RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 SLC1A4P43007 532 aa12.4□□□□□ -0.42
SOX6-213ENST00000530378 HMGCS2P54868 508 aa12.4□□□□□ -0.42
SOX6-213ENST00000530378 FAM83BQ5T0W9 1011 aa12.4□□□□□ -0.42
SOX6-213ENST00000530378 C2orf69Q8N8R5 385 aa12.4□□□□□ -0.42
SOX6-213ENST00000530378 ZNF280CQ8ND82 737 aa12.4□□□□□ -0.42
SOX6-213ENST00000530378 SMC1BQ8NDV3 1235 aa12.4□□□□□ -0.42
SOX6-213ENST00000530378 NSUN7Q8NE18 718 aaKnown RBP12.4□□□□□ -0.42
SOX6-213ENST00000530378 UBA5Q9GZZ9 404 aa12.4□□□□□ -0.42
SOX6-213ENST00000530378 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
SOX6-213ENST00000530378 SMC3Q9UQE7 1217 aa12.4□□□□□ -0.42
SOX6-213ENST00000530378 TMX2Q9Y320 296 aa12.4□□□□□ -0.42
SOX6-213ENST00000530378 CALM1P0DP23 149 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 CALM2P0DP24 149 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 CALM3P0DP25 149 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 GJB2P29033 226 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 HUNKP57058 714 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 IKQ13123 557 aaPredicted RBP12.39□□□□□ -0.43
SOX6-213ENST00000530378 SLC35G1Q2M3R5 365 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 PPP4R3BQ5MIZ7 849 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 TMTC3Q6ZXV5 915 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 MKL1Q969V6 931 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 OPTNQ96CV9 577 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 SLC26A6Q9BXS9 759 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 SH2D4AQ9H788 454 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 AS3MTQ9HBK9 375 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 VAT1LQ9HCJ6 419 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 NID2Q14112 1375 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 PASKQ96RG2 1323 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 USP17L10C9JJH3 530 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 GJA5P36382 358 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 SNAP25P60880 206 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 MAP3K11Q16584 847 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 TNS4Q8IZW8 715 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 SRBD1Q8N5C6 995 aaKnown RBP12.39□□□□□ -0.43
SOX6-213ENST00000530378 GMCL1P1Q8NEA9 526 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 AIFM3Q96NN9 605 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 VCPKMTQ9H867 229 aa12.39□□□□□ -0.43
SOX6-213ENST00000530378 CNTNAP5Q8WYK1 1306 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 PARP14Q460N5 1801 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 KLRF2D3W0D1 207 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 IRF6O14896 467 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 TOMM70O94826 608 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 KIF5BP33176 963 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 BACE1P56817 501 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 ZNF543Q08ER8 600 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 NTRK3Q16288 839 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 LDLRAD1Q5T700 205 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 HOMER1Q86YM7 354 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 IL27Q8NEV9 243 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 TANGO6Q9C0B7 1094 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 EMILIN3Q9NT22 766 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 GINM1Q9NU53 330 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 RBM28Q9NW13 759 aaKnown RBP12.38□□□□□ -0.43
SOX6-213ENST00000530378 AFG3L2Q9Y4W6 797 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 LOC285556D6RIA3 1793 aa12.38□□□□□ -0.43
SOX6-213ENST00000530378 PALM3A6NDB9 673 aaPredicted RBP12.37□□□□□ -0.43
SOX6-213ENST00000530378 SPDYE5A6NIY4 337 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 TMEM232C9JQI7 657 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 SNHG28P0DPA3 235 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 BMP3P12645 472 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 TAL1P17542 331 aaPredicted RBP12.37□□□□□ -0.43
SOX6-213ENST00000530378 VCAM1P19320 739 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 RCAN1P53805 252 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 GRM1Q13255 1194 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 FOXD4L5Q5VV16 416 aaPredicted RBP12.37□□□□□ -0.43
SOX6-213ENST00000530378 GADL1Q6ZQY3 521 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 ERO1BQ86YB8 467 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 RBM46Q8TBY0 533 aaKnown RBP12.37□□□□□ -0.43
SOX6-213ENST00000530378 DCAF4Q8WV16 495 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 FOXD4L4Q8WXT5 416 aaPredicted RBP12.37□□□□□ -0.43
SOX6-213ENST00000530378 WDR18Q9BV38 432 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 GJB4Q9NTQ9 266 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 FBXO28Q9NVF7 368 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.37□□□□□ -0.43
SOX6-213ENST00000530378 CCDC196A0A1B0GTZ2 297 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 CYTH3O43739 400 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 ASPRV1Q53RT3 343 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 CPLX2Q6PUV4 134 aaKnown RBP12.37□□□□□ -0.43
SOX6-213ENST00000530378 KIAA1683Q9H0B3 1180 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 ORC3Q9UBD5 711 aaPredicted RBP12.37□□□□□ -0.43
SOX6-213ENST00000530378 ABT1Q9ULW3 272 aaKnown RBP12.37□□□□□ -0.43
SOX6-213ENST00000530378 SMCHD1A6NHR9 2005 aa12.37□□□□□ -0.43
SOX6-213ENST00000530378 COL11A1P12107 1806 aaPredicted RBP12.36□□□□□ -0.43
SOX6-213ENST00000530378 CDKL5O76039 1030 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 FDPSP14324 419 aaKnown RBP12.36□□□□□ -0.43
SOX6-213ENST00000530378 IFNAR1P17181 557 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 FKBP1BP68106 108 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 GUCY1B3Q02153 619 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 SSRP1Q08945 709 aaKnown RBP12.36□□□□□ -0.43
SOX6-213ENST00000530378 FUT2Q10981 343 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 PKP1Q13835 747 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 TREML2Q5T2D2 321 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 OTUD7BQ6GQQ9 843 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
SOX6-213ENST00000530378 FAM184AQ8NB25 1140 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 SMARCC2Q8TAQ2 1214 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 GPKOWQ92917 476 aaPredicted RBP eCLIP12.36□□□□□ -0.43
SOX6-213ENST00000530378 KIFC2Q96AC6 838 aa12.36□□□□□ -0.43
SOX6-213ENST00000530378 INTS4Q96HW7 963 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms