RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 SLC25A27O95847 323 aa11.59□□□□□ -0.55
CHD4-207ENST00000537634 FCER1AP12319 257 aa11.59□□□□□ -0.55
CHD4-207ENST00000537634 MAGEA10P43363 369 aaPredicted RBP11.59□□□□□ -0.55
CHD4-207ENST00000537634 TDO2P48775 406 aa11.59□□□□□ -0.55
CHD4-207ENST00000537634 SBK1Q52WX2 424 aa11.59□□□□□ -0.55
CHD4-207ENST00000537634 STK11IPQ8N1F8 1099 aa11.59□□□□□ -0.55
CHD4-207ENST00000537634 TRPV1Q8NER1 839 aa11.59□□□□□ -0.55
CHD4-207ENST00000537634 OSBP2Q969R2 916 aa11.59□□□□□ -0.55
CHD4-207ENST00000537634 SENP6Q9GZR1 1112 aaPredicted RBP11.59□□□□□ -0.55
CHD4-207ENST00000537634 SOX1O00570 391 aaPredicted RBP11.58□□□□□ -0.56
CHD4-207ENST00000537634 GPAA1O43292 621 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 COBLO75128 1261 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 IGHA2P01877 340 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 APPP05067 770 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 GNAT2P19087 354 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 RASA1P20936 1047 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 TMEM132BQ14DG7 1078 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 FAM83BQ5T0W9 1011 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 MMP19Q99542 508 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 UBE2OQ9C0C9 1292 aaKnown RBP11.58□□□□□ -0.56
CHD4-207ENST00000537634 ZNF287Q9HBT7 754 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 FBXO28Q9NVF7 368 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 PPP1R9AQ9ULJ8 1098 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 ZNFX1Q9P2E3 1918 aaKnown RBP11.58□□□□□ -0.56
CHD4-207ENST00000537634 MYH4Q9Y623 1939 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 TTC41PQ6P2S7 1318 aa11.58□□□□□ -0.56
CHD4-207ENST00000537634 PLXNA1Q9UIW2 1896 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 KBTBD13C9JR72 458 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 M0R2C6 588 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 VWA5AO00534 786 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 ERC2O15083 957 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 SEPT4O43236 478 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 COPB2P35606 906 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 KCTD2Q14681 263 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 RIOX2Q8IUF8 465 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 TDHQ8IZJ6 230 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 ARRDC4Q8NCT1 418 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 LRCH3Q96II8 777 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 MAML3Q96JK9 1138 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 SLF1Q9BQI6 1058 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD4-207ENST00000537634 NYAP2Q9P242 653 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 ADAMTS5Q9UNA0 930 aa11.57□□□□□ -0.56
CHD4-207ENST00000537634 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
CHD4-207ENST00000537634 STAT3P40763 770 aa11.56□□□□□ -0.56
CHD4-207ENST00000537634 ATN1P54259 1190 aaPredicted RBP11.56□□□□□ -0.56
CHD4-207ENST00000537634 GJC2Q5T442 439 aaPredicted RBP11.56□□□□□ -0.56
CHD4-207ENST00000537634 ANO1Q5XXA6 986 aa11.56□□□□□ -0.56
CHD4-207ENST00000537634 ZNF444Q8N0Y2 327 aaPredicted RBP11.56□□□□□ -0.56
CHD4-207ENST00000537634 NUP88Q99567 741 aaPredicted RBP11.56□□□□□ -0.56
CHD4-207ENST00000537634 FSD1Q9BTV5 496 aa11.56□□□□□ -0.56
CHD4-207ENST00000537634 NACAP1Q9BZK3 213 aa11.56□□□□□ -0.56
CHD4-207ENST00000537634 EPB41L4AQ9HCS5 686 aaPredicted RBP11.56□□□□□ -0.56
CHD4-207ENST00000537634 ZNF214Q9UL59 606 aaPredicted RBP11.56□□□□□ -0.56
CHD4-207ENST00000537634 RANBP2P49792 3224 aaKnown RBP11.55□□□□□ -0.56
CHD4-207ENST00000537634 F5H6K3 240 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 PRDM1O75626 825 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 NDUFB10O96000 172 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 PGK2P07205 417 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 RTP1P59025 263 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 MDM2Q00987 491 aaPredicted RBP11.55□□□□□ -0.56
CHD4-207ENST00000537634 KLRC3Q07444 240 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 LRIT3Q3SXY7 679 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 PRAMEF19Q5SWL8 479 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 PI4K2BQ8TCG2 481 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 LBHD1Q9BQE6 289 aaPredicted RBP11.55□□□□□ -0.56
CHD4-207ENST00000537634 TEX13BQ9BXU2 312 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 CLIP2Q9UDT6 1046 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
CHD4-207ENST00000537634 PRKAG2Q9UGJ0 569 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 NRBP1Q9UHY1 535 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 CTDP1Q9Y5B0 961 aaPredicted RBP11.55□□□□□ -0.56
CHD4-207ENST00000537634 PCDHB15Q9Y5E8 787 aa11.55□□□□□ -0.56
CHD4-207ENST00000537634 PATL2C9JE40 543 aaKnown RBP11.54□□□□□ -0.56
CHD4-207ENST00000537634 SLC3A2P08195 630 aaKnown RBP11.54□□□□□ -0.56
CHD4-207ENST00000537634 MX1P20591 662 aa11.54□□□□□ -0.56
CHD4-207ENST00000537634 PDE4BQ07343 736 aa11.54□□□□□ -0.56
CHD4-207ENST00000537634 FAM47AQ5JRC9 791 aa11.54□□□□□ -0.56
CHD4-207ENST00000537634 SNRNP48Q6IEG0 339 aaKnown RBP11.54□□□□□ -0.56
CHD4-207ENST00000537634 GPR153Q6NV75 609 aa11.54□□□□□ -0.56
CHD4-207ENST00000537634 IFNL3Q8IZI9 196 aa11.54□□□□□ -0.56
CHD4-207ENST00000537634 PRPF38AQ8NAV1 312 aaKnown RBP11.54□□□□□ -0.56
CHD4-207ENST00000537634 REPS2Q8NFH8 660 aa11.54□□□□□ -0.56
CHD4-207ENST00000537634 OTUD7AQ8TE49 926 aaPredicted RBP11.54□□□□□ -0.56
CHD4-207ENST00000537634 CEP95Q96GE4 821 aa11.54□□□□□ -0.56
CHD4-207ENST00000537634 TINF2Q9BSI4 451 aa11.54□□□□□ -0.56
CHD4-207ENST00000537634 NAPBQ9H115 298 aa11.54□□□□□ -0.56
CHD4-207ENST00000537634 ATP11BQ9Y2G3 1177 aa11.54□□□□□ -0.56
CHD4-207ENST00000537634 DIS3Q9Y2L1 958 aaKnown RBP11.54□□□□□ -0.56
CHD4-207ENST00000537634 LTBP2Q14767 1821 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 IGKV6D-41A0A0C4DH26 115 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 ZBED4O75132 1171 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 TTLL1O95922 423 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 TSPY3P0CV98 308 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 TSPY8P0CW00 308 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 RARBP10826 455 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 SLC4A3P48751 1232 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 RRP1P56182 461 aaKnown RBP11.53□□□□□ -0.56
CHD4-207ENST00000537634 LRRC41Q15345 812 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 ZNF792Q3KQV3 632 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms