RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 SLC12A7Q9Y666 1083 aa19.8■□□□□ 0.76
SF3B2-211ENST00000531041 USP17L15C9J2P7 530 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 USP17L13C9JLJ4 530 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 USP17L11C9JVI0 530 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 USP17L18D6R9N7 530 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 USP17L22D6RA61 530 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 USP17L17D6RBQ6 530 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 USP17L19D6RCP7 530 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 USP17L20D6RJB6 530 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 IGF2BP3O00425 579 aaKnown RBP eCLIP19.79■□□□□ 0.76
SF3B2-211ENST00000531041 DDAH1O94760 285 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 BMP3P12645 472 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 SLC1A4P43007 532 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 USP17L24Q0WX57 530 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 ANKRD1Q15327 319 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 FAM83BQ5T0W9 1011 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 OTUD7BQ6GQQ9 843 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 CATSPERGQ6ZRH7 1159 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 FAM43AQ8N2R8 423 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 NUP88Q99567 741 aaPredicted RBP19.79■□□□□ 0.76
SF3B2-211ENST00000531041 BRPF3Q9ULD4 1205 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 MTMR7Q9Y216 660 aa19.79■□□□□ 0.76
SF3B2-211ENST00000531041 PDHXO00330 501 aa19.78■□□□□ 0.76
SF3B2-211ENST00000531041 CALM1P0DP23 149 aa19.78■□□□□ 0.76
SF3B2-211ENST00000531041 CALM2P0DP24 149 aa19.78■□□□□ 0.76
SF3B2-211ENST00000531041 CALM3P0DP25 149 aa19.78■□□□□ 0.76
SF3B2-211ENST00000531041 APOBRQ0VD83 1088 aa19.78■□□□□ 0.76
SF3B2-211ENST00000531041 SYNE3Q6ZMZ3 975 aa19.78■□□□□ 0.76
SF3B2-211ENST00000531041 A0A0G2JMZ2 1700 aa19.77■□□□□ 0.76
SF3B2-211ENST00000531041 KLF18A0A0U1RQI7 1052 aa19.77■□□□□ 0.76
SF3B2-211ENST00000531041 RCAN1P53805 252 aa19.77■□□□□ 0.76
SF3B2-211ENST00000531041 AK2P54819 239 aa19.77■□□□□ 0.76
SF3B2-211ENST00000531041 ZNF543Q08ER8 600 aa19.77■□□□□ 0.76
SF3B2-211ENST00000531041 ASPRV1Q53RT3 343 aa19.77■□□□□ 0.76
SF3B2-211ENST00000531041 GPATCH4Q5T3I0 446 aaKnown RBP19.77■□□□□ 0.76
SF3B2-211ENST00000531041 RASGRP2Q7LDG7 609 aa19.77■□□□□ 0.76
SF3B2-211ENST00000531041 TANGO6Q9C0B7 1094 aa19.77■□□□□ 0.76
SF3B2-211ENST00000531041 BAZ2BQ9UIF8 2168 aaKnown RBP19.77■□□□□ 0.76
SF3B2-211ENST00000531041 PLA2G6O60733 806 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 ALDH1A1P00352 501 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 PARP1P09874 1014 aaKnown RBP19.76■□□□□ 0.75
SF3B2-211ENST00000531041 GRM4Q14833 912 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 KCTD1Q719H9 257 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 CHMP4CQ96CF2 233 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 MYL10Q9BUA6 226 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 ASCC2Q9H1I8 757 aaPredicted RBP19.76■□□□□ 0.75
SF3B2-211ENST00000531041 PNMA3Q9UL41 463 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 PALM3A6NDB9 673 aaPredicted RBP19.76■□□□□ 0.75
SF3B2-211ENST00000531041 ZBTB43O43298 467 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 OSBPP22059 807 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 COG2Q14746 738 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 CCDC96Q2M329 555 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 NUP133Q8WUM0 1156 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 ZNF274Q96GC6 653 aaPredicted RBP19.76■□□□□ 0.75
SF3B2-211ENST00000531041 MAD2L2Q9UI95 211 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 FEM1BQ9UK73 627 aa19.76■□□□□ 0.75
SF3B2-211ENST00000531041 CEP350Q5VT06 3117 aa19.75■□□□□ 0.75
SF3B2-211ENST00000531041 MYPNQ86TC9 1320 aa19.75■□□□□ 0.75
SF3B2-211ENST00000531041 TMEM232C9JQI7 657 aa19.75■□□□□ 0.75
SF3B2-211ENST00000531041 ST18O60284 1047 aa19.75■□□□□ 0.75
SF3B2-211ENST00000531041 STAT2P52630 851 aa19.75■□□□□ 0.75
SF3B2-211ENST00000531041 IRX3P78415 501 aaPredicted RBP19.75■□□□□ 0.75
SF3B2-211ENST00000531041 BTNL9Q6UXG8 535 aa19.75■□□□□ 0.75
SF3B2-211ENST00000531041 FAM160B2Q86V87 743 aa19.75■□□□□ 0.75
SF3B2-211ENST00000531041 MICU3Q86XE3 530 aa19.75■□□□□ 0.75
SF3B2-211ENST00000531041 FANCBQ8NB91 859 aa19.75■□□□□ 0.75
SF3B2-211ENST00000531041 CTCFLQ8NI51 663 aaPredicted RBP19.75■□□□□ 0.75
SF3B2-211ENST00000531041 CHURC1Q8WUH1 139 aa19.75■□□□□ 0.75
SF3B2-211ENST00000531041 NID2Q14112 1375 aa19.75■□□□□ 0.75
SF3B2-211ENST00000531041 FRMPD2Q68DX3 1309 aaPredicted RBP19.74■□□□□ 0.75
SF3B2-211ENST00000531041 FLOT1O75955 427 aa19.74■□□□□ 0.75
SF3B2-211ENST00000531041 RXRAP19793 462 aa19.74■□□□□ 0.75
SF3B2-211ENST00000531041 PDIA3P30101 505 aaKnown RBP19.74■□□□□ 0.75
SF3B2-211ENST00000531041 KIF5BP33176 963 aa19.74■□□□□ 0.75
SF3B2-211ENST00000531041 PPP2R5BQ15173 497 aa19.74■□□□□ 0.75
SF3B2-211ENST00000531041 STAG2Q8N3U4 1231 aa19.74■□□□□ 0.75
SF3B2-211ENST00000531041 PRPF38AQ8NAV1 312 aaKnown RBP19.74■□□□□ 0.75
SF3B2-211ENST00000531041 PARK7Q99497 189 aaKnown RBP19.74■□□□□ 0.75
SF3B2-211ENST00000531041 LARP6Q9BRS8 491 aaKnown RBP19.74■□□□□ 0.75
SF3B2-211ENST00000531041 GPCPD1Q9NPB8 672 aa19.74■□□□□ 0.75
SF3B2-211ENST00000531041 FBXO28Q9NVF7 368 aa19.74■□□□□ 0.75
SF3B2-211ENST00000531041 HOXC10Q9NYD6 342 aa19.74■□□□□ 0.75
SF3B2-211ENST00000531041 HPS5Q9UPZ3 1129 aa19.74■□□□□ 0.75
SF3B2-211ENST00000531041 GOLGA8BA8MQT2 603 aa19.73■□□□□ 0.75
SF3B2-211ENST00000531041 GOLGA8HP0CJ92 632 aa19.73■□□□□ 0.75
SF3B2-211ENST00000531041 DSG3P32926 999 aa19.73■□□□□ 0.75
SF3B2-211ENST00000531041 MAP2K1Q02750 393 aaPredicted RBP19.73■□□□□ 0.75
SF3B2-211ENST00000531041 TAF1CQ15572 869 aaPredicted RBP19.73■□□□□ 0.75
SF3B2-211ENST00000531041 TTBK2Q6IQ55 1244 aa19.73■□□□□ 0.75
SF3B2-211ENST00000531041 LBX2Q6XYB7 198 aa19.73■□□□□ 0.75
SF3B2-211ENST00000531041 P2RX7Q99572 595 aaKnown RBP19.73■□□□□ 0.75
SF3B2-211ENST00000531041 SLF1Q9BQI6 1058 aa19.73■□□□□ 0.75
SF3B2-211ENST00000531041 PPP1R9AQ9ULJ8 1098 aa19.73■□□□□ 0.75
SF3B2-211ENST00000531041 TPCN1Q9ULQ1 816 aa19.73■□□□□ 0.75
SF3B2-211ENST00000531041 ISY1Q9ULR0 285 aaKnown RBP19.73■□□□□ 0.75
SF3B2-211ENST00000531041 NAP1L2Q9ULW6 460 aaPredicted RBP19.73■□□□□ 0.75
SF3B2-211ENST00000531041 ADAMTS5Q9UNA0 930 aa19.73■□□□□ 0.75
SF3B2-211ENST00000531041 SMCHD1A6NHR9 2005 aa19.72■□□□□ 0.75
SF3B2-211ENST00000531041 KLRF2D3W0D1 207 aa19.72■□□□□ 0.75
SF3B2-211ENST00000531041 CA12O43570 354 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms