RNA–Protein interactions for RNA: ENST00000527525.5

SIPA1-203, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2 BASIC

Gene SIPA1, Length 3,235 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-203ENST00000527525 SSRP1Q08945 709 aaKnown RBP17■□□□□ 0.31
SIPA1-203ENST00000527525 IKQ13123 557 aaPredicted RBP17■□□□□ 0.31
SIPA1-203ENST00000527525 CTCFLQ8NI51 663 aaPredicted RBP17■□□□□ 0.31
SIPA1-203ENST00000527525 SGIP1Q9BQI5 828 aa17■□□□□ 0.31
SIPA1-203ENST00000527525 ZSWIM4Q9H7M6 989 aa17■□□□□ 0.31
SIPA1-203ENST00000527525 FAM217BQ9NTX9 383 aaPredicted RBP17■□□□□ 0.31
SIPA1-203ENST00000527525 TMEM51Q9NW97 253 aa17■□□□□ 0.31
SIPA1-203ENST00000527525 PDS5AQ29RF7 1337 aaKnown RBP17■□□□□ 0.31
SIPA1-203ENST00000527525 SEC31AO94979 1220 aaKnown RBP17■□□□□ 0.31
SIPA1-203ENST00000527525 SLU7O95391 586 aaKnown RBP17■□□□□ 0.31
SIPA1-203ENST00000527525 MICALL2Q8IY33 904 aa17■□□□□ 0.31
SIPA1-203ENST00000527525 NEK11Q8NG66 645 aa17■□□□□ 0.31
SIPA1-203ENST00000527525 UIMC1Q96RL1 719 aa17■□□□□ 0.31
SIPA1-203ENST00000527525 SCN9AQ15858 1988 aa17■□□□□ 0.31
SIPA1-203ENST00000527525 GAKO14976 1311 aa16.99■□□□□ 0.31
SIPA1-203ENST00000527525 SLC16A2P36021 539 aa16.99■□□□□ 0.31
SIPA1-203ENST00000527525 CCDC34Q96HJ3 373 aa16.99■□□□□ 0.31
SIPA1-203ENST00000527525 ZCCHC17Q9NP64 241 aaKnown RBP16.99■□□□□ 0.31
SIPA1-203ENST00000527525 DDNO94850 711 aaPredicted RBP16.99■□□□□ 0.31
SIPA1-203ENST00000527525 STX1AQ16623 288 aa16.99■□□□□ 0.31
SIPA1-203ENST00000527525 SH3BP5LQ7L8J4 393 aa16.99■□□□□ 0.31
SIPA1-203ENST00000527525 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
SIPA1-203ENST00000527525 URI1O94763 535 aaPredicted RBP16.98■□□□□ 0.31
SIPA1-203ENST00000527525 GYS2P54840 703 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 IRX5P78411 483 aaPredicted RBP16.98■□□□□ 0.31
SIPA1-203ENST00000527525 TRIM29Q14134 588 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 IQCB1Q15051 598 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 CCDC96Q2M329 555 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 NUP88Q99567 741 aaPredicted RBP16.98■□□□□ 0.31
SIPA1-203ENST00000527525 TMEM47Q9BQJ4 181 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 AGXT2Q9BYV1 514 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
SIPA1-203ENST00000527525 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 ZNF541Q9H0D2 1346 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 SEC23AQ15436 765 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 TRIM22Q8IYM9 498 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 CEP57L1Q8IYX8 460 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 ZDHHC15Q96MV8 337 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 PSMD1Q99460 953 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 ZNF446Q9NWS9 450 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 CNOT7Q9UIV1 285 aaKnown RBP16.98■□□□□ 0.31
SIPA1-203ENST00000527525 CD2APQ9Y5K6 639 aa16.98■□□□□ 0.31
SIPA1-203ENST00000527525 COL4A5P29400 1685 aa16.97■□□□□ 0.31
SIPA1-203ENST00000527525 TAL1P17542 331 aaPredicted RBP16.97■□□□□ 0.31
SIPA1-203ENST00000527525 KCTD1Q719H9 257 aa16.97■□□□□ 0.31
SIPA1-203ENST00000527525 XPO4Q9C0E2 1151 aaKnown RBP16.97■□□□□ 0.31
SIPA1-203ENST00000527525 CFAP45Q9UL16 551 aa16.97■□□□□ 0.31
SIPA1-203ENST00000527525 MORC2Q9Y6X9 1032 aaPredicted RBP16.97■□□□□ 0.31
SIPA1-203ENST00000527525 ARAP2Q8WZ64 1704 aa16.97■□□□□ 0.31
SIPA1-203ENST00000527525 GABPB1Q06547 395 aaPredicted RBP16.97■□□□□ 0.31
SIPA1-203ENST00000527525 NR5A1Q13285 461 aa16.97■□□□□ 0.31
SIPA1-203ENST00000527525 SEPT2Q15019 361 aa16.97■□□□□ 0.31
SIPA1-203ENST00000527525 SKIDA1Q1XH10 827 aa16.97■□□□□ 0.31
SIPA1-203ENST00000527525 DPCR1Q3MIW9 517 aa16.97■□□□□ 0.31
SIPA1-203ENST00000527525 HHIPL2Q6UWX4 724 aa16.97■□□□□ 0.31
SIPA1-203ENST00000527525 PAXIP1Q6ZW49 1069 aaPredicted RBP16.97■□□□□ 0.31
SIPA1-203ENST00000527525 ANAPC4Q9UJX5 808 aa16.97■□□□□ 0.31
SIPA1-203ENST00000527525 WNT10BO00744 389 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 CCZ1BP86790 482 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 CCZ1P86791 482 aaPredicted RBP16.96■□□□□ 0.31
SIPA1-203ENST00000527525 RCSD1Q6JBY9 416 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 A0A1B0GUL6 1792 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 BTBD18B2RXH4 712 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 KIF28PB7ZC32 967 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 LIFRP42702 1097 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 KRT40Q6A162 431 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 TICAM2Q86XR7 235 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 MNS1Q8NEH6 495 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 ZNF70Q9UC06 446 aaPredicted RBP16.96■□□□□ 0.31
SIPA1-203ENST00000527525 CCDC66A2RUB6 948 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 USP17L5A8MUK1 530 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 SFPQP23246 707 aaKnown RBP eCLIP16.96■□□□□ 0.31
SIPA1-203ENST00000527525 MARCKSP29966 332 aaPredicted RBP16.96■□□□□ 0.31
SIPA1-203ENST00000527525 RESTQ13127 1097 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 CERKLQ49MI3 558 aaPredicted RBP16.96■□□□□ 0.31
SIPA1-203ENST00000527525 SBK1Q52WX2 424 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 SRBD1Q8N5C6 995 aaKnown RBP16.96■□□□□ 0.31
SIPA1-203ENST00000527525 RASGRP4Q8TDF6 673 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 FAM163AQ96GL9 167 aaPredicted RBP16.96■□□□□ 0.31
SIPA1-203ENST00000527525 TIGD1Q96MW7 591 aa16.96■□□□□ 0.31
SIPA1-203ENST00000527525 ELP1O95163 1332 aa16.96■□□□□ 0.3
SIPA1-203ENST00000527525 GH2P01242 217 aa16.95■□□□□ 0.3
SIPA1-203ENST00000527525 YBX3P16989 372 aaKnown RBP eCLIP16.95■□□□□ 0.38e-7■■□□□ 12.2
SIPA1-203ENST00000527525 ZNF526Q8TF50 670 aaPredicted RBP16.95■□□□□ 0.3
SIPA1-203ENST00000527525 ADAMTSL1Q8N6G6 1762 aa16.95■□□□□ 0.3
SIPA1-203ENST00000527525 FAM205CA6NFA0 338 aa16.95■□□□□ 0.3
SIPA1-203ENST00000527525 VIL1P09327 827 aaKnown RBP16.95■□□□□ 0.3
SIPA1-203ENST00000527525 EPS15P42566 896 aa16.95■□□□□ 0.3
SIPA1-203ENST00000527525 CLCN6P51797 869 aa16.95■□□□□ 0.3
SIPA1-203ENST00000527525 NOM1Q5C9Z4 860 aaKnown RBP16.95■□□□□ 0.3
SIPA1-203ENST00000527525 CERS3Q8IU89 383 aa16.95■□□□□ 0.3
SIPA1-203ENST00000527525 DHX40Q8IX18 779 aaKnown RBP16.95■□□□□ 0.3
SIPA1-203ENST00000527525 OXER1Q8TDS5 423 aa16.95■□□□□ 0.3
SIPA1-203ENST00000527525 ERO1AQ96HE7 468 aa16.95■□□□□ 0.3
SIPA1-203ENST00000527525 DNAJC18Q9H819 358 aa16.95■□□□□ 0.3
SIPA1-203ENST00000527525 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.95■□□□□ 0.3
SIPA1-203ENST00000527525 MYOZ2Q9NPC6 264 aa16.95■□□□□ 0.3
SIPA1-203ENST00000527525 MYO1BO43795 1136 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms