RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 NOS2P35228 1153 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 PLA2G4AP47712 749 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 GPSM2P81274 684 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 NFX1Q12986 1120 aaKnown RBP9.46□□□□□ -0.9
CASP4-212ENST00000533730 LDHAL6AQ6ZMR3 332 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 ZNF662Q6ZS27 426 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 ANKRD44Q8N8A2 993 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 ARMC5Q96C12 935 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 ZNF277Q9NRM2 450 aaPredicted RBP9.46□□□□□ -0.9
CASP4-212ENST00000533730 KLK14Q9P0G3 267 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 DDX41Q9UJV9 622 aaKnown RBP9.46□□□□□ -0.9
CASP4-212ENST00000533730 GGA1Q9UJY5 639 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 TNNQ9UQP3 1299 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 INPP5FQ9Y2H2 1132 aa9.46□□□□□ -0.9
CASP4-212ENST00000533730 LRRFIP2Q9Y608 721 aaKnown RBP9.46□□□□□ -0.9
CASP4-212ENST00000533730 TAF1P21675 1872 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 DICER1Q9UPY3 1922 aaKnown RBP9.45□□□□□ -0.9
CASP4-212ENST00000533730 SERTM1A2A2V5 107 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 PPIP5K2O43314 1243 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 UFL1O94874 794 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 RLBP1P12271 317 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 RACK1P63244 317 aaKnown RBP9.45□□□□□ -0.9
CASP4-212ENST00000533730 KIAA2012Q0VF49 1180 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 MTX1Q13505 466 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 C11orf91Q3C1V1 193 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 NIM1KQ8IY84 436 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 ALDH16A1Q8IZ83 802 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 CNNM1Q9NRU3 951 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 DDX19BQ9UMR2 479 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 MINPP1Q9UNW1 487 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 LEMD3Q9Y2U8 911 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 HCN4Q9Y3Q4 1203 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 KDM2BQ8NHM5 1336 aa9.45□□□□□ -0.9
CASP4-212ENST00000533730 EIF1AYO14602 144 aaKnown RBP9.44□□□□□ -0.9
CASP4-212ENST00000533730 ATP4AP20648 1035 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 VEGFBP49765 207 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 PRELPP51888 382 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 HIRAP54198 1017 aaPredicted RBP9.44□□□□□ -0.9
CASP4-212ENST00000533730 ARID5AQ03989 594 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 MVPQ14764 893 aaKnown RBP9.44□□□□□ -0.9
CASP4-212ENST00000533730 RTN1Q16799 776 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 AOC3Q16853 763 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 LCE2AQ5TA79 106 aaPredicted RBP9.44□□□□□ -0.9
CASP4-212ENST00000533730 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 ANKRD13AQ8IZ07 590 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 ZNF654Q8IZM8 581 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 TBC1D16Q8TBP0 767 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 PANK1Q8TE04 598 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 IFT43Q96FT9 208 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 ZC3H12CQ9C0D7 883 aaKnown RBP9.44□□□□□ -0.9
CASP4-212ENST00000533730 POLLQ9UGP5 575 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 ZNF232Q9UNY5 417 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 TMA7Q9Y2S6 64 aaKnown RBP9.44□□□□□ -0.9
CASP4-212ENST00000533730 MROH5Q6ZUA9 1318 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 DUOX1Q9NRD9 1551 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 COL4A1P02462 1669 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 LTBP1Q14766 1721 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 TIAM2Q8IVF5 1701 aa9.44□□□□□ -0.9
CASP4-212ENST00000533730 CCDC88AQ3V6T2 1871 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 MED23Q9ULK4 1368 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 GLTPD2A6NH11 291 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 FZD9O00144 591 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 OPLAHO14841 1288 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 PLIN1O60240 522 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 F11P03951 625 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 THBS1P07996 1170 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 MSX1P28360 303 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 KCNJ4P48050 445 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 EIF6P56537 245 aaKnown RBP9.43□□□□□ -0.9
CASP4-212ENST00000533730 CHRNDQ07001 517 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 USP48Q86UV5 1035 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 NANOS1Q8WY41 292 aaKnown RBP9.43□□□□□ -0.9
CASP4-212ENST00000533730 FRMD6Q96NE9 622 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 PIF1Q9H611 641 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 ZDHHC3Q9NYG2 299 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 ZNRF3Q9ULT6 936 aa9.43□□□□□ -0.9
CASP4-212ENST00000533730 SPEF2Q9C093 1822 aa9.42□□□□□ -0.9
CASP4-212ENST00000533730 ZNF804BA4D1E1 1349 aa9.42□□□□□ -0.9
CASP4-212ENST00000533730 A6NHS1 94 aa9.42□□□□□ -0.9
CASP4-212ENST00000533730 SRGAP3O43295 1099 aa9.42□□□□□ -0.9
CASP4-212ENST00000533730 CIAO1O76071 339 aa9.42□□□□□ -0.9
CASP4-212ENST00000533730 VSIG8P0DPA2 414 aa9.42□□□□□ -0.9
CASP4-212ENST00000533730 EIF4BP23588 611 aaKnown RBP9.42□□□□□ -0.9
CASP4-212ENST00000533730 TXLNAP40222 546 aa9.42□□□□□ -0.9
CASP4-212ENST00000533730 RFX5P48382 616 aaPredicted RBP9.42□□□□□ -0.9
CASP4-212ENST00000533730 RRP1P56182 461 aaKnown RBP9.42□□□□□ -0.9
CASP4-212ENST00000533730 SLC51AQ86UW1 340 aa9.42□□□□□ -0.9
CASP4-212ENST00000533730 GPR152Q8TDT2 470 aa9.42□□□□□ -0.9
CASP4-212ENST00000533730 GAS2L1Q99501 681 aaPredicted RBP9.42□□□□□ -0.9
CASP4-212ENST00000533730 COPRSQ9NQ92 184 aa9.42□□□□□ -0.9
CASP4-212ENST00000533730 RIPOR2Q9Y4F9 1068 aa9.42□□□□□ -0.9
CASP4-212ENST00000533730 EYA2O00167 538 aa9.41□□□□□ -0.9
CASP4-212ENST00000533730 PTPN12Q05209 780 aaKnown RBP9.41□□□□□ -0.9
CASP4-212ENST00000533730 UBE4AQ14139 1066 aa9.41□□□□□ -0.9
CASP4-212ENST00000533730 TNIP1Q15025 636 aa9.41□□□□□ -0.9
CASP4-212ENST00000533730 DBN1Q16643 649 aa9.41□□□□□ -0.9
CASP4-212ENST00000533730 C8orf34Q49A92 452 aa9.41□□□□□ -0.9
CASP4-212ENST00000533730 METTL24Q5JXM2 366 aa9.41□□□□□ -0.9
CASP4-212ENST00000533730 C15orf52Q6ZUT6 534 aaKnown RBP9.41□□□□□ -0.9
CASP4-212ENST00000533730 GPC2Q8N158 579 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms