RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 SPICE1Q8N0Z3 855 aa15.07■□□□□ 0
USF1-211ENST00000534633 DEFB123Q8N688 67 aa15.07■□□□□ 0
USF1-211ENST00000534633 SLC17A8Q8NDX2 589 aa15.07■□□□□ 0
USF1-211ENST00000534633 ATG4CQ96DT6 458 aa15.07■□□□□ 0
USF1-211ENST00000534633 SEPT4O43236 478 aa15.06■□□□□ 0
USF1-211ENST00000534633 COBLO75128 1261 aa15.06■□□□□ 0
USF1-211ENST00000534633 SLC25A27O95847 323 aa15.06■□□□□ 0
USF1-211ENST00000534633 LBHD1Q9BQE6 289 aaPredicted RBP15.06■□□□□ 0
USF1-211ENST00000534633 LRRCC1Q9C099 1032 aa15.06■□□□□ 0
USF1-211ENST00000534633 KANSL2Q9H9L4 492 aa15.06■□□□□ 0
USF1-211ENST00000534633 SLC4A4Q9Y6R1 1079 aa15.06■□□□□ 0
USF1-211ENST00000534633 KBTBD13C9JR72 458 aa15.05■□□□□ -0
USF1-211ENST00000534633 SMIM22K7EJ46 135 aa15.05■□□□□ -0
USF1-211ENST00000534633 FCER1AP12319 257 aa15.05■□□□□ -0
USF1-211ENST00000534633 EEF2P13639 858 aaKnown RBP15.05■□□□□ -0
USF1-211ENST00000534633 ATN1P54259 1190 aaPredicted RBP15.05■□□□□ -0
USF1-211ENST00000534633 GJC2Q5T442 439 aaPredicted RBP15.05■□□□□ -0
USF1-211ENST00000534633 MAML3Q96JK9 1138 aa15.05■□□□□ -0
USF1-211ENST00000534633 GOPCQ9HD26 462 aa15.05■□□□□ -0
USF1-211ENST00000534633 ARPP21Q9UBL0 812 aaPredicted RBP15.05■□□□□ -0
USF1-211ENST00000534633 ADAMTS5Q9UNA0 930 aa15.05■□□□□ -0
USF1-211ENST00000534633 CHGBP05060 677 aa15.04■□□□□ -0
USF1-211ENST00000534633 RTP1P59025 263 aa15.04■□□□□ -0
USF1-211ENST00000534633 TMEM132BQ14DG7 1078 aa15.04■□□□□ -0
USF1-211ENST00000534633 CTR9Q6PD62 1173 aa15.04■□□□□ -0
USF1-211ENST00000534633 Q7L0L9 218 aa15.04■□□□□ -0
USF1-211ENST00000534633 RIOX2Q8IUF8 465 aa15.04■□□□□ -0
USF1-211ENST00000534633 PUS7LQ9H0K6 701 aaKnown RBP15.04■□□□□ -0
USF1-211ENST00000534633 PRKAG2Q9UGJ0 569 aa15.04■□□□□ -0
USF1-211ENST00000534633 LAMA2P24043 3122 aaKnown RBP15.04■□□□□ -0
USF1-211ENST00000534633 ANO1Q5XXA6 986 aa15.03■□□□□ -0
USF1-211ENST00000534633 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
USF1-211ENST00000534633 MTMR10Q9NXD2 777 aa15.03■□□□□ -0
USF1-211ENST00000534633 NRBP1Q9UHY1 535 aa15.03■□□□□ -0
USF1-211ENST00000534633 STXBP5LQ9Y2K9 1186 aa15.03■□□□□ -0
USF1-211ENST00000534633 VWA5AO00534 786 aa15.02■□□□□ -0
USF1-211ENST00000534633 COPB2P35606 906 aa15.02■□□□□ -0
USF1-211ENST00000534633 SNX17Q15036 470 aa15.02■□□□□ -0
USF1-211ENST00000534633 SBK1Q52WX2 424 aa15.02■□□□□ -0
USF1-211ENST00000534633 PRAMEF19Q5SWL8 479 aa15.02■□□□□ -0
USF1-211ENST00000534633 GIMAP6Q6P9H5 292 aa15.02■□□□□ -0
USF1-211ENST00000534633 SLC39A5Q6ZMH5 540 aa15.02■□□□□ -0
USF1-211ENST00000534633 SMC5Q8IY18 1101 aa15.02■□□□□ -0
USF1-211ENST00000534633 MMP19Q99542 508 aa15.02■□□□□ -0
USF1-211ENST00000534633 ECHDC1Q9NTX5 307 aa15.02■□□□□ -0
USF1-211ENST00000534633 FBXO28Q9NVF7 368 aa15.02■□□□□ -0
USF1-211ENST00000534633 PPP1R9AQ9ULJ8 1098 aa15.02■□□□□ -0
USF1-211ENST00000534633 ATP11BQ9Y2G3 1177 aa15.02■□□□□ -0
USF1-211ENST00000534633 DIS3Q9Y2L1 958 aaKnown RBP15.02■□□□□ -0
USF1-211ENST00000534633 ROBO3Q96MS0 1386 aa15.01□□□□□ -0.01
USF1-211ENST00000534633 STAT3P40763 770 aa15.01□□□□□ -0.01
USF1-211ENST00000534633 KCTD2Q14681 263 aa15.01□□□□□ -0.01
USF1-211ENST00000534633 LRRC41Q15345 812 aa15.01□□□□□ -0.01
USF1-211ENST00000534633 FAM47AQ5JRC9 791 aa15.01□□□□□ -0.01
USF1-211ENST00000534633 FAM83BQ5T0W9 1011 aa15.01□□□□□ -0.01
USF1-211ENST00000534633 STRBPQ96SI9 672 aaKnown RBP15.01□□□□□ -0.01
USF1-211ENST00000534633 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.01□□□□□ -0.01
USF1-211ENST00000534633 RWDD1Q9H446 243 aaPredicted RBP15.01□□□□□ -0.01
USF1-211ENST00000534633 ZNF214Q9UL59 606 aaPredicted RBP15.01□□□□□ -0.01
USF1-211ENST00000534633 MCM3APO60318 1980 aa15□□□□□ -0.01
USF1-211ENST00000534633 GSG1L2A8MUP6 293 aa15□□□□□ -0.01
USF1-211ENST00000534633 DLL1O00548 723 aa15□□□□□ -0.01
USF1-211ENST00000534633 RAD21O60216 631 aa15□□□□□ -0.01
USF1-211ENST00000534633 MYCNP04198 464 aaPredicted RBP15□□□□□ -0.01
USF1-211ENST00000534633 RASA1P20936 1047 aa15□□□□□ -0.01
USF1-211ENST00000534633 ADCYAP1R1P41586 468 aa15□□□□□ -0.01
USF1-211ENST00000534633 ZNF792Q3KQV3 632 aa15□□□□□ -0.01
USF1-211ENST00000534633 C1orf53Q5VUE5 145 aa15□□□□□ -0.01
USF1-211ENST00000534633 FAM109BQ6ICB4 259 aaPredicted RBP15□□□□□ -0.01
USF1-211ENST00000534633 KBTBD3Q8NAB2 608 aa15□□□□□ -0.01
USF1-211ENST00000534633 REPS2Q8NFH8 660 aa15□□□□□ -0.01
USF1-211ENST00000534633 OTUD7AQ8TE49 926 aaPredicted RBP15□□□□□ -0.01
USF1-211ENST00000534633 TINF2Q9BSI4 451 aa15□□□□□ -0.01
USF1-211ENST00000534633 POTEB2H3BUK9 544 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 PGK2P07205 417 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 RARBP10826 455 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 TRIM60Q495X7 471 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 APPBP2Q92624 585 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 GPATCH3Q96I76 525 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 SLF1Q9BQI6 1058 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 MKNK2Q9HBH9 465 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 XPNPEP3Q9NQH7 507 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 NYAP2Q9P242 653 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 PHF24Q9UPV7 400 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 A0A0C4DFX4 3053 aa14.99□□□□□ -0.01
USF1-211ENST00000534633 ZFYP08048 801 aaPredicted RBP14.98□□□□□ -0.01
USF1-211ENST00000534633 ANKRD45Q5TZF3 282 aa14.98□□□□□ -0.01
USF1-211ENST00000534633 RNF180Q86T96 592 aa14.98□□□□□ -0.01
USF1-211ENST00000534633 MSL3Q8N5Y2 521 aaKnown RBP14.98□□□□□ -0.01
USF1-211ENST00000534633 OSBP2Q969R2 916 aa14.98□□□□□ -0.01
USF1-211ENST00000534633 FERMT2Q96AC1 680 aa14.98□□□□□ -0.01
USF1-211ENST00000534633 TEX13BQ9BXU2 312 aa14.98□□□□□ -0.01
USF1-211ENST00000534633 PRDM5Q9NQX1 630 aaPredicted RBP14.98□□□□□ -0.01
USF1-211ENST00000534633 PDLIM7Q9NR12 457 aa14.98□□□□□ -0.01
USF1-211ENST00000534633 SALL3Q9BXA9 1300 aa14.97□□□□□ -0.01
USF1-211ENST00000534633 MINDY4BA8MYZ0 360 aa14.97□□□□□ -0.01
USF1-211ENST00000534633 F5H6K3 240 aa14.97□□□□□ -0.01
USF1-211ENST00000534633 RNF113AO15541 343 aaKnown RBP14.97□□□□□ -0.01
USF1-211ENST00000534633 GPAA1O43292 621 aa14.97□□□□□ -0.01
USF1-211ENST00000534633 CENPBP07199 599 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms