RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 RLFQ13129 1914 aa11.76□□□□□ -0.53
CCDC170-202ENST00000537358 COL11A1P12107 1806 aaPredicted RBP11.75□□□□□ -0.53
CCDC170-202ENST00000537358 PARP14Q460N5 1801 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 MINDY4BA8MYZ0 360 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 RNF113AO15541 343 aaKnown RBP11.75□□□□□ -0.53
CCDC170-202ENST00000537358 FCER1AP12319 257 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 CYP2C19P33261 490 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 BMP8BP34820 402 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 SBK1Q52WX2 424 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 LHX8Q68G74 356 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 CLEC10AQ8IUN9 316 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 ARRDC4Q8NCT1 418 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 NPLOC4Q8TAT6 608 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 ATG4CQ96DT6 458 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 STRBPQ96SI9 672 aaKnown RBP11.75□□□□□ -0.53
CCDC170-202ENST00000537358 NACAP1Q9BZK3 213 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 PRO3102Q9H379 93 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 CTDP1Q9Y5B0 961 aaPredicted RBP11.75□□□□□ -0.53
CCDC170-202ENST00000537358 TTC41PQ6P2S7 1318 aa11.75□□□□□ -0.53
CCDC170-202ENST00000537358 MYH4Q9Y623 1939 aa11.74□□□□□ -0.53
CCDC170-202ENST00000537358 KBTBD13C9JR72 458 aa11.74□□□□□ -0.53
CCDC170-202ENST00000537358 SLC3A2P08195 630 aaKnown RBP11.74□□□□□ -0.53
CCDC170-202ENST00000537358 MNX1P50219 401 aaPredicted RBP11.74□□□□□ -0.53
CCDC170-202ENST00000537358 ZNF444Q8N0Y2 327 aaPredicted RBP11.74□□□□□ -0.53
CCDC170-202ENST00000537358 SENP6Q9GZR1 1112 aaPredicted RBP11.74□□□□□ -0.53
CCDC170-202ENST00000537358 FLRT1Q9NZU1 646 aa11.74□□□□□ -0.53
CCDC170-202ENST00000537358 PRKAG2Q9UGJ0 569 aa11.74□□□□□ -0.53
CCDC170-202ENST00000537358 PFASO15067 1338 aa11.74□□□□□ -0.53
CCDC170-202ENST00000537358 DNM1LO00429 736 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 GPAA1O43292 621 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 CHGBP05060 677 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 COL6A1P12109 1028 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 CYBAP13498 195 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 SYN1P17600 705 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 STAT3P40763 770 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 KCTD2Q14681 263 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 KIAA1755Q5JYT7 1200 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 SIAH1Q8IUQ4 282 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 OSBP2Q969R2 916 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 MMP19Q99542 508 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 GDF15Q99988 308 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 LBHD1Q9BQE6 289 aaPredicted RBP11.73□□□□□ -0.53
CCDC170-202ENST00000537358 FSD1Q9BTV5 496 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 UBE2OQ9C0C9 1292 aaKnown RBP11.73□□□□□ -0.53
CCDC170-202ENST00000537358 PLXNA1Q9UIW2 1896 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 PPP1R9AQ9ULJ8 1098 aa11.73□□□□□ -0.53
CCDC170-202ENST00000537358 ROBO3Q96MS0 1386 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 GSG1L2A8MUP6 293 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 VWA5AO00534 786 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 SEPT4O43236 478 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 RASA1P20936 1047 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 MAGEA10P43363 369 aaPredicted RBP11.72□□□□□ -0.53
CCDC170-202ENST00000537358 PDE4BQ07343 736 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 TMEM132BQ14DG7 1078 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 FAM83BQ5T0W9 1011 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 TSHZ3Q63HK5 1081 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 RIOX2Q8IUF8 465 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 STK11IPQ8N1F8 1099 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 PIP4P2Q8N4L2 257 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 SLF1Q9BQI6 1058 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 NYAP2Q9P242 653 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 NRBP1Q9UHY1 535 aa11.72□□□□□ -0.53
CCDC170-202ENST00000537358 RANBP2P49792 3224 aaKnown RBP11.72□□□□□ -0.53
CCDC170-202ENST00000537358 GREB1LQ9C091 1923 aaPredicted RBP11.72□□□□□ -0.53
CCDC170-202ENST00000537358 PATL2C9JE40 543 aaKnown RBP11.71□□□□□ -0.53
CCDC170-202ENST00000537358 SMIM22K7EJ46 135 aa11.71□□□□□ -0.53
CCDC170-202ENST00000537358 COBLO75128 1261 aa11.71□□□□□ -0.53
CCDC170-202ENST00000537358 ZBED4O75132 1171 aa11.71□□□□□ -0.53
CCDC170-202ENST00000537358 LRRC26Q2I0M4 334 aa11.71□□□□□ -0.53
CCDC170-202ENST00000537358 TDHQ8IZJ6 230 aa11.71□□□□□ -0.53
CCDC170-202ENST00000537358 PRPF38AQ8NAV1 312 aaKnown RBP11.71□□□□□ -0.53
CCDC170-202ENST00000537358 MAML3Q96JK9 1138 aa11.71□□□□□ -0.53
CCDC170-202ENST00000537358 NAPBQ9H115 298 aa11.71□□□□□ -0.53
CCDC170-202ENST00000537358 FBXO28Q9NVF7 368 aa11.71□□□□□ -0.53
CCDC170-202ENST00000537358 CLIP2Q9UDT6 1046 aa11.71□□□□□ -0.53
CCDC170-202ENST00000537358 ADAMTS5Q9UNA0 930 aa11.71□□□□□ -0.53
CCDC170-202ENST00000537358 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.53
CCDC170-202ENST00000537358 F5H6K3 240 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 TSPY3P0CV98 308 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 TSPY8P0CW00 308 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 RARBP10826 455 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 MX1P20591 662 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 ATN1P54259 1190 aaPredicted RBP11.7□□□□□ -0.54
CCDC170-202ENST00000537358 KLRC3Q07444 240 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 GJC2Q5T442 439 aaPredicted RBP11.7□□□□□ -0.54
CCDC170-202ENST00000537358 IFNL3Q8IZI9 196 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 TRPV1Q8NER1 839 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 SPOCK2Q92563 424 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 DDX11Q96FC9 970 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 TEX13BQ9BXU2 312 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 ISY1Q9ULR0 285 aaKnown RBP11.7□□□□□ -0.54
CCDC170-202ENST00000537358 SYNPO2Q9UMS6 1093 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
CCDC170-202ENST00000537358 M0R2C6 588 aa11.69□□□□□ -0.54
CCDC170-202ENST00000537358 TTLL1O95922 423 aa11.69□□□□□ -0.54
CCDC170-202ENST00000537358 NDUFB10O96000 172 aa11.69□□□□□ -0.54
CCDC170-202ENST00000537358 ANO1Q5XXA6 986 aa11.69□□□□□ -0.54
CCDC170-202ENST00000537358 SNRNP48Q6IEG0 339 aaKnown RBP11.69□□□□□ -0.54
CCDC170-202ENST00000537358 GPR153Q6NV75 609 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms