RNA–Protein interactions for RNA: ENST00000539154.1

MEFV-208, Transcript of MEFV, pyrin innate immunity regulator, humanhuman

TSL 5

Gene MEFV, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEFV-208ENST00000539154 LRRCC1Q9C099 1032 aa11.21□□□□□ -0.61
MEFV-208ENST00000539154 SWAP70Q9UH65 585 aa11.21□□□□□ -0.61
MEFV-208ENST00000539154 LAMA3Q16787 3333 aa11.2□□□□□ -0.62
MEFV-208ENST00000539154 ZNFX1Q9P2E3 1918 aaKnown RBP11.2□□□□□ -0.62
MEFV-208ENST00000539154 A0A1W2PPC1 479 aa11.2□□□□□ -0.62
MEFV-208ENST00000539154 MINDY4BA8MYZ0 360 aa11.2□□□□□ -0.62
MEFV-208ENST00000539154 BMP8BP34820 402 aa11.2□□□□□ -0.62
MEFV-208ENST00000539154 C16orf86Q6ZW13 317 aa11.2□□□□□ -0.62
MEFV-208ENST00000539154 LPAR1Q92633 364 aa11.2□□□□□ -0.62
MEFV-208ENST00000539154 ATP8A2Q9NTI2 1148 aa11.2□□□□□ -0.62
MEFV-208ENST00000539154 HOXC10Q9NYD6 342 aa11.2□□□□□ -0.62
MEFV-208ENST00000539154 ZNF236Q9UL36 1845 aa11.2□□□□□ -0.62
MEFV-208ENST00000539154 PLXNA1Q9UIW2 1896 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 LTBP2Q14767 1821 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 KBTBD13C9JR72 458 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 M0R2C6 588 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 WDR46O15213 610 aaKnown RBP11.19□□□□□ -0.62
MEFV-208ENST00000539154 PRDM1O75626 825 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 HOXC6P09630 235 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 TAL1P17542 331 aaPredicted RBP11.19□□□□□ -0.62
MEFV-208ENST00000539154 CAPN2P17655 700 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 ADCYAP1R1P41586 468 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 TRIM60Q495X7 471 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 FAM47AQ5JRC9 791 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 DDRGK1Q96HY6 314 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 MMP19Q99542 508 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 LBHD1Q9BQE6 289 aaPredicted RBP11.19□□□□□ -0.62
MEFV-208ENST00000539154 ISY1Q9ULR0 285 aaKnown RBP11.19□□□□□ -0.62
MEFV-208ENST00000539154 TMX2Q9Y320 296 aa11.19□□□□□ -0.62
MEFV-208ENST00000539154 DNM1LO00429 736 aa11.18□□□□□ -0.62
MEFV-208ENST00000539154 APPP05067 770 aa11.18□□□□□ -0.62
MEFV-208ENST00000539154 UBE3CQ15386 1083 aa11.18□□□□□ -0.62
MEFV-208ENST00000539154 TMED8Q6PL24 325 aaPredicted RBP11.18□□□□□ -0.62
MEFV-208ENST00000539154 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
MEFV-208ENST00000539154 OSBP2Q969R2 916 aa11.18□□□□□ -0.62
MEFV-208ENST00000539154 MAML3Q96JK9 1138 aa11.18□□□□□ -0.62
MEFV-208ENST00000539154 SEC62Q99442 399 aaKnown RBP11.18□□□□□ -0.62
MEFV-208ENST00000539154 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.18□□□□□ -0.62
MEFV-208ENST00000539154 SH2D4AQ9H788 454 aa11.18□□□□□ -0.62
MEFV-208ENST00000539154 GOPCQ9HD26 462 aa11.18□□□□□ -0.62
MEFV-208ENST00000539154 ECHDC1Q9NTX5 307 aa11.18□□□□□ -0.62
MEFV-208ENST00000539154 COL6A3P12111 3177 aa11.18□□□□□ -0.62
MEFV-208ENST00000539154 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 DLL1O00548 723 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 PGK1P00558 417 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 FCER1AP12319 257 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 RASA1P20936 1047 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 TDO2P48775 406 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 LRRC41Q15345 812 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 OLFML2BQ68BL8 750 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 SLC39A5Q6ZMH5 540 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 CPXCR1Q8N123 301 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 LRRC47Q8N1G4 583 aaKnown RBP11.17□□□□□ -0.62
MEFV-208ENST00000539154 SHCBP1Q8NEM2 672 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 OTUD7AQ8TE49 926 aaPredicted RBP11.17□□□□□ -0.62
MEFV-208ENST00000539154 CCDC17Q96LX7 622 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 STRBPQ96SI9 672 aaKnown RBP11.17□□□□□ -0.62
MEFV-208ENST00000539154 MROH8Q9H579 483 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 MKNK2Q9HBH9 465 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 EPB41L4AQ9HCS5 686 aaPredicted RBP11.17□□□□□ -0.62
MEFV-208ENST00000539154 PRKAG2Q9UGJ0 569 aa11.17□□□□□ -0.62
MEFV-208ENST00000539154 GREB1LQ9C091 1923 aaPredicted RBP11.16□□□□□ -0.62
MEFV-208ENST00000539154 GSG1L2A8MUP6 293 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 HAX1O00165 279 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 VWA5AO00534 786 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 SEPT4O43236 478 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 STRNO43815 780 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 MSCO60682 206 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 STAT3P40763 770 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
MEFV-208ENST00000539154 PLCB2Q00722 1185 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 C9orf50Q5SZB4 431 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 SNRNP48Q6IEG0 339 aaKnown RBP11.16□□□□□ -0.62
MEFV-208ENST00000539154 ZSCAN25Q6NSZ9 544 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 MB21D1Q8N884 522 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 ARRDC4Q8NCT1 418 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 BADQ92934 168 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 KIFC2Q96AC6 838 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 KANSL2Q9H9L4 492 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 MTMR10Q9NXD2 777 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 ARPP21Q9UBL0 812 aaPredicted RBP11.16□□□□□ -0.62
MEFV-208ENST00000539154 CLIP2Q9UDT6 1046 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 PPP1R9AQ9ULJ8 1098 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 MTMR7Q9Y216 660 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 RIPK3Q9Y572 518 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 SMCHD1A6NHR9 2005 aa11.16□□□□□ -0.62
MEFV-208ENST00000539154 TRIM43BA6NCK2 446 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 RNF113AO15541 343 aaKnown RBP11.15□□□□□ -0.62
MEFV-208ENST00000539154 GPAA1O43292 621 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 NDUFB10O96000 172 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 IGHA2P01877 340 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 SNAP25P60880 206 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 KCTD2Q14681 263 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 SHHQ15465 462 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 LRIT3Q3SXY7 679 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 CCDC129Q6ZRS4 1044 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 RASGRP2Q7LDG7 609 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 RIOX2Q8IUF8 465 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 REPS2Q8NFH8 660 aa11.15□□□□□ -0.62
MEFV-208ENST00000539154 TRIM43Q96BQ3 446 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms