RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 RASA1P20936 1047 aa20.13■□□□□ 0.81
CPSF1-207ENST00000531727 CNGA1P29973 690 aa20.13■□□□□ 0.81
CPSF1-207ENST00000531727 TMEM132BQ14DG7 1078 aa20.13■□□□□ 0.81
CPSF1-207ENST00000531727 STK11IPQ8N1F8 1099 aa20.13■□□□□ 0.81
CPSF1-207ENST00000531727 TRPV1Q8NER1 839 aa20.13■□□□□ 0.81
CPSF1-207ENST00000531727 PI4K2BQ8TCG2 481 aa20.13■□□□□ 0.81
CPSF1-207ENST00000531727 GDF15Q99988 308 aa20.13■□□□□ 0.81
CPSF1-207ENST00000531727 FBXO28Q9NVF7 368 aa20.13■□□□□ 0.81
CPSF1-207ENST00000531727 SLC5A4Q9NY91 659 aa20.13■□□□□ 0.81
CPSF1-207ENST00000531727 COBLO75128 1261 aa20.12■□□□□ 0.81
CPSF1-207ENST00000531727 SLC25A27O95847 323 aa20.12■□□□□ 0.81
CPSF1-207ENST00000531727 CYBAP13498 195 aa20.12■□□□□ 0.81
CPSF1-207ENST00000531727 RRP1P56182 461 aaKnown RBP20.12■□□□□ 0.81
CPSF1-207ENST00000531727 RAD21O60216 631 aa20.11■□□□□ 0.81
CPSF1-207ENST00000531727 FCER1AP12319 257 aa20.11■□□□□ 0.81
CPSF1-207ENST00000531727 BMP8BP34820 402 aa20.11■□□□□ 0.81
CPSF1-207ENST00000531727 TDO2P48775 406 aa20.11■□□□□ 0.81
CPSF1-207ENST00000531727 FAM83BQ5T0W9 1011 aa20.11■□□□□ 0.81
CPSF1-207ENST00000531727 OTUD7AQ8TE49 926 aaPredicted RBP20.11■□□□□ 0.81
CPSF1-207ENST00000531727 NYAP2Q9P242 653 aa20.11■□□□□ 0.81
CPSF1-207ENST00000531727 PPP1R9AQ9ULJ8 1098 aa20.11■□□□□ 0.81
CPSF1-207ENST00000531727 PATL2C9JE40 543 aaKnown RBP20.1■□□□□ 0.81
CPSF1-207ENST00000531727 VWA5AO00534 786 aa20.1■□□□□ 0.81
CPSF1-207ENST00000531727 APPP05067 770 aa20.1■□□□□ 0.81
CPSF1-207ENST00000531727 SYN1P17600 705 aa20.1■□□□□ 0.81
CPSF1-207ENST00000531727 LRRC26Q2I0M4 334 aa20.1■□□□□ 0.81
CPSF1-207ENST00000531727 RIOX2Q8IUF8 465 aa20.1■□□□□ 0.81
CPSF1-207ENST00000531727 ZNF287Q9HBT7 754 aa20.1■□□□□ 0.81
CPSF1-207ENST00000531727 ZNFX1Q9P2E3 1918 aaKnown RBP20.1■□□□□ 0.81
CPSF1-207ENST00000531727 IGKV6D-41A0A0C4DH26 115 aa20.09■□□□□ 0.81
CPSF1-207ENST00000531727 IFNL3Q8IZI9 196 aa20.09■□□□□ 0.81
CPSF1-207ENST00000531727 MAML3Q96JK9 1138 aa20.09■□□□□ 0.81
CPSF1-207ENST00000531727 FSD1Q9BTV5 496 aa20.09■□□□□ 0.81
CPSF1-207ENST00000531727 ZNF214Q9UL59 606 aaPredicted RBP20.09■□□□□ 0.81
CPSF1-207ENST00000531727 MYH4Q9Y623 1939 aa20.09■□□□□ 0.81
CPSF1-207ENST00000531727 DNM1LO00429 736 aa20.08■□□□□ 0.81
CPSF1-207ENST00000531727 MX1P20591 662 aa20.08■□□□□ 0.81
CPSF1-207ENST00000531727 COPB2P35606 906 aa20.08■□□□□ 0.81
CPSF1-207ENST00000531727 STAT3P40763 770 aa20.08■□□□□ 0.81
CPSF1-207ENST00000531727 ZNF444Q8N0Y2 327 aaPredicted RBP20.08■□□□□ 0.81
CPSF1-207ENST00000531727 REPS2Q8NFH8 660 aa20.08■□□□□ 0.81
CPSF1-207ENST00000531727 SEC62Q99442 399 aaKnown RBP20.08■□□□□ 0.81
CPSF1-207ENST00000531727 MMP19Q99542 508 aa20.08■□□□□ 0.81
CPSF1-207ENST00000531727 NUP88Q99567 741 aaPredicted RBP20.08■□□□□ 0.81
CPSF1-207ENST00000531727 NACAP1Q9BZK3 213 aa20.08■□□□□ 0.81
CPSF1-207ENST00000531727 SENP6Q9GZR1 1112 aaPredicted RBP20.08■□□□□ 0.81
CPSF1-207ENST00000531727 SZT2Q5T011 3432 aa20.08■□□□□ 0.8
CPSF1-207ENST00000531727 SALL3Q9BXA9 1300 aa20.07■□□□□ 0.8
CPSF1-207ENST00000531727 F5H6K3 240 aa20.07■□□□□ 0.8
CPSF1-207ENST00000531727 SEPT4O43236 478 aa20.07■□□□□ 0.8
CPSF1-207ENST00000531727 PRDM1O75626 825 aa20.07■□□□□ 0.8
CPSF1-207ENST00000531727 NDUFB10O96000 172 aa20.07■□□□□ 0.8
CPSF1-207ENST00000531727 MAGEA10P43363 369 aaPredicted RBP20.07■□□□□ 0.8
CPSF1-207ENST00000531727 KLRC3Q07444 240 aa20.07■□□□□ 0.8
CPSF1-207ENST00000531727 ZMYM1Q5SVZ6 1142 aa20.07■□□□□ 0.8
CPSF1-207ENST00000531727 SLF1Q9BQI6 1058 aa20.07■□□□□ 0.8
CPSF1-207ENST00000531727 CLIP2Q9UDT6 1046 aa20.07■□□□□ 0.8
CPSF1-207ENST00000531727 PLXNA1Q9UIW2 1896 aa20.07■□□□□ 0.8
CPSF1-207ENST00000531727 KCTD2Q14681 263 aa20.06■□□□□ 0.8
CPSF1-207ENST00000531727 CEP95Q96GE4 821 aa20.06■□□□□ 0.8
CPSF1-207ENST00000531727 CRBNQ96SW2 442 aa20.06■□□□□ 0.8
CPSF1-207ENST00000531727 SOX1O00570 391 aaPredicted RBP20.05■□□□□ 0.8
CPSF1-207ENST00000531727 PDE4BQ07343 736 aa20.05■□□□□ 0.8
CPSF1-207ENST00000531727 PRAMEF19Q5SWL8 479 aa20.05■□□□□ 0.8
CPSF1-207ENST00000531727 ARRDC4Q8NCT1 418 aa20.05■□□□□ 0.8
CPSF1-207ENST00000531727 MKL1Q969V6 931 aa20.05■□□□□ 0.8
CPSF1-207ENST00000531727 TEX13BQ9BXU2 312 aa20.05■□□□□ 0.8
CPSF1-207ENST00000531727 NAPBQ9H115 298 aa20.05■□□□□ 0.8
CPSF1-207ENST00000531727 MTMR4Q9NYA4 1195 aa20.05■□□□□ 0.8
CPSF1-207ENST00000531727 SYNPO2Q9UMS6 1093 aa20.05■□□□□ 0.8
CPSF1-207ENST00000531727 PLIN4Q96Q06 1357 aa20.05■□□□□ 0.8
CPSF1-207ENST00000531727 DNAH12Q6ZR08 3092 aa20.04■□□□□ 0.8
CPSF1-207ENST00000531727 TTLL1O95922 423 aa20.04■□□□□ 0.8
CPSF1-207ENST00000531727 PGK2P07205 417 aa20.04■□□□□ 0.8
CPSF1-207ENST00000531727 ZNF792Q3KQV3 632 aa20.04■□□□□ 0.8
CPSF1-207ENST00000531727 GJC2Q5T442 439 aaPredicted RBP20.04■□□□□ 0.8
CPSF1-207ENST00000531727 ANKRD45Q5TZF3 282 aa20.04■□□□□ 0.8
CPSF1-207ENST00000531727 ANO1Q5XXA6 986 aa20.04■□□□□ 0.8
CPSF1-207ENST00000531727 PRPF38AQ8NAV1 312 aaKnown RBP20.04■□□□□ 0.8
CPSF1-207ENST00000531727 ZBTB47Q9UFB7 747 aaPredicted RBP20.04■□□□□ 0.8
CPSF1-207ENST00000531727 NRBP1Q9UHY1 535 aa20.04■□□□□ 0.8
CPSF1-207ENST00000531727 DIS3Q9Y2L1 958 aaKnown RBP20.04■□□□□ 0.8
CPSF1-207ENST00000531727 SLC3A2P08195 630 aaKnown RBP20.03■□□□□ 0.8
CPSF1-207ENST00000531727 TSPY3P0CV98 308 aa20.03■□□□□ 0.8
CPSF1-207ENST00000531727 TSPY8P0CW00 308 aa20.03■□□□□ 0.8
CPSF1-207ENST00000531727 PPARAQ07869 468 aa20.03■□□□□ 0.8
CPSF1-207ENST00000531727 SNRNP48Q6IEG0 339 aaKnown RBP20.03■□□□□ 0.8
CPSF1-207ENST00000531727 GMCL1P1Q8NEA9 526 aa20.03■□□□□ 0.8
CPSF1-207ENST00000531727 NEDD1Q8NHV4 660 aa20.03■□□□□ 0.8
CPSF1-207ENST00000531727 TINF2Q9BSI4 451 aa20.03■□□□□ 0.8
CPSF1-207ENST00000531727 KBTBD13C9JR72 458 aa20.02■□□□□ 0.8
CPSF1-207ENST00000531727 ATN1P54259 1190 aaPredicted RBP20.02■□□□□ 0.8
CPSF1-207ENST00000531727 HDAC1Q13547 482 aaPredicted RBP20.02■□□□□ 0.8
CPSF1-207ENST00000531727 TDHQ8IZJ6 230 aa20.02■□□□□ 0.8
CPSF1-207ENST00000531727 LRRC47Q8N1G4 583 aaKnown RBP20.02■□□□□ 0.8
CPSF1-207ENST00000531727 LRCH3Q96II8 777 aa20.02■□□□□ 0.8
CPSF1-207ENST00000531727 UBE2OQ9C0C9 1292 aaKnown RBP20.02■□□□□ 0.8
CPSF1-207ENST00000531727 ATP2A1O14983 1001 aa20.01■□□□□ 0.79
CPSF1-207ENST00000531727 FOXP2O15409 715 aa20.01■□□□□ 0.79
CPSF1-207ENST00000531727 ZBED4O75132 1171 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms