RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PRR16Q569H4 304 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 TEX35Q5T0J7 233 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 GADL1Q6ZQY3 521 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 MB21D2Q8IYB1 491 aaPredicted RBP16.91■□□□□ 0.3
USP47-207ENST00000527733 TBC1D5Q92609 795 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 SERTAD1Q9UHV2 236 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 PCDHA4Q9UN74 947 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 NEDD4P46934 1319 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 CYLC1P35663 651 aaPredicted RBP16.91■□□□□ 0.3
USP47-207ENST00000527733 SMTNP53814 917 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 SLC39A14Q15043 492 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 CTR9Q6PD62 1173 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 A0A0G2JLW4 131 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 ASNSP08243 561 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 CASQ1P31415 396 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 NLRP12P59046 1061 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 UBXN1Q04323 297 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 GNPTABQ3T906 1256 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 BRDTQ58F21 947 aaPredicted RBP16.9■□□□□ 0.3
USP47-207ENST00000527733 FBXO33Q7Z6M2 555 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 PIGSQ96S52 555 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 RBSNQ9H1K0 784 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 SLC16A2P36021 539 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 STAMQ92783 540 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.9■□□□□ 0.3
USP47-207ENST00000527733 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.9■□□□□ 0.32e-6■■■■■ 96.1
USP47-207ENST00000527733 MAPK8IP1Q9UQF2 711 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 ERLIN1O75477 346 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 R3HDM1Q15032 1099 aaKnown RBP16.9■□□□□ 0.3
USP47-207ENST00000527733 MTERF4Q7Z6M4 381 aaKnown RBP16.9■□□□□ 0.3
USP47-207ENST00000527733 SPON1Q9HCB6 807 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 CLIC4Q9Y696 253 aa16.9■□□□□ 0.3
USP47-207ENST00000527733 MMP1P03956 469 aa16.89■□□□□ 0.3
USP47-207ENST00000527733 INCENPQ9NQS7 918 aa16.89■□□□□ 0.3
USP47-207ENST00000527733 SLFN12Q8IYM2 578 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 IMPG2Q9BZV3 1241 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 POLR3EQ9NVU0 708 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 CTNND2Q9UQB3 1225 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 KDM3AQ9Y4C1 1321 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 PSDA5PKW4 1024 aaPredicted RBP16.89■□□□□ 0.29
USP47-207ENST00000527733 TECP42680 631 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 STRIP1Q5VSL9 837 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 ARHGEF16Q5VV41 709 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 CYB5R4Q7L1T6 521 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 DYMQ7RTS9 669 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 A0A1W2PQ27 194 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 A0A1W2PQ64 194 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 A0A1W2PQD8 194 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 NR1I2O75469 434 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 GH2P01242 217 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 ALS2CR12Q96Q35 445 aa16.89■□□□□ 0.29
USP47-207ENST00000527733 STAT2P52630 851 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 PAK1Q13153 545 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 SNW1Q13573 536 aaKnown RBP16.88■□□□□ 0.29
USP47-207ENST00000527733 STYK1Q6J9G0 422 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 COL23A1Q86Y22 540 aaPredicted RBP16.88■□□□□ 0.29
USP47-207ENST00000527733 ANKRD35Q8N283 1001 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 SLC44A5Q8NCS7 719 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 KIAA1468Q9P260 1216 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 DDX25Q9UHL0 483 aaKnown RBP16.88■□□□□ 0.29
USP47-207ENST00000527733 KNDC1Q76NI1 1749 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 CAMTA1Q9Y6Y1 1673 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 CSGALNACT2Q8N6G5 542 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 IFT74Q96LB3 600 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 AZI2Q9H6S1 392 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 TESPA1A2RU30 521 aaPredicted RBP16.88■□□□□ 0.29
USP47-207ENST00000527733 CCDC169A6NNP5 214 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 RGL2O15211 777 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 RCAN1P53805 252 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 NEK11Q8NG66 645 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 CHAMP1Q96JM3 812 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 ZNF830Q96NB3 372 aaPredicted RBP16.88■□□□□ 0.29
USP47-207ENST00000527733 PUF60Q9UHX1 559 aaKnown RBP16.88■□□□□ 0.29
USP47-207ENST00000527733 ZNF609O15014 1411 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 TBC1D10BQ4KMP7 808 aaPredicted RBP16.88■□□□□ 0.29
USP47-207ENST00000527733 DEFB132Q7Z7B7 95 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 TMEM47Q9BQJ4 181 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 CBX8Q9HC52 389 aa16.88■□□□□ 0.29
USP47-207ENST00000527733 CETN3O15182 167 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 LONP1P36776 959 aaKnown RBP16.87■□□□□ 0.29
USP47-207ENST00000527733 PAFAH1B1P43034 410 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 NOP2P46087 812 aaKnown RBP16.87■□□□□ 0.29
USP47-207ENST00000527733 TMTC3Q6ZXV5 915 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 ENAHQ8N8S7 591 aaPredicted RBP16.87■□□□□ 0.29
USP47-207ENST00000527733 ZNRF3Q9ULT6 936 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 FRMD4BQ9Y2L6 1034 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 NR5A1Q13285 461 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 PAF1Q8N7H5 531 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 CLIC6Q96NY7 704 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 SYNRGQ9UMZ2 1314 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 SYDE2Q5VT97 1194 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 KRT26Q7Z3Y9 468 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 TPH2Q8IWU9 490 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 RASGRP4Q8TDF6 673 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 LUC7L2Q9Y383 392 aaKnown RBP16.87■□□□□ 0.29
USP47-207ENST00000527733 NFE2L3Q9Y4A8 694 aa16.87■□□□□ 0.29
USP47-207ENST00000527733 LAD1O00515 517 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 ORC4O43929 436 aa16.86■□□□□ 0.29
USP47-207ENST00000527733 PPP6R2O75170 966 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms