RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 KANK3Q6NY19 840 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 BLIDQ8IZY5 108 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 SPATA20Q8TB22 786 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 SH3GLB2Q9NR46 395 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 KCND1Q9NSA2 647 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 CALML3P27482 149 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 MCM7P33993 719 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 TRAPPC10P48553 1259 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 GNAQP50148 359 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 MORC3Q14149 939 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 NLGN1Q8N2Q7 840 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 NEDD1Q8NHV4 660 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 RASGRP4Q8TDF6 673 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 FANCLQ9NW38 375 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 WWC2Q6AWC2 1192 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 TMC6Q7Z403 805 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 DPF2Q92785 391 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 COA1Q9GZY4 146 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 CPVLQ9H3G5 476 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 PCDHA4Q9UN74 947 aa15.24■□□□□ 0.03
VPS33B-202ENST00000535906 F8W031 263 aaPredicted RBP15.23■□□□□ 0.03
VPS33B-202ENST00000535906 M0R2N6 131 aa15.23■□□□□ 0.03
VPS33B-202ENST00000535906 SLFN14P0C7P3 912 aa15.23■□□□□ 0.03
VPS33B-202ENST00000535906 IL17AQ16552 155 aa15.23■□□□□ 0.03
VPS33B-202ENST00000535906 CEP135Q66GS9 1140 aa15.23■□□□□ 0.03
VPS33B-202ENST00000535906 NYAP1Q6ZVC0 841 aa15.23■□□□□ 0.03
VPS33B-202ENST00000535906 ANKRD7Q92527 254 aa15.23■□□□□ 0.03
VPS33B-202ENST00000535906 CCDC94Q9BW85 323 aaPredicted RBP15.23■□□□□ 0.03
VPS33B-202ENST00000535906 USP27XA6NNY8 438 aa15.23■□□□□ 0.03
VPS33B-202ENST00000535906 CASP1P29466 404 aa15.23■□□□□ 0.03
VPS33B-202ENST00000535906 AFMP43652 599 aa15.23■□□□□ 0.03
VPS33B-202ENST00000535906 FMR1Q06787 632 aaKnown RBP eCLIP15.23■□□□□ 0.03
VPS33B-202ENST00000535906 DHX8Q14562 1220 aaKnown RBP15.23■□□□□ 0.03
VPS33B-202ENST00000535906 CEP95Q96GE4 821 aa15.23■□□□□ 0.03
VPS33B-202ENST00000535906 MXD3Q9BW11 206 aa15.23■□□□□ 0.03
VPS33B-202ENST00000535906 ZC3H12CQ9C0D7 883 aaKnown RBP15.23■□□□□ 0.03
VPS33B-202ENST00000535906 KLRF2D3W0D1 207 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 NPR1P16066 1061 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 UBASH3AP57075 661 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 SYCP1Q15431 976 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 HEATR3Q7Z4Q2 680 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 SH3RF1Q7Z6J0 888 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 MLKLQ8NB16 471 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 CCDC150Q8NCX0 1101 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 PAGE5Q96GU1 130 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 NRXN2Q9P2S2 1712 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 FOCADQ5VW36 1801 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 PLSCR1O15162 318 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 APBA3O96018 575 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 SERPINC1P01008 464 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 PICALMQ13492 652 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 PTPN14Q15678 1187 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 DOK7Q18PE1 504 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 HSP90AA4PQ58FG1 418 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 ARMCX5Q6P1M9 558 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 CCAR2Q8N163 923 aaKnown RBP15.22■□□□□ 0.03
VPS33B-202ENST00000535906 C4orf32Q8N8J7 132 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 TRIML1Q8N9V2 468 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 CCDC112Q8NEF3 446 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 MED15Q96RN5 788 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 BARHL2Q9NY43 387 aa15.22■□□□□ 0.03
VPS33B-202ENST00000535906 STXBP3O00186 592 aa15.21■□□□□ 0.03
VPS33B-202ENST00000535906 USP17L2Q6R6M4 530 aa15.21■□□□□ 0.03
VPS33B-202ENST00000535906 PCDHA6Q9UN73 950 aa15.21■□□□□ 0.03
VPS33B-202ENST00000535906 PCDHA8Q9Y5H6 950 aa15.21■□□□□ 0.03
VPS33B-202ENST00000535906 MMP10P09238 476 aa15.21■□□□□ 0.02
VPS33B-202ENST00000535906 DPP8Q6V1X1 898 aaPredicted RBP15.21■□□□□ 0.02
VPS33B-202ENST00000535906 TRMT44Q8IYL2 757 aaKnown RBP15.21■□□□□ 0.02
VPS33B-202ENST00000535906 DDX4Q9NQI0 724 aaKnown RBP15.21■□□□□ 0.02
VPS33B-202ENST00000535906 TTF2Q9UNY4 1162 aaKnown RBP15.21■□□□□ 0.02
VPS33B-202ENST00000535906 PARP1P09874 1014 aaKnown RBP15.2■□□□□ 0.02
VPS33B-202ENST00000535906 CFAP100Q494V2 611 aa15.2■□□□□ 0.02
VPS33B-202ENST00000535906 LZTS2Q9BRK4 669 aa15.2■□□□□ 0.02
VPS33B-202ENST00000535906 SPZ1Q9BXG8 430 aa15.2■□□□□ 0.02
VPS33B-202ENST00000535906 SUGT1Q9Y2Z0 365 aa15.2■□□□□ 0.02
VPS33B-202ENST00000535906 NFE2L3Q9Y4A8 694 aa15.2■□□□□ 0.02
VPS33B-202ENST00000535906 TOP1P11387 765 aaKnown RBP15.19■□□□□ 0.02
VPS33B-202ENST00000535906 HMGB2P26583 209 aaKnown RBP15.19■□□□□ 0.02
VPS33B-202ENST00000535906 ALDH1B1P30837 517 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 NOVP48745 357 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 SCNN1DP51172 638 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 DPYDQ12882 1025 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 E2F4Q16254 413 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 DAGLBQ8NCG7 672 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 CCDC148Q8NFR7 591 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 ENOX1Q8TC92 643 aaKnown RBP15.19■□□□□ 0.02
VPS33B-202ENST00000535906 STAMQ92783 540 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 CCDC34Q96HJ3 373 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 DACH1Q9UI36 760 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 CCDC194A0A1B0GVG4 234 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 MYO1BO43795 1136 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 SFPQP23246 707 aaKnown RBP eCLIP15.19■□□□□ 0.02
VPS33B-202ENST00000535906 KCNJ6P48051 423 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 GABPAQ06546 454 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 PTPN21Q16825 1174 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 ARL6IP4Q66PJ3 421 aaKnown RBP15.19■□□□□ 0.02
VPS33B-202ENST00000535906 PDCL2Q8N4E4 241 aa15.19■□□□□ 0.02
VPS33B-202ENST00000535906 TRMT1Q9NXH9 659 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms