RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 GTF2IP78347 998 aa13.6□□□□□ -0.23
CHMP1B-201ENST00000526991 MORC3Q14149 939 aa13.6□□□□□ -0.23
CHMP1B-201ENST00000526991 CRNKL1Q9BZJ0 848 aaKnown RBP13.6□□□□□ -0.23
CHMP1B-201ENST00000526991 KCNQ5Q9NR82 932 aa13.6□□□□□ -0.23
CHMP1B-201ENST00000526991 COL5A3P25940 1745 aaPredicted RBP13.6□□□□□ -0.23
CHMP1B-201ENST00000526991 FAM237AA0A1B0GTK4 181 aa13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 XBP1P17861 261 aa13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 ST5P78524 1137 aa13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 MFSD14BQ5SR56 506 aa13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 TRIM65Q6PJ69 517 aa13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 ZNF771Q7L3S4 317 aaPredicted RBP13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.234e-6■□□□□ 9.9
CHMP1B-201ENST00000526991 PAGE5Q96GU1 130 aa13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 ZNF446Q9NWS9 450 aa13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 DDX41Q9UJV9 622 aaKnown RBP13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 TFAP4Q01664 338 aa13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 SPECC1LQ69YQ0 1117 aa13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 TC2NQ8N9U0 490 aa13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 LRP5O75197 1615 aa13.59□□□□□ -0.23
CHMP1B-201ENST00000526991 PES1O00541 588 aaKnown RBP13.58□□□□□ -0.23
CHMP1B-201ENST00000526991 TROAPQ12815 778 aa13.58□□□□□ -0.23
CHMP1B-201ENST00000526991 TTC38Q5R3I4 469 aa13.58□□□□□ -0.23
CHMP1B-201ENST00000526991 RNF26Q9BY78 433 aaPredicted RBP13.58□□□□□ -0.23
CHMP1B-201ENST00000526991 MKNK2Q9HBH9 465 aa13.58□□□□□ -0.23
CHMP1B-201ENST00000526991 CEP131Q9UPN4 1083 aa13.58□□□□□ -0.23
CHMP1B-201ENST00000526991 CTNND2Q9UQB3 1225 aa13.58□□□□□ -0.23
CHMP1B-201ENST00000526991 TNRC6CQ9HCJ0 1690 aaKnown RBP13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 SEC31AO94979 1220 aaKnown RBP13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 DPYDQ12882 1025 aa13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 TMEM139Q8IV31 216 aa13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 MLKLQ8NB16 471 aa13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 CTCFLQ8NI51 663 aaPredicted RBP13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 UBXN4Q92575 508 aa13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 TFRCP02786 760 aaKnown RBP13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 CACNB3P54284 484 aa13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 FUT2Q10981 343 aa13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 RASSF8Q8NHQ8 419 aa13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 PHF20Q9BVI0 1012 aa13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 VAT1LQ9HCJ6 419 aa13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 CD209Q9NNX6 404 aa13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 PCDHAC2Q9Y5I4 1007 aa13.58□□□□□ -0.24
CHMP1B-201ENST00000526991 KIF2AO00139 706 aaPredicted RBP13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 SARSP49591 514 aaKnown RBP13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 RBL2Q08999 1139 aa13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 TEX35Q5T0J7 233 aa13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 STAG2Q8N3U4 1231 aa13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 FEZ1Q99689 392 aa13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 VPS16Q9H269 839 aa13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 GGA1Q9UJY5 639 aa13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 XDHP47989 1333 aa13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 PP2D1A8MPX8 630 aa13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 ZNF18P17022 549 aa13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 COL23A1Q86Y22 540 aaPredicted RBP13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 ENOX1Q8TC92 643 aaKnown RBP13.57□□□□□ -0.24
CHMP1B-201ENST00000526991 BTDP43251 543 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 CLCN6P51797 869 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 SYCP1Q15431 976 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 RRAGBQ5VZM2 374 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 IGSF22Q8N9C0 903 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 UIMC1Q96RL1 719 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 PDGFDQ9GZP0 370 aaPredicted RBP13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 MRPL44Q9H9J2 332 aaKnown RBP13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 L2HGDHQ9H9P8 463 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 SYNRGQ9UMZ2 1314 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 CLGNO14967 610 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 MMP10P09238 476 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 CUL4BQ13620 913 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 TMTC3Q6ZXV5 915 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 DBNDD1Q9H9R9 158 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 BRMS1Q9HCU9 246 aa13.56□□□□□ -0.24
CHMP1B-201ENST00000526991 FAM196BA6NMK8 535 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 ARHGAP6O43182 974 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 PRPF3O43395 683 aaKnown RBP13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 KIF20AO95235 890 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 CASQ1P31415 396 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 CCDC93Q567U6 631 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 ZNF804AQ7Z570 1209 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 TRIM34Q9BYJ4 488 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 DACH1Q9UI36 760 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 LAMB2P55268 1798 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 CACNA1SQ13698 1873 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 G3V3G9 751 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 ZSCAN12O43309 604 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 SLFN14P0C7P3 912 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 ATP2B2Q01814 1243 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 NPY5RQ15761 445 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 IL17AQ16552 155 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 PPFIBP1Q86W92 1011 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 GPIHBP1Q8IV16 184 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 TAB2Q9NYJ8 693 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 PARP3Q9Y6F1 533 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 LOC102724159A0A0B4J2E5 919 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 POLRMTO00411 1230 aaKnown RBP13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 ABL1P00519 1130 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 DHX8Q14562 1220 aaKnown RBP13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 PWP2Q15269 919 aaKnown RBP13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 TBC1D16Q8TBP0 767 aa13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 CCDC12Q8WUD4 166 aaPredicted RBP13.55□□□□□ -0.24
CHMP1B-201ENST00000526991 GDAQ9Y2T3 454 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms