RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 ZNFX1Q9P2E3 1918 aaKnown RBP10.4□□□□□ -0.74
TGFBR3-208ENST00000529608 CDH23Q9H251 3354 aa10.4□□□□□ -0.75
TGFBR3-208ENST00000529608 MYH8P13535 1937 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 SLC15A5A6NIM6 579 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 SURF6O75683 361 aaKnown RBP10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 IDH1O75874 414 aaKnown RBP10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 HLA-DOAP06340 250 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 HOXC6P09630 235 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 CYBAP13498 195 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 CNGA1P29973 690 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 RTP1P59025 263 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 C9orf50Q5SZB4 431 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 GJC2Q5T442 439 aaPredicted RBP10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 LBX2Q6XYB7 198 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 CCAR1Q8IX12 1150 aaKnown RBP10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 MAGEB6Q8N7X4 407 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 LPAR1Q92633 364 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 RIOK1Q9BRS2 568 aaKnown RBP10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 EHD4Q9H223 541 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 RPAP3Q9H6T3 665 aaPredicted RBP10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 SERPINB13Q9UIV8 391 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 LHX6Q9UPM6 363 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 VCANP13611 3396 aa10.39□□□□□ -0.75
TGFBR3-208ENST00000529608 SMIM22K7EJ46 135 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 DNM1LO00429 736 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 COBLO75128 1261 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 USP5P45974 858 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 SEPT2Q15019 361 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 SHHQ15465 462 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 ABCB5Q2M3G0 1257 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 CERKLQ49MI3 558 aaPredicted RBP10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 PRAMEF19Q5SWL8 479 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 MFSD14CQ5VZR4 134 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 FAM109BQ6ICB4 259 aaPredicted RBP10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 SH3RF1Q7Z6J0 888 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 GTF3C2Q8WUA4 911 aaPredicted RBP10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 FEZ1Q99689 392 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 MOV10L1Q9BXT6 1211 aaKnown RBP10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 NOP58Q9Y2X3 529 aaKnown RBP10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 RBM19Q9Y4C8 960 aaKnown RBP10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 PLXNA1Q9UIW2 1896 aa10.38□□□□□ -0.75
TGFBR3-208ENST00000529608 BAZ2AQ9UIF9 1905 aaKnown RBP10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 SMCHD1A6NHR9 2005 aa10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 RLBP1P12271 317 aa10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 ITGB8P26012 769 aa10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 ATP2B2Q01814 1243 aa10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 GABPAQ06546 454 aa10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 OS9Q13438 667 aaPredicted RBP10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 SLC39A5Q6ZMH5 540 aa10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 CLEC10AQ8IUN9 316 aa10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 SIAH1Q8IUQ4 282 aa10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 CWC22Q9HCG8 908 aaKnown RBP10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 ATP11BQ9Y2G3 1177 aa10.37□□□□□ -0.75
TGFBR3-208ENST00000529608 TRIM43BA6NCK2 446 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 IPO8O15397 1037 aaKnown RBP10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 CYP2D6P10635 497 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 ADORA2AP29274 412 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 USP14P54578 494 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 CCNA1P78396 465 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 TRIM60Q495X7 471 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 SLFNL1Q499Z3 407 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 SLC44A5Q8NCS7 719 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 BADQ92934 168 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 TRIM43Q96BQ3 446 aaPredicted RBP10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 CRBNQ96SW2 442 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 CDX2Q99626 313 aaPredicted RBP10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 LBHD1Q9BQE6 289 aaPredicted RBP10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 KRTAP3-3Q9BYR6 98 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 KRTAP3-2Q9BYR7 98 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 TTYH1Q9H313 450 aaPredicted RBP10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 CUL9Q8IWT3 2517 aa10.36□□□□□ -0.75
TGFBR3-208ENST00000529608 GLRX3O76003 335 aaKnown RBP10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 ERCC3P19447 782 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 ADCYAP1R1P41586 468 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 EPHB4P54760 987 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 AAMPQ13685 434 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 SNX17Q15036 470 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 TTC6Q86TZ1 520 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 ZNF687Q8N1G0 1237 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 SDR42E1Q8WUS8 393 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 FERMT2Q96AC1 680 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 DYNLL2Q96FJ2 89 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 SPATC1LQ9H0A9 340 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 SEMA6BQ9H3T3 888 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 PDLIM7Q9NR12 457 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 IVNS1ABPQ9Y6Y0 642 aa10.35□□□□□ -0.75
TGFBR3-208ENST00000529608 TCRBV5S4A2TA0A5A2 114 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 MSCO60682 206 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 IGSF3O75054 1194 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 CHGBP05060 677 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 COG2Q14746 738 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 FAM47AQ5JRC9 791 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 ZNF697Q5TEC3 545 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 ZKSCAN2Q63HK3 967 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 OLFML2BQ68BL8 750 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 DPP9Q86TI2 863 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 LCORLQ8N3X6 602 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 MYLIPQ8WY64 445 aa10.34□□□□□ -0.75
TGFBR3-208ENST00000529608 ATG4CQ96DT6 458 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms