RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.66■□□□□ 0.1
SF3B2-212ENST00000531589 NAPBQ9H115 298 aa15.66■□□□□ 0.1
SF3B2-212ENST00000531589 EPB41L4AQ9HCS5 686 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-212ENST00000531589 SYNPO2Q9UMS6 1093 aa15.66■□□□□ 0.1
SF3B2-212ENST00000531589 ADAMTS5Q9UNA0 930 aa15.66■□□□□ 0.1
SF3B2-212ENST00000531589 F5H6K3 240 aa15.65■□□□□ 0.1
SF3B2-212ENST00000531589 CNGA1P29973 690 aa15.65■□□□□ 0.1
SF3B2-212ENST00000531589 KLRC3Q07444 240 aa15.65■□□□□ 0.1
SF3B2-212ENST00000531589 FAM83BQ5T0W9 1011 aa15.65■□□□□ 0.1
SF3B2-212ENST00000531589 TICAM2Q86XR7 235 aa15.65■□□□□ 0.1
SF3B2-212ENST00000531589 NPLOC4Q8TAT6 608 aa15.65■□□□□ 0.1
SF3B2-212ENST00000531589 EVI5LQ96CN4 794 aa15.65■□□□□ 0.1
SF3B2-212ENST00000531589 SEC62Q99442 399 aaKnown RBP15.65■□□□□ 0.1
SF3B2-212ENST00000531589 FLRT1Q9NZU1 646 aa15.65■□□□□ 0.1
SF3B2-212ENST00000531589 DDX20Q9UHI6 824 aaKnown RBP15.65■□□□□ 0.1
SF3B2-212ENST00000531589 PPP1R9AQ9ULJ8 1098 aa15.65■□□□□ 0.1
SF3B2-212ENST00000531589 CEP290O15078 2479 aa15.65■□□□□ 0.1
SF3B2-212ENST00000531589 VWA5AO00534 786 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 CYP2C19P33261 490 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 STAT3P40763 770 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 MNX1P50219 401 aaPredicted RBP15.64■□□□□ 0.09
SF3B2-212ENST00000531589 FXR1P51114 621 aaKnown RBP eCLIP15.64■□□□□ 0.098e-6■■■□□ 16.4
SF3B2-212ENST00000531589 KCTD2Q14681 263 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 TMEM132BQ14DG7 1078 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 PPP4R3BQ5MIZ7 849 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 RIOX2Q8IUF8 465 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 MKL1Q969V6 931 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 SLF1Q9BQI6 1058 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 FBXO28Q9NVF7 368 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 RBM27Q9P2N5 1060 aaKnown RBP15.64■□□□□ 0.09
SF3B2-212ENST00000531589 CLIP2Q9UDT6 1046 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 STAP2Q9UGK3 403 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 SALL3Q9BXA9 1300 aa15.64■□□□□ 0.09
SF3B2-212ENST00000531589 A0A1W2PPC1 479 aa15.63■□□□□ 0.09
SF3B2-212ENST00000531589 PRDM1O75626 825 aa15.63■□□□□ 0.09
SF3B2-212ENST00000531589 TTLL1O95922 423 aa15.63■□□□□ 0.09
SF3B2-212ENST00000531589 TSPY3P0CV98 308 aa15.63■□□□□ 0.09
SF3B2-212ENST00000531589 TSPY8P0CW00 308 aa15.63■□□□□ 0.09
SF3B2-212ENST00000531589 PDE1AP54750 535 aa15.63■□□□□ 0.09
SF3B2-212ENST00000531589 PPARAQ07869 468 aa15.63■□□□□ 0.09
SF3B2-212ENST00000531589 C7orf61Q8IZ16 206 aa15.63■□□□□ 0.09
SF3B2-212ENST00000531589 PRPF38AQ8NAV1 312 aaKnown RBP15.63■□□□□ 0.09
SF3B2-212ENST00000531589 RWDD1Q9H446 243 aaPredicted RBP15.63■□□□□ 0.09
SF3B2-212ENST00000531589 MTMR4Q9NYA4 1195 aa15.63■□□□□ 0.09
SF3B2-212ENST00000531589 CTDP1Q9Y5B0 961 aaPredicted RBP15.63■□□□□ 0.09
SF3B2-212ENST00000531589 A0A0G2JMZ2 1700 aa15.63■□□□□ 0.09
SF3B2-212ENST00000531589 IGKV6D-41A0A0C4DH26 115 aa15.62■□□□□ 0.09
SF3B2-212ENST00000531589 COBLO75128 1261 aa15.62■□□□□ 0.09
SF3B2-212ENST00000531589 COL6A1P12109 1028 aa15.62■□□□□ 0.09
SF3B2-212ENST00000531589 CYBAP13498 195 aa15.62■□□□□ 0.09
SF3B2-212ENST00000531589 ARRDC4Q8NCT1 418 aa15.62■□□□□ 0.09
SF3B2-212ENST00000531589 NEDD1Q8NHV4 660 aa15.62■□□□□ 0.09
SF3B2-212ENST00000531589 CEP95Q96GE4 821 aa15.62■□□□□ 0.09
SF3B2-212ENST00000531589 MMP19Q99542 508 aa15.62■□□□□ 0.09
SF3B2-212ENST00000531589 DIS3Q9Y2L1 958 aaKnown RBP15.62■□□□□ 0.09
SF3B2-212ENST00000531589 ZNF236Q9UL36 1845 aa15.61■□□□□ 0.09
SF3B2-212ENST00000531589 RLFQ13129 1914 aa15.61■□□□□ 0.09
SF3B2-212ENST00000531589 ZBED4O75132 1171 aa15.61■□□□□ 0.09
SF3B2-212ENST00000531589 NDUFB10O96000 172 aa15.61■□□□□ 0.09
SF3B2-212ENST00000531589 IGHA2P01877 340 aa15.61■□□□□ 0.09
SF3B2-212ENST00000531589 MAML3Q96JK9 1138 aa15.61■□□□□ 0.09
SF3B2-212ENST00000531589 TEX13BQ9BXU2 312 aa15.61■□□□□ 0.09
SF3B2-212ENST00000531589 PRO3102Q9H379 93 aa15.61■□□□□ 0.09
SF3B2-212ENST00000531589 HELLSQ9NRZ9 838 aa15.61■□□□□ 0.09
SF3B2-212ENST00000531589 NRBP1Q9UHY1 535 aa15.61■□□□□ 0.09
SF3B2-212ENST00000531589 ZNF214Q9UL59 606 aaPredicted RBP15.61■□□□□ 0.09
SF3B2-212ENST00000531589 DNM1LO00429 736 aa15.6■□□□□ 0.09
SF3B2-212ENST00000531589 SEPT4O43236 478 aa15.6■□□□□ 0.09
SF3B2-212ENST00000531589 FDX1P10109 184 aa15.6■□□□□ 0.09
SF3B2-212ENST00000531589 TFAP4Q01664 338 aa15.6■□□□□ 0.09
SF3B2-212ENST00000531589 GMCL1P1Q8NEA9 526 aa15.6■□□□□ 0.09
SF3B2-212ENST00000531589 NUP88Q99567 741 aaPredicted RBP15.6■□□□□ 0.09
SF3B2-212ENST00000531589 FEM1BQ9UK73 627 aa15.6■□□□□ 0.09
SF3B2-212ENST00000531589 PFASO15067 1338 aa15.6■□□□□ 0.09
SF3B2-212ENST00000531589 PLIN4Q96Q06 1357 aa15.6■□□□□ 0.09
SF3B2-212ENST00000531589 ATP2A1O14983 1001 aa15.59■□□□□ 0.09
SF3B2-212ENST00000531589 REPS2Q8NFH8 660 aa15.59■□□□□ 0.09
SF3B2-212ENST00000531589 SENP6Q9GZR1 1112 aaPredicted RBP15.59■□□□□ 0.09
SF3B2-212ENST00000531589 GREB1LQ9C091 1923 aaPredicted RBP15.58■□□□□ 0.09
SF3B2-212ENST00000531589 TSPY2A6NKD2 308 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 KBTBD13C9JR72 458 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 BMP3P12645 472 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 BMP8BP34820 402 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 OAZ1P54368 228 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 FAM47AQ5JRC9 791 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 SLFN13Q68D06 897 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 SNRNP48Q6IEG0 339 aaKnown RBP15.58■□□□□ 0.08
SF3B2-212ENST00000531589 CCDC129Q6ZRS4 1044 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 SMC5Q8IY18 1101 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 LRRC47Q8N1G4 583 aaKnown RBP15.58■□□□□ 0.08
SF3B2-212ENST00000531589 MSL3Q8N5Y2 521 aaKnown RBP15.58■□□□□ 0.08
SF3B2-212ENST00000531589 TRPV1Q8NER1 839 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 KIFC2Q96AC6 838 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 DDX11Q96FC9 970 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 TINF2Q9BSI4 451 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 LNPKQ9C0E8 428 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 FBXO40Q9UH90 709 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 ANAPC4Q9UJX5 808 aa15.58■□□□□ 0.08
SF3B2-212ENST00000531589 ZMYND8Q9ULU4 1186 aaPredicted RBP15.58■□□□□ 0.08
SF3B2-212ENST00000531589 TRIM6-TRIM34B2RNG4 842 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms