RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 TTLL1O95922 423 aa20.51■□□□□ 0.87
LTBP3-208ENST00000527339 NT5C2P49902 561 aa20.51■□□□□ 0.87
LTBP3-208ENST00000527339 HERVK_113P62684 666 aa20.51■□□□□ 0.87
LTBP3-208ENST00000527339 UBXN2AP68543 259 aa20.51■□□□□ 0.87
LTBP3-208ENST00000527339 FAM110CQ1W6H9 321 aa20.51■□□□□ 0.87
LTBP3-208ENST00000527339 MKL1Q969V6 931 aa20.51■□□□□ 0.87
LTBP3-208ENST00000527339 P2RX7Q99572 595 aaKnown RBP20.51■□□□□ 0.87
LTBP3-208ENST00000527339 ESYT1Q9BSJ8 1104 aa20.51■□□□□ 0.87
LTBP3-208ENST00000527339 CLIP2Q9UDT6 1046 aa20.51■□□□□ 0.87
LTBP3-208ENST00000527339 SYNPO2Q9UMS6 1093 aa20.51■□□□□ 0.87
LTBP3-208ENST00000527339 ALPK3Q96L96 1907 aa20.51■□□□□ 0.87
LTBP3-208ENST00000527339 WDR46O15213 610 aaKnown RBP20.5■□□□□ 0.87
LTBP3-208ENST00000527339 CDC45O75419 566 aa20.5■□□□□ 0.87
LTBP3-208ENST00000527339 PTH1RQ03431 593 aa20.5■□□□□ 0.87
LTBP3-208ENST00000527339 RRP12Q5JTH9 1297 aaKnown RBP20.5■□□□□ 0.87
LTBP3-208ENST00000527339 KIAA1755Q5JYT7 1200 aa20.5■□□□□ 0.87
LTBP3-208ENST00000527339 CASC1Q6TDU7 716 aa20.5■□□□□ 0.87
LTBP3-208ENST00000527339 ANKRD13CQ8N6S4 541 aa20.5■□□□□ 0.87
LTBP3-208ENST00000527339 U3KPZ7 1027 aaPredicted RBP20.5■□□□□ 0.87
LTBP3-208ENST00000527339 SOX1O00570 391 aaPredicted RBP20.49■□□□□ 0.87
LTBP3-208ENST00000527339 KIAA1211Q6ZU35 1233 aa20.49■□□□□ 0.87
LTBP3-208ENST00000527339 SPICE1Q8N0Z3 855 aa20.49■□□□□ 0.87
LTBP3-208ENST00000527339 DEFB118Q96PH6 123 aa20.49■□□□□ 0.87
LTBP3-208ENST00000527339 HTATIP2Q9BUP3 242 aa20.49■□□□□ 0.87
LTBP3-208ENST00000527339 TANGO6Q9C0B7 1094 aa20.49■□□□□ 0.87
LTBP3-208ENST00000527339 NEDD4P46934 1319 aa20.49■□□□□ 0.87
LTBP3-208ENST00000527339 A0A0G2JMZ2 1700 aa20.48■□□□□ 0.87
LTBP3-208ENST00000527339 TNPO2O14787 897 aaKnown RBP20.48■□□□□ 0.87
LTBP3-208ENST00000527339 IRF5Q13568 498 aa20.48■□□□□ 0.87
LTBP3-208ENST00000527339 LBX2Q6XYB7 198 aa20.48■□□□□ 0.87
LTBP3-208ENST00000527339 PXYLP1Q8TE99 480 aa20.48■□□□□ 0.87
LTBP3-208ENST00000527339 DIS3LQ8TF46 1054 aaKnown RBP20.48■□□□□ 0.87
LTBP3-208ENST00000527339 ESR2Q92731 530 aa20.48■□□□□ 0.87
LTBP3-208ENST00000527339 MAP4K1Q92918 833 aa20.48■□□□□ 0.87
LTBP3-208ENST00000527339 PAK6Q9NQU5 681 aaPredicted RBP20.48■□□□□ 0.87
LTBP3-208ENST00000527339 IL17RBQ9NRM6 502 aa20.48■□□□□ 0.87
LTBP3-208ENST00000527339 TCP11L1Q9NUJ3 509 aa20.48■□□□□ 0.87
LTBP3-208ENST00000527339 MORF4L1Q9UBU8 362 aa20.48■□□□□ 0.87
LTBP3-208ENST00000527339 F5H6K3 240 aa20.47■□□□□ 0.87
LTBP3-208ENST00000527339 KLRC3Q07444 240 aa20.47■□□□□ 0.87
LTBP3-208ENST00000527339 COG2Q14746 738 aa20.47■□□□□ 0.87
LTBP3-208ENST00000527339 CRISPLD2Q9H0B8 497 aa20.47■□□□□ 0.87
LTBP3-208ENST00000527339 CNNM2Q9H8M5 875 aa20.47■□□□□ 0.87
LTBP3-208ENST00000527339 STX8Q9UNK0 236 aa20.47■□□□□ 0.87
LTBP3-208ENST00000527339 SPDYE16A6NNV3 312 aaPredicted RBP20.46■□□□□ 0.87
LTBP3-208ENST00000527339 RAD21O60216 631 aa20.46■□□□□ 0.87
LTBP3-208ENST00000527339 NMT2O60551 498 aa20.46■□□□□ 0.87
LTBP3-208ENST00000527339 NOVP48745 357 aa20.46■□□□□ 0.87
LTBP3-208ENST00000527339 GMCL1P1Q8NEA9 526 aa20.46■□□□□ 0.87
LTBP3-208ENST00000527339 KRT23Q9C075 422 aa20.46■□□□□ 0.87
LTBP3-208ENST00000527339 LSG1Q9H089 658 aaKnown RBP20.46■□□□□ 0.87
LTBP3-208ENST00000527339 HOXC10Q9NYD6 342 aa20.46■□□□□ 0.87
LTBP3-208ENST00000527339 RABGAP1Q9Y3P9 1069 aa20.46■□□□□ 0.87
LTBP3-208ENST00000527339 COL11A1P12107 1806 aaPredicted RBP20.46■□□□□ 0.87
LTBP3-208ENST00000527339 PEX10O60683 326 aa20.45■□□□□ 0.86
LTBP3-208ENST00000527339 NDUFB10O96000 172 aa20.45■□□□□ 0.86
LTBP3-208ENST00000527339 TFRCP02786 760 aaKnown RBP20.45■□□□□ 0.86
LTBP3-208ENST00000527339 CYP21A2P08686 494 aa20.45■□□□□ 0.86
LTBP3-208ENST00000527339 TRIM32Q13049 653 aa20.45■□□□□ 0.86
LTBP3-208ENST00000527339 LRRC47Q8N1G4 583 aaKnown RBP20.45■□□□□ 0.86
LTBP3-208ENST00000527339 GPRC5AQ8NFJ5 357 aa20.45■□□□□ 0.86
LTBP3-208ENST00000527339 LRCH3Q96II8 777 aa20.45■□□□□ 0.86
LTBP3-208ENST00000527339 PAWRQ96IZ0 340 aaKnown RBP20.45■□□□□ 0.86
LTBP3-208ENST00000527339 TXNRD2Q9NNW7 524 aa20.45■□□□□ 0.86
LTBP3-208ENST00000527339 RBPJLQ9UBG7 517 aa20.45■□□□□ 0.86
LTBP3-208ENST00000527339 RBM8AQ9Y5S9 174 aaKnown RBP20.45■□□□□ 0.86
LTBP3-208ENST00000527339 NR2E3Q9Y5X4 410 aa20.45■□□□□ 0.86
LTBP3-208ENST00000527339 LAMA2P24043 3122 aaKnown RBP20.44■□□□□ 0.86
LTBP3-208ENST00000527339 FLOT1O75955 427 aa20.44■□□□□ 0.86
LTBP3-208ENST00000527339 ERVK-9P63128 1117 aa20.44■□□□□ 0.86
LTBP3-208ENST00000527339 ERVK-24P63145 666 aa20.44■□□□□ 0.86
LTBP3-208ENST00000527339 FAM83BQ5T0W9 1011 aa20.44■□□□□ 0.86
LTBP3-208ENST00000527339 PAGR1Q9BTK6 254 aa20.44■□□□□ 0.86
LTBP3-208ENST00000527339 ANO2Q9NQ90 1003 aa20.44■□□□□ 0.86
LTBP3-208ENST00000527339 GJD2Q9UKL4 321 aa20.44■□□□□ 0.86
LTBP3-208ENST00000527339 B4E1Z4 1266 aa20.43■□□□□ 0.86
LTBP3-208ENST00000527339 EVI5O60447 810 aa20.43■□□□□ 0.86
LTBP3-208ENST00000527339 KDM4AO75164 1064 aa20.43■□□□□ 0.86
LTBP3-208ENST00000527339 DSG3P32926 999 aa20.43■□□□□ 0.86
LTBP3-208ENST00000527339 MNX1P50219 401 aaPredicted RBP20.43■□□□□ 0.86
LTBP3-208ENST00000527339 CCDC178Q5BJE1 867 aa20.43■□□□□ 0.86
LTBP3-208ENST00000527339 POTEEQ6S8J3 1075 aa20.43■□□□□ 0.86
LTBP3-208ENST00000527339 IQCA1Q86XH1 822 aa20.43■□□□□ 0.86
LTBP3-208ENST00000527339 TTC14Q96N46 770 aa20.43■□□□□ 0.86
LTBP3-208ENST00000527339 DNAH12Q6ZR08 3092 aa20.43■□□□□ 0.86
LTBP3-208ENST00000527339 PLXNB2O15031 1838 aa20.43■□□□□ 0.86
LTBP3-208ENST00000527339 CNMDO75829 334 aa20.42■□□□□ 0.86
LTBP3-208ENST00000527339 TRDNQ13061 729 aa20.42■□□□□ 0.86
LTBP3-208ENST00000527339 SLFN13Q68D06 897 aa20.42■□□□□ 0.86
LTBP3-208ENST00000527339 MB21D1Q8N884 522 aa20.42■□□□□ 0.86
LTBP3-208ENST00000527339 GMCL1Q96IK5 515 aa20.42■□□□□ 0.86
LTBP3-208ENST00000527339 NUP88Q99567 741 aaPredicted RBP20.42■□□□□ 0.86
LTBP3-208ENST00000527339 CUL9Q8IWT3 2517 aa20.42■□□□□ 0.86
LTBP3-208ENST00000527339 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
LTBP3-208ENST00000527339 CCNA1P78396 465 aa20.41■□□□□ 0.86
LTBP3-208ENST00000527339 Q3C1V9 767 aa20.41■□□□□ 0.86
LTBP3-208ENST00000527339 COA7Q96BR5 231 aa20.41■□□□□ 0.86
LTBP3-208ENST00000527339 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.41■□□□□ 0.868e-6■□□□□ 10.8
LTBP3-208ENST00000527339 FBXO28Q9NVF7 368 aa20.41■□□□□ 0.86
LTBP3-208ENST00000527339 ZSWIM5Q9P217 1185 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms