RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 BICD2Q8TD16 824 aa12.57□□□□□ -0.4
SRPRA-205ENST00000531104 RBSNQ9H1K0 784 aa12.57□□□□□ -0.4
SRPRA-205ENST00000531104 TMOD2Q9NZR1 351 aa12.57□□□□□ -0.4
SRPRA-205ENST00000531104 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
SRPRA-205ENST00000531104 STXBP3O00186 592 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 GOLGA8HP0CJ92 632 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 CMA1P23946 247 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 CALML3P27482 149 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 ME1P48163 572 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 RASSF7Q02833 373 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 FAM160A1Q05DH4 1040 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 ZNF543Q08ER8 600 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 RRP1BQ14684 758 aaKnown RBP12.56□□□□□ -0.4
SRPRA-205ENST00000531104 EARS2Q5JPH6 523 aaKnown RBP12.56□□□□□ -0.4
SRPRA-205ENST00000531104 WWC2Q6AWC2 1192 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 GALNT17Q6IS24 598 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 TYW1BQ6NUM6 668 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 TMEM179Q6ZVK1 233 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 ZSCAN29Q8IWY8 852 aaPredicted RBP12.56□□□□□ -0.4
SRPRA-205ENST00000531104 FMR1NBQ8N0W7 255 aaPredicted RBP12.56□□□□□ -0.4
SRPRA-205ENST00000531104 MRPS27Q92552 414 aaKnown RBP12.56□□□□□ -0.4
SRPRA-205ENST00000531104 DPF2Q92785 391 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 NUP62CLQ9H1M0 184 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 TSPY26PQ9H489 355 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 KANSL2Q9H9L4 492 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 BARHL2Q9NY43 387 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 PPP1R1BQ9UD71 204 aaPredicted RBP12.56□□□□□ -0.4
SRPRA-205ENST00000531104 SYNPO2Q9UMS6 1093 aa12.56□□□□□ -0.4
SRPRA-205ENST00000531104 MYH4Q9Y623 1939 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 CLRN2A0PK11 232 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 FAM196BA6NMK8 535 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 TCP10L2B9ZVM9 353 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 hCG_1984214I3L0E3 225 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 WNT10BO00744 389 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 ADAMTS3O15072 1205 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 CUTAO60888 179 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 JAG1P78504 1218 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 CLEC10AQ8IUN9 316 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 LRRC47Q8N1G4 583 aaKnown RBP12.55□□□□□ -0.4
SRPRA-205ENST00000531104 ZNF713Q8N859 430 aaPredicted RBP12.55□□□□□ -0.4
SRPRA-205ENST00000531104 JMYQ8N9B5 988 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 FSIP1Q8NA03 581 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 MTMR8Q96EF0 704 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 CSRNP1Q96S65 589 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 BRMS1Q9HCU9 246 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 MYOZ2Q9NPC6 264 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 PCDHA4Q9UN74 947 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 HPSEQ9Y251 543 aa12.55□□□□□ -0.4
SRPRA-205ENST00000531104 ESYT2A0FGR8 921 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 SHTN1A0MZ66 631 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 EEF2P13639 858 aaKnown RBP12.54□□□□□ -0.4
SRPRA-205ENST00000531104 PTPREP23469 700 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 TRAPPC10P48553 1259 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 NLRP5P59047 1200 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 SEPT2Q15019 361 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 MAP3K11Q16584 847 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 ABCB5Q2M3G0 1257 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 SHROOM1Q2M3G4 852 aaPredicted RBP12.54□□□□□ -0.4
SRPRA-205ENST00000531104 GPATCH4Q5T3I0 446 aaKnown RBP12.54□□□□□ -0.4
SRPRA-205ENST00000531104 CCDC73Q6ZRK6 1079 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 BLIDQ8IZY5 108 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 ZNF579Q8NAF0 562 aaKnown RBP12.54□□□□□ -0.4
SRPRA-205ENST00000531104 GMCL1P1Q8NEA9 526 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 DCAF4Q8WV16 495 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 GPKOWQ92917 476 aaPredicted RBP eCLIP12.54□□□□□ -0.4
SRPRA-205ENST00000531104 RRP36Q96EU6 259 aaKnown RBP12.54□□□□□ -0.4
SRPRA-205ENST00000531104 TRIM34Q9BYJ4 488 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 ZMYND12Q9H0C1 365 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 SPON1Q9HCB6 807 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 CABP5Q9NP86 173 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 FBXO2Q9UK22 296 aaPredicted RBP12.54□□□□□ -0.4
SRPRA-205ENST00000531104 PCDHB6Q9Y5E3 794 aa12.54□□□□□ -0.4
SRPRA-205ENST00000531104 TRIM75PA6NK02 468 aa12.53□□□□□ -0.4
SRPRA-205ENST00000531104 MPHOSPH10O00566 681 aaKnown RBP12.53□□□□□ -0.4
SRPRA-205ENST00000531104 CTAGE5O15320 804 aa12.53□□□□□ -0.4
SRPRA-205ENST00000531104 BMP15O95972 392 aa12.53□□□□□ -0.4
SRPRA-205ENST00000531104 MARCKSP29966 332 aaPredicted RBP12.53□□□□□ -0.4
SRPRA-205ENST00000531104 NDUFA8P51970 172 aa12.53□□□□□ -0.4
SRPRA-205ENST00000531104 EIF6P56537 245 aaKnown RBP12.53□□□□□ -0.4
SRPRA-205ENST00000531104 NBPF9Q3BBW0 867 aa12.53□□□□□ -0.4
SRPRA-205ENST00000531104 TPRNQ4KMQ1 711 aa12.53□□□□□ -0.4
SRPRA-205ENST00000531104 NOM1Q5C9Z4 860 aaKnown RBP12.53□□□□□ -0.4
SRPRA-205ENST00000531104 RBM26Q5T8P6 1007 aaKnown RBP12.53□□□□□ -0.4
SRPRA-205ENST00000531104 RESP18Q5W5W9 173 aa12.53□□□□□ -0.4
SRPRA-205ENST00000531104 SHC4Q6S5L8 630 aa12.53□□□□□ -0.4
SRPRA-205ENST00000531104 TNMDQ9H2S6 317 aa12.53□□□□□ -0.4
SRPRA-205ENST00000531104 CPVLQ9H3G5 476 aa12.53□□□□□ -0.4
SRPRA-205ENST00000531104 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
SRPRA-205ENST00000531104 SRPRBQ9Y5M8 271 aaKnown RBP12.53□□□□□ -0.4
SRPRA-205ENST00000531104 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
SRPRA-205ENST00000531104 DICER1Q9UPY3 1922 aaKnown RBP12.52□□□□□ -0.4
SRPRA-205ENST00000531104 WNT7AO00755 349 aa12.52□□□□□ -0.41
SRPRA-205ENST00000531104 MYO1BO43795 1136 aa12.52□□□□□ -0.41
SRPRA-205ENST00000531104 GMPSP49915 693 aaPredicted RBP12.52□□□□□ -0.41
SRPRA-205ENST00000531104 ICA1Q05084 483 aa12.52□□□□□ -0.41
SRPRA-205ENST00000531104 KRI1Q8N9T8 703 aaKnown RBP12.52□□□□□ -0.41
SRPRA-205ENST00000531104 PIBF1Q8WXW3 757 aa12.52□□□□□ -0.41
SRPRA-205ENST00000531104 GMCL1Q96IK5 515 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms