA4D-224ENST00000544513 SLC39A5Q6ZMH5 540 aa16.64■□□□□ 0.25
SEMA4D-224ENST00000544513 OSBP2Q969R2 916 aa16.64■□□□□ 0.25
SEMA4D-224ENST00000544513 MTMR10Q9NXD2 777 aa16.64■□□□□ 0.25
SEMA4D-224ENST00000544513 DIS3Q9Y2L1 958 aaKnown RBP16.64■□□□□ 0.25
SEMA4D-224ENST00000544513 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 KBTBD13C9JR72 458 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 PGK2P07205 417 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 COPB2P35606 906 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 LRRC41Q15345 812 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 ZNF792Q3KQV3 632 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 FAM83BQ5T0W9 1011 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 ANO1Q5XXA6 986 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 SLC17A8Q8NDX2 589 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 MMP19Q99542 508 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 LBHD1Q9BQE6 289 aaPredicted RBP16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 TINF2Q9BSI4 451 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 NYAP2Q9P242 653 aa16.63■□□□□ 0.25
SEMA4D-224ENST00000544513 POTEB2H3BUK9 544 aa16.62■□□□□ 0.25
SEMA4D-224ENST00000544513 RNF113AO15541 343 aaKnown RBP16.62■□□□□ 0.25
SEMA4D-224ENST00000544513 FAM109BQ6ICB4 259 aaPredicted RBP16.62■□□□□ 0.25
SEMA4D-224ENST00000544513 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
SEMA4D-224ENST00000544513 APPBP2Q92624 585 aa16.62■□□□□ 0.25
SEMA4D-224ENST00000544513 EPB41L4AQ9HCS5 686 aaPredicted RBP16.62■□□□□ 0.25
SEMA4D-224ENST00000544513 STXBP5LQ9Y2K9 1186 aa16.62■□□□□ 0.25
SEMA4D-224ENST00000544513 LTBP2Q14767 1821 aa16.61■□□□□ 0.25
SEMA4D-224ENST00000544513 CDH23Q9H251 3354 aa16.61■□□□□ 0.25
SEMA4D-224ENST00000544513 ZFYP08048 801 aaPredicted RBP16.61■□□□□ 0.25
SEMA4D-224ENST00000544513 ADCYAP1R1P41586 468 aa16.61■□□□□ 0.25
SEMA4D-224ENST00000544513 KCTD2Q14681 263 aa16.61■□□□□ 0.25
SEMA4D-224ENST00000544513 FAM47AQ5JRC9 791 aa16.61■□□□□ 0.25
SEMA4D-224ENST00000544513 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
SEMA4D-224ENST00000544513 NUP88Q99567 741 aaPredicted RBP16.61■□□□□ 0.25
SEMA4D-224ENST00000544513 SLF1Q9BQI6 1058 aa16.61■□□□□ 0.25
SEMA4D-224ENST00000544513 PHF24Q9UPV7 400 aa16.61■□□□□ 0.25
SEMA4D-224ENST00000544513 ATP11BQ9Y2G3 1177 aa16.61■□□□□ 0.25
SEMA4D-224ENST00000544513 EYSQ5T1H1 3165 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 F5H6K3 240 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 ATP2A1O14983 1001 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 GPAA1O43292 621 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 NDUFB10O96000 172 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 ZNF865P0CJ78 1059 aaPredicted RBP16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 TAL1P17542 331 aaPredicted RBP16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 KLRC3Q07444 240 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 TRIM60Q495X7 471 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 MKL1Q969V6 931 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 GPATCH3Q96I76 525 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 TEX13BQ9BXU2 312 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 MKNK2Q9HBH9 465 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 PRKAG2Q9UGJ0 569 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 PLXNA1Q9UIW2 1896 aa16.6■□□□□ 0.25
SEMA4D-224ENST00000544513 DNAJC25-GNG10A0A024R161 153 aa16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 MINDY4BA8MYZ0 360 aa16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 M0R2C6 588 aa16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 RARBP10826 455 aa16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 GNAT2P19087 354 aa16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 MSL3Q8N5Y2 521 aaKnown RBP16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 PRPF38AQ8NAV1 312 aaKnown RBP16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 XPNPEP3Q9NQH7 507 aa16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 PDLIM7Q9NR12 457 aa16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 SYNPO2Q9UMS6 1093 aa16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 RIPK3Q9Y572 518 aa16.59■□□□□ 0.25
SEMA4D-224ENST00000544513 VCANP13611 3396 aa16.58■□□□□ 0.24
SEMA4D-224ENST00000544513 PATL2C9JE40 543 aaKnown RBP16.58■□□□□ 0.24
SEMA4D-224ENST00000544513 RAD21O60216 631 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms