RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ADPGKQ9BRR6 497 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 MINPP1Q9UNW1 487 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 CTAGE9A4FU28 777 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 STAT2P52630 851 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 FANCBQ8NB91 859 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 WRNIP1Q96S55 665 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 NT5C3AQ9H0P0 336 aa12.6□□□□□ -0.39
PTPRK-221ENST00000532331 KRT19P08727 400 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 CALRP27797 417 aaKnown RBP12.59□□□□□ -0.39
PTPRK-221ENST00000532331 SNX16P57768 344 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 SLFN12Q8IYM2 578 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 COA7Q96BR5 231 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 SUGCTQ9HAC7 445 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 HERC4Q5GLZ8 1057 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-221ENST00000532331 FAM102BQ5T8I3 360 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 CD209Q9NNX6 404 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 A0A1B0GVL5 298 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 RNF187Q5TA31 235 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-221ENST00000532331 DEFB132Q7Z7B7 95 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 KIFAP3Q92845 792 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 LUC7L2Q9Y383 392 aaKnown RBP12.59□□□□□ -0.39
PTPRK-221ENST00000532331 XKR9Q5GH70 373 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 SEPT14Q6ZU15 432 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 KCTD1Q719H9 257 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 BLIDQ8IZY5 108 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 TDRD3Q9H7E2 651 aaKnown RBP12.59□□□□□ -0.39
PTPRK-221ENST00000532331 IFNKQ9P0W0 207 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 HACL1Q9UJ83 578 aa12.59□□□□□ -0.39
PTPRK-221ENST00000532331 MRPS9P82933 396 aaKnown RBP12.58□□□□□ -0.39
PTPRK-221ENST00000532331 CABP7Q86V35 215 aa12.58□□□□□ -0.39
PTPRK-221ENST00000532331 ABI1Q8IZP0 508 aa12.58□□□□□ -0.39
PTPRK-221ENST00000532331 KDM3AQ9Y4C1 1321 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 PRPF6O94906 941 aaKnown RBP12.58□□□□□ -0.4
PTPRK-221ENST00000532331 MYL5Q02045 173 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 CELF1Q92879 486 aaKnown RBP12.58□□□□□ -0.4
PTPRK-221ENST00000532331 SRRTQ9BXP5 876 aaKnown RBP12.58□□□□□ -0.4
PTPRK-221ENST00000532331 PODXL2Q9NZ53 605 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 ABCA6Q8N139 1617 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 SEC24BO95487 1268 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 RAPGEF1Q13905 1077 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 SPECC1LQ69YQ0 1117 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 FAM107BQ9H098 131 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 SOS2Q07890 1332 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-221ENST00000532331 ADD2P35612 726 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 GALNT17Q6IS24 598 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 MRPL44Q9H9J2 332 aaKnown RBP12.58□□□□□ -0.4
PTPRK-221ENST00000532331 RNF216Q9NWF9 866 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-221ENST00000532331 LRFN2Q9ULH4 789 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 GCNT3O95395 438 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 YARSP54577 528 aaKnown RBP12.58□□□□□ -0.4
PTPRK-221ENST00000532331 GPSM2P81274 684 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 NOX5Q96PH1 765 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 CCDC77Q9BR77 488 aa12.58□□□□□ -0.4
PTPRK-221ENST00000532331 TMEM110-MUSTN1A8MSY1 372 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 CETN3O15182 167 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 PTPN12Q05209 780 aaKnown RBP12.57□□□□□ -0.4
PTPRK-221ENST00000532331 PPP1R14CQ8TAE6 165 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 ZNRF3Q9ULT6 936 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 ZHX2Q9Y6X8 837 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 ZNF853P0CG23 659 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 CMTR1Q8N1G2 835 aaKnown RBP12.57□□□□□ -0.4
PTPRK-221ENST00000532331 IWS1Q96ST2 819 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 CDHR2Q9BYE9 1310 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 A0A1W2PRG0 241 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 DYNC1I1O14576 645 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 SCG2P13521 617 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 CNGA4Q8IV77 575 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 SREK1Q8WXA9 508 aaKnown RBP12.57□□□□□ -0.4
PTPRK-221ENST00000532331 ADCY9O60503 1353 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 ATP2A1O14983 1001 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 CCND2P30279 289 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 CACNB3P54284 484 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
PTPRK-221ENST00000532331 TLR7Q9NYK1 1049 aaKnown RBP12.57□□□□□ -0.4
PTPRK-221ENST00000532331 P4HA1P13674 534 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 RAD51AP2Q09MP3 1159 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 SYDE2Q5VT97 1194 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 DYMQ7RTS9 669 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 GSTA5Q7RTV2 222 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 H0YCG3 227 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 EXOC3O60645 756 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 CUTAO60888 179 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 XRCC6P12956 609 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTPRK-221ENST00000532331 POLGP54098 1239 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-221ENST00000532331 ZMYM1Q5SVZ6 1142 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 LCORLQ8N3X6 602 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 OTUD6BQ8N6M0 293 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-221ENST00000532331 KCNH3Q9ULD8 1083 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 FERP16591 822 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 GPKOWQ92917 476 aaPredicted RBP eCLIP12.56□□□□□ -0.4
PTPRK-221ENST00000532331 ARFGAP3Q9NP61 516 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 PCDHA12Q9UN75 941 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 TMEM179Q6ZVK1 233 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 CCDC50Q8IVM0 306 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 CDHR1Q96JP9 859 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 CRAMP1Q96RY5 1269 aa12.56□□□□□ -0.4
PTPRK-221ENST00000532331 DDX25Q9UHL0 483 aaKnown RBP12.56□□□□□ -0.4
PTPRK-221ENST00000532331 NCOA3Q9Y6Q9 1424 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms