RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 ARHGEF10LQ9HCE6 1279 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 SWAP70Q9UH65 585 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 STRNO43815 780 aa18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 MBD4O95243 580 aa18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 IGHA2P01877 340 aa18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 SHHQ15465 462 aa18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 USP38Q8NB14 1042 aa18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 MAFAQ8NHW3 353 aaPredicted RBP18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 ATG4CQ96DT6 458 aa18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 KIF1BPQ96EK5 621 aa18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 SH2D4AQ9H788 454 aa18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 PRDM5Q9NQX1 630 aaPredicted RBP18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 MYH4Q9Y623 1939 aa18.95■□□□□ 0.62
CHMP4A-207ENST00000533523 COBLO75128 1261 aa18.94■□□□□ 0.62
CHMP4A-207ENST00000533523 AKR1B1P15121 316 aa18.94■□□□□ 0.62
CHMP4A-207ENST00000533523 ARRDC4Q8NCT1 418 aa18.94■□□□□ 0.62
CHMP4A-207ENST00000533523 SEMA6BQ9H3T3 888 aa18.94■□□□□ 0.62
CHMP4A-207ENST00000533523 PAG1Q9NWQ8 432 aa18.94■□□□□ 0.62
CHMP4A-207ENST00000533523 SLC5A4Q9NY91 659 aa18.94■□□□□ 0.62
CHMP4A-207ENST00000533523 NCOR1O75376 2440 aa18.94■□□□□ 0.62
CHMP4A-207ENST00000533523 MCM3APO60318 1980 aa18.93■□□□□ 0.62
CHMP4A-207ENST00000533523 SEPT4O43236 478 aa18.93■□□□□ 0.62
CHMP4A-207ENST00000533523 PRKAB2O43741 272 aa18.93■□□□□ 0.62
CHMP4A-207ENST00000533523 DSG3P32926 999 aa18.93■□□□□ 0.62
CHMP4A-207ENST00000533523 SLFNL1Q499Z3 407 aa18.93■□□□□ 0.62
CHMP4A-207ENST00000533523 AMOTL1Q8IY63 956 aa18.93■□□□□ 0.62
CHMP4A-207ENST00000533523 MROH8Q9H579 483 aa18.93■□□□□ 0.62
CHMP4A-207ENST00000533523 GREB1LQ9C091 1923 aaPredicted RBP18.93■□□□□ 0.62
CHMP4A-207ENST00000533523 TRANK1O15050 2925 aa18.92■□□□□ 0.62
CHMP4A-207ENST00000533523 RAB11FIP3O75154 756 aa18.92■□□□□ 0.62
CHMP4A-207ENST00000533523 TRIM60Q495X7 471 aa18.92■□□□□ 0.62
CHMP4A-207ENST00000533523 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
CHMP4A-207ENST00000533523 VCPKMTQ9H867 229 aa18.92■□□□□ 0.62
CHMP4A-207ENST00000533523 CYP2D7A0A087X1C5 515 aa18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 WDR46O15213 610 aaKnown RBP18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 RAD21O60216 631 aa18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 ADD2P35612 726 aa18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 FAM47AQ5JRC9 791 aa18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 PRAMEF19Q5SWL8 479 aa18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 ZNF697Q5TEC3 545 aa18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 SIRT2Q8IXJ6 389 aa18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 ABRAQ8N0Z2 381 aa18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 BOLA2Q9H3K6 86 aa18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 ATP8A2Q9NTI2 1148 aa18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 TMX2Q9Y320 296 aa18.91■□□□□ 0.62
CHMP4A-207ENST00000533523 FCER1AP12319 257 aa18.9■□□□□ 0.62
CHMP4A-207ENST00000533523 LRRC41Q15345 812 aa18.9■□□□□ 0.62
CHMP4A-207ENST00000533523 SLC39A5Q6ZMH5 540 aa18.9■□□□□ 0.62
CHMP4A-207ENST00000533523 FERMT2Q96AC1 680 aa18.9■□□□□ 0.62
CHMP4A-207ENST00000533523 DDRGK1Q96HY6 314 aa18.9■□□□□ 0.62
CHMP4A-207ENST00000533523 MAML3Q96JK9 1138 aa18.9■□□□□ 0.62
CHMP4A-207ENST00000533523 MMP19Q99542 508 aa18.9■□□□□ 0.62
CHMP4A-207ENST00000533523 MYO9BQ13459 2157 aa18.9■□□□□ 0.62
CHMP4A-207ENST00000533523 SMIM22K7EJ46 135 aa18.89■□□□□ 0.61
CHMP4A-207ENST00000533523 ITGB8P26012 769 aa18.89■□□□□ 0.61
CHMP4A-207ENST00000533523 ADCYAP1R1P41586 468 aa18.89■□□□□ 0.61
CHMP4A-207ENST00000533523 CDK8P49336 464 aa18.89■□□□□ 0.61
CHMP4A-207ENST00000533523 TMEM132BQ14DG7 1078 aa18.89■□□□□ 0.61
CHMP4A-207ENST00000533523 SH3RF1Q7Z6J0 888 aa18.89■□□□□ 0.61
CHMP4A-207ENST00000533523 SIAH1Q8IUQ4 282 aa18.89■□□□□ 0.61
CHMP4A-207ENST00000533523 CCDC17Q96LX7 622 aa18.89■□□□□ 0.61
CHMP4A-207ENST00000533523 PDLIM7Q9NR12 457 aa18.89■□□□□ 0.61
CHMP4A-207ENST00000533523 SLC25A27O95847 323 aa18.88■□□□□ 0.61
CHMP4A-207ENST00000533523 CHGBP05060 677 aa18.88■□□□□ 0.61
CHMP4A-207ENST00000533523 EPHB4P54760 987 aa18.88■□□□□ 0.61
CHMP4A-207ENST00000533523 C12orf60Q5U649 245 aa18.88■□□□□ 0.61
CHMP4A-207ENST00000533523 C16orf86Q6ZW13 317 aa18.88■□□□□ 0.61
CHMP4A-207ENST00000533523 GOPCQ9HD26 462 aa18.88■□□□□ 0.61
CHMP4A-207ENST00000533523 FBXO28Q9NVF7 368 aa18.88■□□□□ 0.61
CHMP4A-207ENST00000533523 USP17L12C9JPN9 530 aa18.87■□□□□ 0.61
CHMP4A-207ENST00000533523 USP17L21D6R901 530 aa18.87■□□□□ 0.61
CHMP4A-207ENST00000533523 PGK2P07205 417 aa18.87■□□□□ 0.61
CHMP4A-207ENST00000533523 RARBP10826 455 aa18.87■□□□□ 0.61
CHMP4A-207ENST00000533523 EEF2P13639 858 aaKnown RBP18.87■□□□□ 0.61
CHMP4A-207ENST00000533523 SNX17Q15036 470 aa18.87■□□□□ 0.61
CHMP4A-207ENST00000533523 BADQ92934 168 aa18.87■□□□□ 0.61
CHMP4A-207ENST00000533523 XPNPEP3Q9NQH7 507 aa18.87■□□□□ 0.61
CHMP4A-207ENST00000533523 SLC4A4Q9Y6R1 1079 aa18.87■□□□□ 0.61
CHMP4A-207ENST00000533523 TRIM43BA6NCK2 446 aa18.86■□□□□ 0.61
CHMP4A-207ENST00000533523 ATP5JP18859 108 aa18.86■□□□□ 0.61
CHMP4A-207ENST00000533523 COL9A1P20849 921 aa18.86■□□□□ 0.61
CHMP4A-207ENST00000533523 KCTD2Q14681 263 aa18.86■□□□□ 0.61
CHMP4A-207ENST00000533523 FAM83BQ5T0W9 1011 aa18.86■□□□□ 0.61
CHMP4A-207ENST00000533523 TRIM43Q96BQ3 446 aaPredicted RBP18.86■□□□□ 0.61
CHMP4A-207ENST00000533523 HAUS7Q99871 368 aa18.86■□□□□ 0.61
CHMP4A-207ENST00000533523 ROBO3Q96MS0 1386 aa18.85■□□□□ 0.61
CHMP4A-207ENST00000533523 PGK1P00558 417 aa18.85■□□□□ 0.61
CHMP4A-207ENST00000533523 RIOX2Q8IUF8 465 aa18.85■□□□□ 0.61
CHMP4A-207ENST00000533523 LENG1Q96BZ8 264 aaPredicted RBP18.85■□□□□ 0.61
CHMP4A-207ENST00000533523 KANSL2Q9H9L4 492 aa18.85■□□□□ 0.61
CHMP4A-207ENST00000533523 PPP1R9AQ9ULJ8 1098 aa18.85■□□□□ 0.61
CHMP4A-207ENST00000533523 VWA5AO00534 786 aa18.84■□□□□ 0.61
CHMP4A-207ENST00000533523 AAMPQ13685 434 aa18.84■□□□□ 0.61
CHMP4A-207ENST00000533523 UBE3CQ15386 1083 aa18.84■□□□□ 0.61
CHMP4A-207ENST00000533523 RNF180Q86T96 592 aa18.84■□□□□ 0.61
CHMP4A-207ENST00000533523 TINF2Q9BSI4 451 aa18.84■□□□□ 0.61
CHMP4A-207ENST00000533523 NRBP1Q9UHY1 535 aa18.84■□□□□ 0.61
CHMP4A-207ENST00000533523 PHF24Q9UPV7 400 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms