RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 A0A0C4DFX4 3053 aa27.21■■□□□ 1.95
CDKN3-207ENST00000543789 CHGBP05060 677 aa27.2■■□□□ 1.94
CDKN3-207ENST00000543789 ADCYAP1R1P41586 468 aa27.19■■□□□ 1.94
CDKN3-207ENST00000543789 SNX17Q15036 470 aa27.19■■□□□ 1.94
CDKN3-207ENST00000543789 LRRC41Q15345 812 aa27.19■■□□□ 1.94
CDKN3-207ENST00000543789 ZSCAN25Q6NSZ9 544 aa27.19■■□□□ 1.94
CDKN3-207ENST00000543789 CTR9Q6PD62 1173 aa27.19■■□□□ 1.94
CDKN3-207ENST00000543789 RIOX2Q8IUF8 465 aa27.19■■□□□ 1.94
CDKN3-207ENST00000543789 MMP19Q99542 508 aa27.19■■□□□ 1.94
CDKN3-207ENST00000543789 GOPCQ9HD26 462 aa27.19■■□□□ 1.94
CDKN3-207ENST00000543789 PRDM5Q9NQX1 630 aaPredicted RBP27.19■■□□□ 1.94
CDKN3-207ENST00000543789 FBXO28Q9NVF7 368 aa27.19■■□□□ 1.94
CDKN3-207ENST00000543789 NRBP1Q9UHY1 535 aa27.19■■□□□ 1.94
CDKN3-207ENST00000543789 NAV1Q8NEY1 1877 aa27.19■■□□□ 1.94
CDKN3-207ENST00000543789 STAT3P40763 770 aa27.18■■□□□ 1.94
CDKN3-207ENST00000543789 TRIM60Q495X7 471 aa27.18■■□□□ 1.94
CDKN3-207ENST00000543789 DNAH12Q6ZR08 3092 aa27.18■■□□□ 1.94
CDKN3-207ENST00000543789 FAM47AQ5JRC9 791 aa27.17■■□□□ 1.94
CDKN3-207ENST00000543789 FERMT2Q96AC1 680 aa27.17■■□□□ 1.94
CDKN3-207ENST00000543789 PUS7LQ9H0K6 701 aaKnown RBP27.17■■□□□ 1.94
CDKN3-207ENST00000543789 DIS3Q9Y2L1 958 aaKnown RBP27.17■■□□□ 1.94
CDKN3-207ENST00000543789 VWA5AO00534 786 aa27.16■■□□□ 1.94
CDKN3-207ENST00000543789 RAD21O60216 631 aa27.16■■□□□ 1.94
CDKN3-207ENST00000543789 PGK2P07205 417 aa27.16■■□□□ 1.94
CDKN3-207ENST00000543789 KCTD2Q14681 263 aa27.16■■□□□ 1.94
CDKN3-207ENST00000543789 C1orf53Q5VUE5 145 aa27.16■■□□□ 1.94
CDKN3-207ENST00000543789 PPP1R9AQ9ULJ8 1098 aa27.16■■□□□ 1.94
CDKN3-207ENST00000543789 RARBP10826 455 aa27.15■■□□□ 1.94
CDKN3-207ENST00000543789 SHHQ15465 462 aa27.15■■□□□ 1.94
CDKN3-207ENST00000543789 BADQ92934 168 aa27.15■■□□□ 1.94
CDKN3-207ENST00000543789 GUCD1Q96NT3 240 aa27.15■■□□□ 1.94
CDKN3-207ENST00000543789 TINF2Q9BSI4 451 aa27.15■■□□□ 1.94
CDKN3-207ENST00000543789 LRRCC1Q9C099 1032 aa27.15■■□□□ 1.94
CDKN3-207ENST00000543789 XPNPEP3Q9NQH7 507 aa27.15■■□□□ 1.94
CDKN3-207ENST00000543789 ZNF236Q9UL36 1845 aa27.15■■□□□ 1.94
CDKN3-207ENST00000543789 COPB2P35606 906 aa27.14■■□□□ 1.94
CDKN3-207ENST00000543789 ZNF792Q3KQV3 632 aa27.14■■□□□ 1.94
CDKN3-207ENST00000543789 FAM83BQ5T0W9 1011 aa27.14■■□□□ 1.94
CDKN3-207ENST00000543789 DIEXFQ68CQ4 756 aaKnown RBP27.14■■□□□ 1.94
CDKN3-207ENST00000543789 FAM161BQ96MY7 647 aa27.14■■□□□ 1.94
CDKN3-207ENST00000543789 ARPP21Q9UBL0 812 aaPredicted RBP27.14■■□□□ 1.94
CDKN3-207ENST00000543789 PHF24Q9UPV7 400 aa27.14■■□□□ 1.94
CDKN3-207ENST00000543789 ZNF697Q5TEC3 545 aa27.13■■□□□ 1.93
CDKN3-207ENST00000543789 RNF180Q86T96 592 aa27.13■■□□□ 1.93
CDKN3-207ENST00000543789 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.13■■□□□ 1.93
CDKN3-207ENST00000543789 PDLIM7Q9NR12 457 aa27.13■■□□□ 1.93
CDKN3-207ENST00000543789 ZNF214Q9UL59 606 aaPredicted RBP27.13■■□□□ 1.93
CDKN3-207ENST00000543789 RLFQ13129 1914 aa27.12■■□□□ 1.93
CDKN3-207ENST00000543789 FRMPD3Q5JV73 1810 aa27.12■■□□□ 1.93
CDKN3-207ENST00000543789 TRIM43BA6NCK2 446 aa27.12■■□□□ 1.93
CDKN3-207ENST00000543789 TLE2Q04725 743 aa27.12■■□□□ 1.93
CDKN3-207ENST00000543789 C9orf50Q5SZB4 431 aa27.12■■□□□ 1.93
CDKN3-207ENST00000543789 SH3RF1Q7Z6J0 888 aa27.12■■□□□ 1.93
CDKN3-207ENST00000543789 REPS2Q8NFH8 660 aa27.12■■□□□ 1.93
CDKN3-207ENST00000543789 TRIM43Q96BQ3 446 aaPredicted RBP27.12■■□□□ 1.93
CDKN3-207ENST00000543789 STRBPQ96SI9 672 aaKnown RBP27.12■■□□□ 1.93
CDKN3-207ENST00000543789 A0A0G2JMZ2 1700 aa27.11■■□□□ 1.93
CDKN3-207ENST00000543789 SMARCA5O60264 1052 aaPredicted RBP27.11■■□□□ 1.93
CDKN3-207ENST00000543789 PGK1P00558 417 aa27.11■■□□□ 1.93
CDKN3-207ENST00000543789 TAL1P17542 331 aaPredicted RBP27.11■■□□□ 1.93
CDKN3-207ENST00000543789 SBK1Q52WX2 424 aa27.11■■□□□ 1.93
CDKN3-207ENST00000543789 TACC3Q9Y6A5 838 aa27.11■■□□□ 1.93
CDKN3-207ENST00000543789 ZNF865P0CJ78 1059 aaPredicted RBP27.1■■□□□ 1.93
CDKN3-207ENST00000543789 SLF1Q9BQI6 1058 aa27.1■■□□□ 1.93
CDKN3-207ENST00000543789 MKNK2Q9HBH9 465 aa27.1■■□□□ 1.93
CDKN3-207ENST00000543789 AKR1A1P14550 325 aa27.09■■□□□ 1.93
CDKN3-207ENST00000543789 GIMAP6Q6P9H5 292 aa27.09■■□□□ 1.93
CDKN3-207ENST00000543789 ECHDC1Q9NTX5 307 aa27.09■■□□□ 1.93
CDKN3-207ENST00000543789 NYAP2Q9P242 653 aa27.09■■□□□ 1.93
CDKN3-207ENST00000543789 CNPY2Q9Y2B0 182 aa27.09■■□□□ 1.93
CDKN3-207ENST00000543789 GSG1L2A8MUP6 293 aa27.08■■□□□ 1.93
CDKN3-207ENST00000543789 F5H6K3 240 aa27.08■■□□□ 1.93
CDKN3-207ENST00000543789 RASA1P20936 1047 aa27.08■■□□□ 1.93
CDKN3-207ENST00000543789 KLRC3Q07444 240 aa27.08■■□□□ 1.93
CDKN3-207ENST00000543789 STK11IPQ8N1F8 1099 aa27.08■■□□□ 1.93
CDKN3-207ENST00000543789 MSL3Q8N5Y2 521 aaKnown RBP27.08■■□□□ 1.93
CDKN3-207ENST00000543789 NUP88Q99567 741 aaPredicted RBP27.08■■□□□ 1.93
CDKN3-207ENST00000543789 TEX13BQ9BXU2 312 aa27.08■■□□□ 1.93
CDKN3-207ENST00000543789 RCAN3Q9UKA8 241 aa27.08■■□□□ 1.93
CDKN3-207ENST00000543789 MINDY4BA8MYZ0 360 aa27.07■■□□□ 1.92
CDKN3-207ENST00000543789 CLTBP09497 229 aa27.07■■□□□ 1.92
CDKN3-207ENST00000543789 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.07■■□□□ 1.92
CDKN3-207ENST00000543789 SEMA6BQ9H3T3 888 aa27.07■■□□□ 1.92
CDKN3-207ENST00000543789 SMAD3P84022 425 aaKnown RBP27.06■■□□□ 1.92
CDKN3-207ENST00000543789 SNRNP48Q6IEG0 339 aaKnown RBP27.06■■□□□ 1.92
CDKN3-207ENST00000543789 KBTBD3Q8NAB2 608 aa27.06■■□□□ 1.92
CDKN3-207ENST00000543789 PRPF38AQ8NAV1 312 aaKnown RBP27.06■■□□□ 1.92
CDKN3-207ENST00000543789 DDX11Q96FC9 970 aa27.06■■□□□ 1.92
CDKN3-207ENST00000543789 CDX2Q99626 313 aaPredicted RBP27.06■■□□□ 1.92
CDKN3-207ENST00000543789 A0A1W2PQ45 241 aaPredicted RBP27.05■■□□□ 1.92
CDKN3-207ENST00000543789 A0A1W2PQY0 241 aa27.05■■□□□ 1.92
CDKN3-207ENST00000543789 NDUFB10O96000 172 aa27.05■■□□□ 1.92
CDKN3-207ENST00000543789 ITGB8P26012 769 aa27.05■■□□□ 1.92
CDKN3-207ENST00000543789 OSBP2Q969R2 916 aa27.05■■□□□ 1.92
CDKN3-207ENST00000543789 TSEN34Q9BSV6 310 aaKnown RBP27.05■■□□□ 1.92
CDKN3-207ENST00000543789 CLIP2Q9UDT6 1046 aa27.05■■□□□ 1.92
CDKN3-207ENST00000543789 RIPK3Q9Y572 518 aa27.05■■□□□ 1.92
CDKN3-207ENST00000543789 ROBO3Q96MS0 1386 aa27.05■■□□□ 1.92
CDKN3-207ENST00000543789 LAMA2P24043 3122 aaKnown RBP27.04■■□□□ 1.92
CDKN3-207ENST00000543789 PQBP1O60828 265 aaKnown RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms